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利用siRNA高通量测序技术检测烟草病毒 被引量:9

Detection for RNA viruses in tobacco by High-throughput sequencing of siRNA
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摘要 烟草是我国的主要经济作物之一,病毒病是烟草生产上的重要病害。常见的烟草病毒主要有马铃薯Y病毒(Potato virus Y,PVY)、黄瓜花叶病毒(Cucumber mosaic virus,CMV)、烟草花叶病毒(Tobacco mosaic virus,TMV)、烟草脉带花叶病毒(Tobacco vein banding mosaic virus,TVMBV)等。此外,近年来在烟草上还发生一些新的病毒病害, Plant obtains immunity against RNA virus through small interference RNA (siRNA) mechanism, we adopt next-generation sequencing technology to perform high throughput sequencing of tabacco siRNA and screening for RNA virus sequences with bioinformatics methods. We found that PVY, CMV, TMV, TVBMV and other virus genomic information in Anhui Province. This research established a new strategy to find naturally RNA viruses in tobacco, and this strategy could be applied to virus surveillance in tobacco.
出处 《植物病理学报》 CAS CSCD 北大核心 2015年第1期97-100,共4页 Acta Phytopathologica Sinica
基金 安徽省烟草公司科技攻关项目"安徽省烟草有害生物调查研究"(20100551005) 公益性行业(农业)科研专项经费资助(201203091)
关键词 烟草病毒 SIRNA 技术检测 高通量 MOSAIC VIRUS 黄瓜花叶病毒 测序 high-throughput sequencing small interference RNA detection virus
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参考文献5

  • 1Gao R. Construction of an infectious cDNA clone of Tobacco vein banding mosaic virus and its use for cross-protection, protein over-expression and VIGS [D]. Taian:Shandong Agricultural University (山东农业大学), 2012.
  • 2Ding M, Yang C, Zhang L, et al. Occurrence of Chilli veinal mottle virus in Nicotiana tabacum in Yunnan, China [J]. Plant Disease, 2011, 95(3): 357.
  • 3Cai J H, Qin B X, Wei X P, et al. Molecular identification and characterization of Tomato zonate spot virus in tobacco in Guangxi, China [J]. Plant Disease, 2011, 95(11): 1483.
  • 4Dong J H, Yin Y Y, Xu X Y, et al. First report of Tomato spotted wilt virus in tomato and tobacco in China [J]. Journal of Plant Pathology, 2010, 92 (4): 107-122.
  • 5Wu Q, Luo Y, Lu R, et al. Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs [J]. Proc. Natl. Acad. Sci. U S A,2010,107(4): 1606-1611.

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