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利用多重聚合酶链反应和多色毛细管电泳分析布氏菌多位点可变数目串联重复序列 被引量:7

MLVA-16 loci panel on Brucellaspp.using multiplex PCR and multicolor capillary electrophoresis
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摘要 目的传统的布鲁氏菌多点可变数目串联重复序列分析方法涉及16个位点(MLVA-16),包括单重聚合酶链反应和琼脂糖凝胶电泳,一直以来都作为标准的基因分型方法,用于布病的病原监测和流行病学调查。然而,目前这种传统方法工作量较大,实验室间结果不宜比较;尤其是对大规模菌株进行基因分型或面临突发疫情时,急需一种高通量且快速的方法。方法用多重PCR和多色毛细管电泳方法建立一种可靠的,高通量的且自动化程度较高的MLVA-16改良分型系统,用82株菌进行测试。结果这种改良的MLVA-16分型系统具有很高的准确性,且具有快速和高通量的特点。结论改良的MLVA-16分型系统可用于基层布病实验室,为布病的病原监测提供高效的工具。 The Multi Locus Variable Number Tandem Repeat Analysis 16 loci panel (MLVA-16), involving singleplex PCRs and agarose gel electrophoresis, is the standard genotyping method for Brucella spp. used also for the Brucella interna- tional online database. To find a rapid and through-put genotyping method, modified MLVA-16 can be used. We described an alternative, reliable, high-throughput MLVA-16 protocol using multiplex PCRs and multicolor capillary electrophoresis. Fur- thermore, 82 Brucella strains were tested. Results showed that the modified MLVA-16 has proved to be accurate, rapid and throughput. It's indicated that the modified MLVA-16 is highly discriminatory and epidemiological concordance and is easy for brucellosis surveillance in province-level laboratory.
出处 《中国人兽共患病学报》 CAS CSCD 北大核心 2015年第4期303-310,共8页 Chinese Journal of Zoonoses
基金 国家自然科学基金(No.81271900) 国家卫生计生委公益性行业科研专项(No.201302006) 重大专项(No.2012ZX10004215)~~
关键词 多重PCR 多色毛细管电泳 布鲁氏菌 基因分型 multiplex PCR multicolor capillary electrophoresis Brucella genotyping
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  • 1Gvizdic S, Cengic D, Bratic M, et al. Brucella melltemis : review of the human infection case[J]. Bosh J Basic Med Sci, 2006, 6(1): 15-18.
  • 2崔步云.中国布鲁氏菌病疫情监测与控制[J].疾病监测,2007,22(10):649-651. 被引量:348
  • 3Scholz HC, Hubalek Z, Sedlacek I, et al. Brucella microti sp. nov., isolated from the common vole Microtus arvalis [J]. Int J Syst Evol Microbiol, 2008, 58: 375-382. doi:10.1099/ijs.0.65356-0.
  • 4Scholz HC, Nockler K, Gollner C, et al. Brucella inopinata sp. nov., isolated from a breast implant infection[J]. Int J Syst Evol Microbiol, 2010, 60: 801-808. doi:10.1099/ijs.0.011148-0.
  • 5AI Dabouk S, Tomaso H, Prenger-Beminghoff E, et al. Identification of Brucella species and biotypes using polymerase chain reaction-restriction fragment length polymorphism (PERRFLP)[J]. Crit Rev Microbiol, 2005, 31(4): 191-196.
  • 6Mercier E, Jumas-Bilak E, Allardet-Servent A, et al. Polymorphism in Brucella strains detected by studying distribution of two short repetitive DNA elements[J]. J Clin Microbiol, 1996, 34(5): 1299-1302.
  • 7Tcherneva E, Rijpens N, Naydensky C, et al. Repetitive element sequence based polymerase chain reaction for typing of Brucella strains[J]. Vet Microbiol, 1996, 51(1-2): 169-178.
  • 8Tcherneva E, Rijpens N, Jersek B, et al. Differentiation of Brucella species by random amplified polymorphic DNA analysis[J]. J Appl Microbiol, 2000, 88(1): 69-80.
  • 9Whatmore AM, Murphy TJ, Shankster S,et al. Use of amplified fragment length polymorphism to identify and type Brucella isolates of medical and veterinaryinterest[J]. J Clin Microbiol, 2005, 43(2): 761-769.
  • 10Whatmore AM, Perrett LL, MacMillan AP. Characterisation of the genetic diversity of Brucella by multilocus sequencing[J]. BMC Microbiol, 2007, 20(7): 34.

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  • 1崔步云.中国布鲁氏菌病疫情监测与控制[J].疾病监测,2007,22(10):649-651. 被引量:348
  • 2Baud D, Greub G. Intracellular bacteria and adverse pregnancy outcomes[J]. Clin Microbiol Infect, 2011, 17(9): 1312- 1322.
  • 3Meirelles-Bartoli RB, Mathias LA, Samartino LE. Brucellosis due to Brucella suis in a swine herd associated with a human clin- ical case in the State of Sao Paulo, Brazil[ J]. Trop Anim Health Prod,2012,44(7) : 1575 - 1579.
  • 4Hoyer BH, McCullough NB. Homologies of deoxyribonucleic acids from Brucella ovis, canine abortion organisms, and other Brucella species[J]. J Bacteriol, 1968, 96(5) : 1783 -1790.
  • 5Jia P,Joyner A. Human brucellosis occurrences in Inner Mongolia, China: a spatio-temporal distribution and ecological nichemodeling approach[J]. BMC Infect Dis, 2015, 2(3) : 15 -36.
  • 6AI-Attar S, Westra ER, van der Oost J,et al. Clustered regularly interspaced short palindromic repeats (CRISPRs) : the hallmark of an ingenious antiviral defense mechanism in prokaryotes [ J]. Biol Chem, 2011,392(4) :277 -289.
  • 7Jiang H, Wang H, Xu L, et al. MLVA genotyping of Brucella melitensis and Brucella ubortus isolates from different animal spe- cies and humans and identification of Bracella suis vaccine strain $2 from cattle in China[J]. PLoS One,2013,8(10) :e76332.
  • 8Tortes-Cruz J, van der Woude MW. Slipped-strand mispairing can function as a phase variation mechanism in Escherichia coli [J]. J Bacteriol, 2003,185(23) : 6990 -6994.
  • 9Yu Y, Hu W, Wu B, et al. Vibrio parahaemolyticus isolates from southeastern Chinese coast are genetically diverse with circulation of clonal complex 3 strains since 2002 [ J]. Foodboruc Pathog Dis, 2011,8(11) :1169 -1176.
  • 10Wise KS, Foecking MF, Ri~ske K, et al. Distinctive repertoire of contingency genes conferring mutation-based phase variation and combinatorial expression of surface lipoproteins in Mycoplasma capricolum subsp, capricolum of the Mycoplusma mycoides phylo- genetic cluster[ J]. J Bacteriol, 2006, 188(13) : 4926 -4941.

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