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2011-2014年青岛地区甲型H3N2流感病毒基因进化分析 被引量:3

Phylogenetic analysis of influenza A (H3N2) virus in Qingdao from 2011 to 2014
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摘要 目的 了解2011-2014年青岛地区人群甲型H3N2流感病毒流行株基因进化及抗原变异趋势.方法 选取2011-2014年间青岛地区流行的甲型H3N2流感病毒64株,提取病毒RNA,应用逆转录聚合酶链反应(RT-PCR)扩增HA、NA、MP 3个基因片段,并进行序列测定,对各基因片段进行系统发育分析及基因和氨基酸位点变异分析.结果 HA进化树分析表明,甲型H3N2流感病毒基本上分为三大分支,并且每个分支与当年的疫苗株都不在同一分支上;HA1蛋白抗原决定簇共有8个位点发生了变化;NA蛋白酶活性中心及周围相关位点氨基酸组成保守,未检测到耐奥司他韦和扎那米韦的变异位点.M2蛋白均发生S31N突变.结论 2011-2014年青岛地区流行的H3N2流感病毒在持续不断地发生基因变异而产生抗原漂移;毒株全部为烷胺类药物耐药株,但对神经氨酸酶抑制剂敏感. Objective To study the prevalence and variation of influenza A (H3N2) viruses circulating in Qingdao from 2011 to 2014.Methods RNA of 64 influenza A/H3N2 virus isolates circulated in Qingdao from 2011 to 2014 was extracted.HA,NA and MP segments were amplified and sequenced.Each sequence data was analyzed using Sequencher,phylogenetic analysis using the MEGA5.0.Results HA1 gene phylogenetic tree analysis showed that there was three branches in 2011-2012,2012-2013,2013-2014 respectively,and each branch had nohomology with the vaccine strains of the same year.Compared with the vaccine strains,eight antigen sites were substituted in HA1 area;Residues at the enzyme active sites of NA protein were strictly conservative,and no change was observed in amino acid residues which were related to drug resistance against osehamivir and zanamivir.All the isolations had a S31N mutation in M2 protein.Conclusions All the A H3N2 influenza virus circulated in Qingdao from 2011 to 2014 presented continual variation and therefore caused antigenic drift.All the isolations were adamantane-resistance,but susceptible to inhibitors of neruaminidase.
出处 《国际病毒学杂志》 2015年第2期99-105,共7页 International Journal of Virology
基金 青岛市公共领域科技支撑计划项目(10-3-3-8-1-nsh)
关键词 H3N2流感病毒 HA基因 NA基因 基因进化分析 H3N2 influenza virus HA gene NA gene Phylogenetic analysis
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参考文献17

  • 1郭元吉,流感性感冒及实验技术[M].北京:中国三峡出版社.1997,1-55.
  • 2杜宁,杨霄星,蓝雨,温乐英,李晓丹,高荣保,郭元吉,李德新,舒跃龙.1968年香港流感(H3N2)病原学概述[J].病毒学报,2009,25(B05):17-20. 被引量:14
  • 3Rappuoli R, Dormitzer PR. Influenza: options to improve pan- demic preparation[ J]. Science, 2012, 336(6088) : 1531-1533.
  • 4Hoffmann E, Stech J, Guan Y, et al. Universal primer set for the full-length amplification of all influenza A viruses[ J]. Arch Virol, 2001, 146(12) : 2275-2289.
  • 5Abe Y, Takashita E, Sugawara K, et al. Effect of the addition of oligo-saccharides on the biological activities and antigenicity of in- fluenza A /H3N2 virus hemagglutinin [J]. J Virol, 2004, 78 (18) : 9605-9611.
  • 6Weis W, Brown JH, Cusack S, et al. Structure of the influenza virus hemagglutinin complexed with its receptor, sialic acid [ J]. Nature, 1988, 333(6172 ) : 326-431.
  • 7Wiley DC, Skehel JJ. The structure and function of the hemagglu- tinin membrane glycoprotein of influenza virus [ J]. Annu Rev, Biochem, 1987, 56: 365-394.
  • 8Colman PM, Varghese JN, Laver WG. Structure of the catalytic and antigenic sites in influenza virus neuraminidase[ J]. Nature, 1983, 303(5912) : 41-44.
  • 9Gubareva LV. Molecular mechanisms of influenza virus resistance to neuraminidase inhibitors [ J ]. Virus Res, 2004, 103 ( 1-2 ) : 199-203.
  • 10Shu YL, Fang LQ, de Vlas S J, et al. Dual Seasonal Patterns for Influenza[ J]. China Emerg Infect Dis, 2010, 16(4) : 725-726.

二级参考文献47

  • 1Cockburn W C, Delon P J, Ferreira W. Origin and progress of the 1968-69 Hong Kong influenza epidemic [J]. Bull World Health Organ, 1969, 41:345-348.
  • 2Longini I M Jr, Fine P E, Thacker S B. Predicting the global spread of new infectious agents [J].Am J Epidemiol, 1986, 123: 383-391.
  • 3Schulman J L, Kilbourne E D. Independent variation in nature of the hemagglutinin and neuraminidase antigens of influenza virus: distinctiveness of the hemagglutinin antigen of Hong Kong-68 virus [J].Proc Natl Acad Sci U S A, 1969, 63. 326-333.
  • 4Stuart-Harris C. Epidemiology of influenza in man [J]. Br Med Bull, 1979, 35: 3-8.
  • 5Monto A S, Kendal A P. Effect of neuraminidase antibody on Hong Kong influenza [J]. Lancet, 1973, 1: 623-625.
  • 6Viboud C, Grais R F, Lafont B A, et al. Multinational impact of the 1968 Hong Kong pan demic, evidence for a smoldering pandemic [J].J Infect Dis, 2005, 192: 223-248.
  • 7Miller D L, Pereira M S, Clarke M. Epidemiology of the Hong Kong 68 variant of influenza A2 in Britain[J]. Br Med J, 1971, 1: 475- 479.
  • 8Stuart-Harris C H. Pandemic influenza.- an unresolved problem in prevention [J]. J Infect Dis, 1970, 122: 108-115.
  • 9Noble G R. Epidemiological and clinical aspects of influenza. In basic and applied influenza research [M]. ed. AS Beare, Boca Raton,FL: CRC. 1982: 11-50.
  • 10Stephen E L, Nancy J C, Alexander K. Evolutionary analysis of human H2N2 and early H3N diver H2N influenza viruses., evidence for genetic ence and multiple reassortment among and/or H3N2 viruses [J]. Int Congr,2004, 1263: 184-190.

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