期刊文献+

真核细胞中多重表达框mRNA的选择性翻译起始(英文) 被引量:1

Alternative Translation Initiation of Multicistronic mRNA in Eukaryotic Cells
下载PDF
导出
摘要 扫描模型和遗漏扫描模型是真核生物m RNA翻译起始的两种主要机制,但其仍存在某些例外情况,如对具有多顺反子结构的m RNA,选择性翻译起始的发生机制目前仍不清楚.本研究基于GFP蛋白开放表达框(ORF)构建了一系列重组表达载体,用以转录在移码翻译顺序及同一翻译顺序下,AUG起始密码子处于不同序列背景,以及间隔不同距离的多顺反子结构m RNA.通过转染人Bel-7402细胞系,研究了这些多顺反子结构m RNA的翻译起始模式.结果表明,在移码翻译顺序下,多顺反子m RNA可翻译出对应的不同蛋白质,而在同一翻译顺序下,GFP蛋白表达框中的多个AUG密码子,仅有首位起始密码子可发挥作用,提示核糖体在从首位起始密码子开始翻译的同时,可能会有部分核糖体继续向下扫描并识别下游的起始密码子,而这种选择性的翻译起始效率,主要取决于密码子所处的序列背景及间隔距离等因素. The scanning and leaky scanning paradigms of eukaryotic translation initiation are widely accepted,although numerous exceptions have been reported. The incidence of alternative translation initiation for eukaryotic multicistronic mR NAs is still unknown. In the present study, multiple recombinant vectors containing a GFP open reading frame( ORF) were constructed to transcribe multicistronic mR NAs, including out-of-frame and in-frame downstream reading frames. Then, we assessed the translation initiation patterns of the multicistronic mR NAs,where the AUG triplets of reading forms were in different sequence contexts and varying distances apart from the authoritative initiation codon in eukaryotic cells. Our results demonstrated that a single multicistronic mR NA including out-offrame downstream reading frame could be translated into different proteins,with the first AUG triplet serving as the unique initiation codon in the in-frame multicistronic GFP mR NA. These findings suggested that some ribosomal subunits might keep moving forward and recognize the downstream AUG codons after recruitment by the authoritative translation initiation codon. The efficiency of the alternative translation initiation mainly depends on the sequence context and distance from the first initiation codon.
出处 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2015年第6期608-615,共8页 Chinese Journal of Biochemistry and Molecular Biology
基金 Supported by National Natural Science Foundation of China(No.81000782) the Scholarship Award for Excellent Doctoral Students granted by Ministry of Education of China(No.82601003)~~
关键词 翻译起始 扫描模型 核糖体 多顺反子mRNA translation initiation scanning model ribosome multicistronic mRNA
  • 相关文献

参考文献29

  • 1Pisareva V P, Pisarev A V. eIF5 and eIF5B together stimulate 48S initiation complex formation during ribosomal scanning [J]. Nucleic Acids Res, 2014, 42 (19): 12052-12069.
  • 2Erzberger J P, Stengel F, Pellarin R, et al. Molecular architecture of the 40S eIF1eIF3 translation initiation complex [J]. Cell, 2014, 158 (5): 1123-1135.
  • 3Jackson R J, Hellen C U, Pestova T V. The mechanism of eukaryotic translation initiation and principles of its regulation [J]. Nat Rev Mol Cell Biol, 2010, 11 (2): 113-127.
  • 4Kozak M. Pushing the limits of the scanning mechanism for initiation of translation [J]. Gene, 2002, 299 (1-2): 1-34.
  • 5Pisarev A V, Kolupaeva V G, Pisareva V P, et al. Specific functional interactions of nucleotides at key -3 and +4 positions flanking the initiation codon with components of the mammalian 48S translation initiation complex [J]. Genes Dev, 2006, 20 (5): 624-636.
  • 6Tatematsu K, Uchino K, Sezutsu H, et al. Effect of ATG initiation codon context motifs on the efficiency of translation of mRNA derived from exogenous genes in the transgenic silkworm, Bombyx mori [J]. Springerplus, 2014, 3: 136.
  • 7Volkova O A, Kochetov A V. Interrelations between the nucleotide context of human start AUG codon, N-end amino acids of the encoded protein and initiation of translation [J]. J Biomol Struct Dyn, 2010, 27 (5): 611- 618.
  • 8Michel A M, Andreev D E, Baranov P V. Computational approach for calculating the probability of eukaryotic translation initiation from ribo-seq data that takes into account leaky scanning [J]. BMC Bioinformatics, 2014, 15: 380.
  • 9Fritsch C, Herrmann A, Nothnagel M, et al. Genome-wide search for novel human uORFs and N-terminal protein extensions using ribosomal footprinting [J]. Genome Res, 2012, 22 (11): 2208-2218.
  • 10Schleich S, Strassburger K, Janiesch P C, et al. DENR-MCT-1 promotes translation re-initiation downstream of uORFs to control tissue growth [J]. Nature, 2014, 512 (7513): 208-212.

二级参考文献31

  • 1Holcik M,Sonenberg N.Translational control in stress and apoptosis[J].Nat Rev Mol Cell Biol,2005,6(4):318-327
  • 2Jang S K.Internal initiation:IRES elements of picornaviruses and hepatitis c virus[J].Virus Res,2006,119(1):2-15
  • 3Jang S K,Krausslich H G,Nicklin M J,et al.A segment of the 5'nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation[J].J Virol,1988,62:2636-2643
  • 4Pelletier J,Sonenberg N.Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA[J].Nature,1988,334(6180):320-325
  • 5Gale M Jr,Tan S L,Katze M G.Translational control of viral gene expression in eukaryotes[J].Microbiol Mol Biol Rev,2000,64(2):239-280
  • 6Pilipenko E V,Blinov V M,Chernov B K,et al.Conservation of the secondary structure elements of the 5'-untranslated region of cardio-and aphthovirus RNAs[J].Nucleic Acids Res,1989,17(14):5701-5711
  • 7Palmenberg A C,Sgro J-Y.Topological organization of picornaviral genomes:statistical prediction of RNA structural signals[J].Semin Virol,1997,8(3):231-241
  • 8Stewart S R,Semler B L.RNA determinants of picornavirus capindependent translation initiation[J].Semin Virol,1997,8(3):242-255
  • 9Piliponko E V,Gmyl A P,Maslova S V,et al.Prokaryotic-like cis elements in the cap-independent internal initiation of translation on picornavirus RNA[J].Cell,1992,68(1):119-131
  • 10Agol V I.The 5'-untranslated region of picornaviral genomes[J].Adv Virus Res,1991,40:103-180

共引文献14

同被引文献1

引证文献1

二级引证文献5

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部