期刊文献+

粉尘螨der f 28的抗原表位特征及三维结构分析

Analysis of the antigen epitope features and three-dimensional structure of dust mite der f 28
原文传递
导出
摘要 目的对粉尘螨的过敏原蛋白之一的der f 28的结构与性质进行生物信息方面的分析,为粉尘螨所导致的变态反应性疾病的诊断和治疗提供线索。方法通过对der f 28进行BLAST得到的相似序列进行构建进化树,同时对der f28的二级结构、亲水性区域、可塑性区域、抗原性区域进行分析。结果粉尘螨与其他微生物物种中的热休克蛋白70(HSP70)在进化上相似性不高。der f 28的主要抗原位点为24~39、93~103、150~163、202~205、244~281、414~434、450~484、551~605。Motif的预测表明der f 28具有热休克蛋白70家族的特征。其预测的三维结构基本能反应der f 28真实的空间构象。结论掌握der f 28结构和功能的的关系,对粉尘螨所引起的变态反应性疾病的诊断和治疗有临床意义。 Objective To analyze the biological information of the structure and properties of der f 28,one of the allergen proteins of the dust mite,hoping to provide clues for the diagnosis and therapy of dust mite allergy. Methods The phylogenetic tree was constructed by the similar sequence obtained by performing BLAST for der f 28. At the same time,the two level structure,the hydrophilic region,the plastic region and the antigenic region of der f 28 were analyzed. Results The similarity of dust mites and the heat shock protein 70( HSP70) in other microbial species is not high in the evolution. The major antigenic sites of der f 28 were mainly 24- 39,93- 103,150- 163,202- 205,244- 281,414- 434,450- 484,551- 605. Motif projections indicated der f 28 had the characteristics of heat shock protein 70 family. Its three- dimensional structure can basically predict the real conformation of der f 28. Conclusion To master the relationship between the structure and function of der f 28 has clinical significance for the diagnosis and treatment of allergic diseases caused by dust mites.
出处 《中国卫生检验杂志》 CAS 2016年第3期389-390,393,共3页 Chinese Journal of Health Laboratory Technology
关键词 粉尘螨 der F 28 抗原表位 三维结构建模 Dust mite der f 28 Antigenic epitope Three dimensional structure modeling
  • 相关文献

参考文献10

  • 1崔光斌,阮标,余咏梅.尘螨过敏原与过敏性疾病[J].云南医药,2014,35(4):491-493. 被引量:4
  • 2Gamier J, Osguthorpe DJ, Robson B. Analysis of the accuracy and implications of simple method for predicting the secondary structureof globular proteins[ J]. J Mol Biol, 1978, 120( 1 ) : 97 - 120.
  • 3Hopp TP. Methods for identifying antigenic determinants and other interaction sites [ J ]. J Immunol Methods, 1986, 88 ( 1 ) : 1 - 18.
  • 4Hopp TP. Retrospective: 12 years of antigenic determinant predic- tions and more[J]. Pept Res, 1993, 6(4) : 183 -190.
  • 5Karplus PA, Schulz GE. Prediction of chain flexibility in proteins a tool for the selection of peptide antigens [ J ]. Naturwissenschaften, 1985, 72(4) : 212 -213.
  • 6Jameson BA, Wolf H. The antigenic index: a novel algorithm for predicting antigenic determinants [ J]. Comput Appl Biosci, 1988, 4(1): 181-186.
  • 7胡玉静,金珊珊,杨海伟,魏继福,何韶衡.美洲大蠊Per a 9的抗原表位特征及三维结构建模[J].生物学杂志,2011,28(5):1-5. 被引量:4
  • 8Pedroza - Roldan C, Charles - Nifio C, Saavedra R, et al, Varia- ble epitope library - based vaccines : Shooting moving targets [J]. Mol Immunol, 2009, 47 (2/3) : 270 - 282.
  • 9宋帅,李春玲,贾爱卿,杨冬霞,李淼.抗原表位研究方法进展[J].动物医学进展,2010,31(12):87-91. 被引量:30
  • 10吴敬,吴梧桐.B细胞蛋白质抗原表位的研究方法进展[J].药物生物技术,2000,7(4):239-242. 被引量:25

二级参考文献64

  • 1来鲁华,徐筱杰,唐有祺.蛋白质的结构预测和分子设计[J].大学化学,1993,8(5):1-4. 被引量:15
  • 2吴玉章,朱锡华.蛋白质抗原表位的研究[J].科学(中文版),1994(1):93-94. 被引量:18
  • 3王成硕,张罗,韩德民,周兵,赵岩,王向东.北京地区变应性鼻炎患者吸入变应原谱分析[J].临床耳鼻咽喉科杂志,2006,20(5):204-207. 被引量:209
  • 4李冰峰.Pla a 1序列分析及三维结构建模[J].生物学杂志,2007,24(1):47-49. 被引量:4
  • 5Manpreet K,Hema C,Harpreet S,et al.Identification and characterization of immunodominant B-cell epitope of the Cterminus of protective antigen of Bacillus anthracis[J].Mol Immunol,2009,46(10):2107-2115.
  • 6Yu X L,Olga B,Mark B,et al.Identification of measles virus epitopes using an ultra-fast method of panning phage-displayed random peptide libraries[J].J Viro Metho,2009,156(1-2);169-173.
  • 7Saul F A,Alzari P M.Crystallographic studies of antigen-antibody interations[J].Meth Mol Biol,1996,66:11.
  • 8Hoop J P,Wood K R.Prediction of protein antigenic determinants from amino acid sequences[J].Immunology,1981,78(6):3824-3828.
  • 9Saha S,Raghava G P S.Prediction of continuous B-cell epitopes in an antigen using recurrent neural network[J].Proteins,2006,65(1):40-48.
  • 10Castrignan T,Demeo P D O,Carrabino D,et al.The MEPS server for identifying protein conformational epitopes[J].BMC Bioinformatics,2007,8(1):6-10.

共引文献57

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部