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A Sequencing-Based Linkage Map of Cucumber 被引量：5

A Sequencing-Based Linkage Map of Cucumber
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摘要 Cucumber （Cucumis sativus L., 2n = 2x = 14） is an economically important vegetable worldwide and has served as a model sys- tem for plant vascular biology and sex determination studies. We reported the draft genome assembly of the North China type cucumber line 9930 in 2009 （Huang et al., 2009a） and constructed a single-base resolution map of cucumber genomic variation by resequencing of the genomes of 115 core germplasm lines （Qi et al., 2013）, which enabled genome-wide association studies of important traits in cucumber （Shang et al., 2014）. Cucumber （Cucumis sativus L., 2n = 2x = 14） is an economically important vegetable worldwide and has served as a model sys- tem for plant vascular biology and sex determination studies. We reported the draft genome assembly of the North China type cucumber line 9930 in 2009 （Huang et al., 2009a） and constructed a single-base resolution map of cucumber genomic variation by resequencing of the genomes of 115 core germplasm lines （Qi et al., 2013）, which enabled genome-wide association studies of important traits in cucumber （Shang et al., 2014）.
作者 Zhou, Qian Miao, Han Li, Shuai Zhang, Shengping Wang, Ye Weng, Yiqun Zhang, Zhonghua Huang, Sanwen Gu, Xingfang
机构地区 Chinese Acad Agr Sci Chinese Acad Agr Sci Univ Wisconsin
出处 《Molecular Plant》 SCIE CAS CSCD 2015年第6期961-963,共3页 分子植物（英文版）
分类号 S642.2 [农业科学—蔬菜学] S828.2 [农业科学—畜牧学]
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参考文献10

  • 1Huang, S., Li, R., Zhang, Z., Li, L., Gu, X., Fan, W., Lucas, W.J., Wang X., Xie, B., Ni, P., et al. (2009a). The genome of the cucumber Cucumis sativus L. Nat. Genet. 41:1275-1281.
  • 2Huang, X., Feng, Q., Qian, Q., Zhao, Q., Wang, L., Wang, A., Guan, J., Fan, D., Weng, Q., Huang, T., et al. (2009b). High-throughput genotyping by whole-genome resequencing. Genome Res. 19:1068- 1076.
  • 3Kang, H., Weng, Y., Yang, Y., Zhang, Z., Zhang, S., Mao, Z., Cheng, G., Gu, X., Huang, S., and Xie, B. (2011). Fine genetic mapping localizes cucumber scab resistance gene Ccu into an R gene cluster. Theor. Appl. Genet. 122:795-803.
  • 4Miao, H., Zhang, S., Wang, X., Zhang, Z., Li, M., Mu, S., Cheng, Z., Zhang, R., Huang, S., Xie, B., et al. (2011). A linkage map of cultivated cucumber (Cucumis sativus L.) with 248 microsatellite marker loci and seven genes for horticulturally important traits. Euphytica 182:167-176.
  • 5Qi, J., Liu, X., Shen, D., Miao, H., Xie, B., Li, X., Zeng, P., Wang, S., Shang, Y., Gu, X., et al. (2013). A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity. Nat. Genet. 45:1510-1515.
  • 6Ren, Y., Zhang, Z., Liu, J., Staub, J.E., Han, Y., Cheng, Z., Li, X., Lu, J., Miao, H., Kang, H., et al. (2009). An integrated genetic and cytogenetic map of the cucumber genome, PLoS One 4:e5795.
  • 7Shang, Y., Ma, Y., Zhou, Y., Zhang, H., Duan, L., Chen, H., Zeng, J., Zhou, Q., Wang, S., Gu, W., et al. (2014). Biosynthesis, regulation, and domestication of bitterness in cucumber. Science 346:1084-1088.
  • 8Sun, J., Zhang, Z., Zong, X., Huang, S., Li, Z., and Han, Y. (2013). A high- resolution cucumber cytogenetic map integrated with the genome assembly. BMC Genomics 14:461.
  • 9Yang, X., Li, Y., Zhang, W., He, H., Pan, J., and Cai, R. (2013). Fine mapping of the uniform immature fruit color gene u in cucumber (Cucumis sativus L.). Euphytica 196:341-348.
  • 10Yang, X., Zhang, W., He, H., Nie, J., Bie, B., Zhao, J., Ren, G., Li, Y., Zhang, D., Pan, J., et al. (2014). Tuberculate fruit gene Tu encodes a C2 H2 zinc finger protein that is required for the warty fruit phenotype in cucumber (Cucumis sativus L.), Plant J. 78:1034-1046.

同被引文献30

引证文献5

二级引证文献9

Molecular Plant
2015年 第6期

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