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鸟嘌呤与nH_2O(n=1、2)的水化去氨基反应机理的理论研究 被引量:1

Theoretical Study on the Hydrolytic Deamination Reaction Mechanism of Guanine and n H_2O( n = 1、2)
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摘要 在B3LYP/6-31G**的计算水平上,研究了鸟嘌呤在一分子和两分子水参与下水化去氨基反应的机理.结果表明:鸟嘌呤不管是与一分子水还是两分子水的水化去氨基反应,都是分两步进行的.首先,发生水解反应生成四配位的中间体,这一步为速控步;接着,发生分子内的氢迁移并脱去氨基生成终产物黄嘌呤.鸟嘌呤在两分子水的作用下发生的去氨基反应,其中一分子水起催化剂的作用.溶剂化效应(B3LYP/6-31G**)计算结果说明,溶剂化效应并不改变反应的进程,只降低反应过程的活化位垒.鸟嘌呤在一分子或两分子水参与下,其水化去氨基反应的速控步活化位垒比较高,在动力学上难以进行. The hydrolytic deamination reaction mechanism of guanine( G) and nH_2O( n = 1、2) have been theoretically investigated including solvent effects at the B3 LYP /6-31G**levels. The results showed that the hydrolytic deamination reaction of G may proceed two steps. The first step was rate-controlling,and the second step belonged to an internal hydrogen transfer reaction. The study of the potential energy surface showed that the deamination reaction of G-n H_2O did not took place because of a higher barrier for the rate-controlling,which was agreement with the experimental result. In addition,one water molecule acted as catalyst for the deaminaiton reaction of G and 2H_2O.
出处 《信阳师范学院学报(自然科学版)》 CAS 北大核心 2016年第2期189-192,共4页 Journal of Xinyang Normal University(Natural Science Edition)
基金 上海市科学技术委员会项目(14500503300)
关键词 鸟嘌呤 水化去氨基反应 B3LYP PCM Guanine Hydrolytic deamination reaction B3LYP PCM
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  • 1NEIDL S.Oxford hand book of nucleic acid structure[M].New York:Oxford university press Inc,1999.
  • 2KUCHINO Y,MORI F,KASAI H,et al.Misreading of DNA templates containing 8-hydroxydeoxyguanosine at the modified base and at adjacent residues[J].Nature,1987,327(6117):77-79.
  • 3YAO L S,CUKIER R I,YAN H G.Catalytic mechanism of guanine deaminase:an ONIOM and molecular dynamics study[J].Journal of Physical Chemistry B,2007,111(16):4200-4210.
  • 4ZHANG A H,YANG B H,LI Z H.Theoretical study on the hydrolytic deamination reaction mechanism of adenine-(H2O)n(n=4)[J].Journal of Molecular Structure:THEOCHEM,2007,819(1/2/3):95-101.
  • 5张爱华,杨宝华,李琳.5-甲基胞嘧啶水解反应机理的理论研究[J].信阳师范学院学报(自然科学版),2014,27(3):341-343. 被引量:6
  • 6SPONER J E,SANZ-MIGUEL P J,SANTIAGO L R,et al.Metal-mediated deamination of cytosine:Experiment and DFT calculations[J].Angewandte Chemie International Edition,2004,43(40):5396-5399.
  • 7李澜,瞿志豪,王竑,李宗和.甲基重氮烷阳离子(CH3N2^+)与DNA碱基的甲基化反应[J].中国科学(B辑),2008,38(12):1075-1080. 被引量:1
  • 8李澜,王竑,牛晓娟,李宗和.α-羟基化吡咯烷亚硝胺代谢及形成DNA加合物反应机理的理论研究[J].高等学校化学学报,2009,30(8):1596-1599. 被引量:3
  • 9GOGGIN M,ANDERSON C,PARK S,et al.Quantitative high-performance liquid chromatography-electrospray ionization-tandem mass spectrometry analysis of the adenine-guanine cross-links of 1,2,3,4-diepoxybutane in tissues of butadiene-exposed B6C3F1 mice[J].Chemical Research in Toxicology,2008,21(5):1163-1170.
  • 10LEE C,YANG W T,PARR R G.Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density[J].Physical Review.B,Condensed Matter,1988,37(2):785-789.

二级参考文献68

  • 1Lee V M, Keefer L K, Archer M C. An evaluation of the roles of metabolic denitrosation and α-hydroxylation in the heptatoxicity of N-nitrosodimethylamine. Chem Res Toxicol, 1996, 9(8): 1319-1324.
  • 2Wang M Y, Pramod U, Trieu T D, Leo E B, Stephen S H. Lactols in hydrolysates of DNA treated with α-acetoxy-N-nitrosopyrrolidine or crotonaldehyde. Chem Res Toxicol, 1998, 11, 1567-1573.
  • 3Miller J A, Miller E C. Ultimate Chemical Carcinogens as Reactive Mutagenic Electrophiles. In origins of Human Cancer, Book B, Gold Spring Harbor, New York: Cold Spring Harbor Press, 1977. 605-627.
  • 4Singer B, Grunberger D. Molecular Biology of Mutagens and Carcinogens. New York: Plenum Pres, 1983. 161-183.
  • 5Loeppky R N, Michejda C J. Nitrosamines and Related N-Nitroso Compounds Chemistry and Biochemistry, ACS Symposium Series, Vol. 553. Washington DC, 1994. 279-289.
  • 6Glaser R, Choy G S. Importance of the anisotropy of atoms in molecules for the representation of electron density distributions with Lewis structures. A case study of aliphatic diazonium ions. J Am Chem Soc, 1993, 115(6): 2340-2347.
  • 7Vincent M A, Radom L. An ab initio study of the methane- and benzene-Diazonium ions. J Am Chem Soc, 1978, 100, 3306-3311.
  • 8Reynolds C, Thomson C A. A theoretical study of N-nitrosamine metabolites: Possible alkylating species in carcinogenesis by N,N'-dimethyl nitrosamine. Int J Quant Chem, 1986, 30, 751-762.
  • 9Mohammad S N, Hopfinger A J. Chemical reactivity of a methyldiazonium ion with nucleophilic centers of DNA bases. J theor Biol, 1980, 87(2): 401-419.
  • 10Kism N S, Lebreton P R. UV photoelectron and ab ini6o quantum mechanical evaluation of nucleotide ionization potentials in water-counterion environments: π polarization effects on DNA alkylation by carcinogenic methylating agents. J Am Chem Soc, 1996, 118(15): 3694-3707.

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