摘要
目的探讨AIRE基因单核苷酸多态性(single nucleotide polymorphisms,SNP)与陕西汉族类风湿关节炎(rheumatoid arthritis,RA)的相关性。方法收集陕西汉中地区人群样本共960例,其中确诊RA患者384例,正常对照576名,采用病例-对照研究方法,选取AIRE基因rs2075876、rs760426、rs1800520、rs878081等四个SNP位点,采用单碱基延伸检测SNP位点,分析其与RA的相关性。结果所选A/RE基因4个SNP位点均符合Hardy-Weinberg平衡检验(P〉0.05)。研究发现A/RE基因内含子区域rs2075876G等位基因(OR=1.41,95%CI 1.17~1.71,P=3.7×10^-4),显性模式(OR=1.79,95%CI 1.21~2.63,P:0.002)和隐性模式(OR=1.48,95%CI 1.14~1.93,P=0.003)在RA组与对照组比较差异有统计学意义。rs760426A等位基因(OR=1.26,95%CI 1.04~1.52,P=0.01),隐性模式(OR=1.33,95%CI 1.02~1.73,P=0.03)在RA组与对照组比较差异有统计学意义。而rs878081和rs1800520等位基因频率在RA组与对照组之间差异无统计学意义(P〉0.05)。AIRE基因4个SNP单倍型分析发现,rs2075876、rs760426、rs1800520位于同一连锁不平衡区域,其单倍型CAG在RA组与对照组之间差异有统计学意义(P=0.01)。结论AIRE基因内含子区域rs2075876和rs760426单核苷酸多态性位点,可能是陕西汉族人RA的易感基因位点。
Objective To assess the association of AIRE gene polymorphisms with rheumatoid arthritis (RA) among ethnic Han Chinese from Shaan'xi Province. Methods Genomic DNA was prepared from 384 individuals with RA and 576 healthy controls. Four tag single nucleotide polymorphisms (SNP) in the AIRE gene (rs2075876, rs760426, rs1800520, and rs878081) were genotyped with a SNaPshot method. The genotypic and allelic frequencies were evaluated using a Chi square test. Genotyping data was corrected by Logistic regression for age and gender. The linkage disequilibrium (LD) block structure was examined using Hapview 4.2 software. Results All 4 SNPs have conformed to Hardy-Weinberg equilibrium (P〉0.05). Two SNPs were significantly associated with RA, which included G allele of rs2075876 (OR= 1.41, 95%CI: 1. 17-1. 71, P = 3. 7 × 10^-4 ) i Dominant model (OR = 1. 79, 95% CI: 1. 21-2. 63, P=0. 002), Recessive model (OR=1. 48, 95%CI: 1.14-1.93, P=0. 003). rs760426 A risk allele (OR=1. 26, 95%CI: 1.04-1.52, P=0.01); Recessive model (OR=1. 33, 95%CI: 1.02-1.73, P=0. 03). In addition, rs878081 and rs1800520 SNPs were not allele and genotyped polymorphisms were significantly associated with RA susceptibility. Conclusion The rs2075876 and rs760426 loci of the AIRE gene are associated with increased risk for rheumatoid arthritis among ethnic Han Chinese from ShaanXi.
出处
《中华医学遗传学杂志》
CAS
CSCD
北大核心
2016年第3期373-377,共5页
Chinese Journal of Medical Genetics