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Comparison the effects of bioaugmentation versus biostimulation on marine microbial community by PCR–DGGE: A mesocosm scale 被引量:1

Comparison the effects of bioaugmentation versus biostimulation on marine microbial community by PCR–DGGE: A mesocosm scale
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摘要 In order to better understand the effects of biostimulation and bioaugmentation processes on a marine microbial community, three different mesocosm experiments were planned. Natural seawater(10.000 L) was artificially polluted with crude oil(1 L) and(1) inorganic nutrients(Biostimulating Mesocosm, BM),(2) inorganic nutrients and an inoculum of Alcanivorax borkumensis SK2(Single Bioaugmentation Mesocosm, SBM),(3) inorganic nutrients and inoculums of A. borkumensis SK2 and Thalassolituus oleivorans MIL-1(Consortium Bioaugmentation Mesocosm, CBM). During the experimental period(20 days), samples were taken from each mesocosm and the community structure was analyzed by PCR–DGGE. The 16 S r RNA gene DGGE banding patterns and sequence analysis demonstrated that biostimulation had the lowest effect on microbial biodiversity in the mesocosms; however, the biodiversity of the marine microbial community dramatically decreased in the CBM(Shannon index was 0.6 in T3). The community structures among the three mesocosms were also markedly different,and major bacteria derived from DGGE bands were related to uncultured Gamma Proteobacteria. The biodegradation results show that the Single Bioaugmentation Mesocosm(SBM) system had the highest percentage of degradation(95%) in comparison to the BM mesocosm(80%) and CBM(70%). In order to better understand the effects of biostimulation and bioaugmentation processes on a marine microbial community, three different mesocosm experiments were planned. Natural seawater(10.000 L) was artificially polluted with crude oil(1 L) and(1) inorganic nutrients(Biostimulating Mesocosm, BM),(2) inorganic nutrients and an inoculum of Alcanivorax borkumensis SK2(Single Bioaugmentation Mesocosm, SBM),(3) inorganic nutrients and inoculums of A. borkumensis SK2 and Thalassolituus oleivorans MIL-1(Consortium Bioaugmentation Mesocosm, CBM). During the experimental period(20 days), samples were taken from each mesocosm and the community structure was analyzed by PCR–DGGE. The 16 S r RNA gene DGGE banding patterns and sequence analysis demonstrated that biostimulation had the lowest effect on microbial biodiversity in the mesocosms; however, the biodiversity of the marine microbial community dramatically decreased in the CBM(Shannon index was 0.6 in T3). The community structures among the three mesocosms were also markedly different,and major bacteria derived from DGGE bands were related to uncultured Gamma Proteobacteria. The biodegradation results show that the Single Bioaugmentation Mesocosm(SBM) system had the highest percentage of degradation(95%) in comparison to the BM mesocosm(80%) and CBM(70%).
出处 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2016年第5期136-146,共11页 环境科学学报(英文版)
基金 supported by the Shahid Bahonar University of Kerman and grants from EC Project “Unraveling and exploiting Mediterranean Sea microbial diversity and ecology for Xenobiotics' and pollutants' clean up” (No. ULIXES-FP7KBBE-2010-3.5-03)
关键词 Alcanivorax Crude oil DGGE Marine environment Mesocosm Alcanivorax Crude oil DGGE Marine environment Mesocosm
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  • 1Amann, R.I., Ludwig, W., Schleifer, K.H., 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59, 143-169.
  • 2Bayat, Z., Hassanshahian, M., Askeri Hesni, M., 2015. Enrichment and isolation of crude oil degrading bacteria from some mussels collected from the Persian Gulf. Mar. Pollut. Bull. 101 (1), 85-91.
  • 3Boon, N., Windt, W.W., Verstraete, W., Top, E.M., 2002. Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 15S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants. FEMS Microbiol. Ecol. 39, 101-112.
  • 4Cappello, S., Denaro, R., Genovese, M., Giuliano, L., Yakimov, M.M., 2006. Predominant growth of Alcaniuorax during experiments on oil spill bioremediation in mesocosms. Microbiol. Res. 162 (2), 185-190.
  • 5Cappello, S., Genovese, M., Della, T., Crisari, A., Hassanshahian, M., Santisi, S., Calogero, R., et al., 2012. Effect of bioemulsiflcant exopolysaccharide EPS2003 on microbial community dynamics during assays of oil spill bioremediation: a microcosm study. Mar. Pollut. Bull. 64, 2820-2828.
  • 6Castle, D.M., Montgomery, M.T., Kirchman, D.L., 2006. Effects of naphthalene on microbial community composition in the Delaware estuary. FEMS Microbiol. Ecol. 56, 55-63.
  • 7Denaro, R., D'Auria, G., Di Marco, G., Genovese, M., Troussellier, M., Yakimov, M.M., et al., 2005. Assessing terminal restriction fragment length polymorphism suitability for the description of bacterial community structure and dynamics in hydrocarbon-polluted marine environments. Environ. Microbiol. 7, 78-87.
  • 8Dutta, T.K., Harayama, S., 2001. Analysis of long-side chain alkylaromatics in crude oil for evaluation of their fate in the environment. Environ. Sci. Technoh 35, 102-107.
  • 9Dyksterhouse, S.E., Gray, J.P., Herwig, R.P., Lara, J.C., Staley, J.T., 1995. Cycloclasticus pugetii gen. nov., sp. nov., an aromatic hydrocarbon-degrading bacterium from marine sediments. Int. J. Syst. Bacteriol. 45, 116-123.
  • 10Eichner, CIA., Erb, R.W., Timmis, K.N., 1999. Thermal gradient gel electrophoresis analysis of bioprotection from pollutant shocks in the activated sludge microbial community. J. Appl. Environ. Microbiol. 65, 102-109.

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