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一种快速有效检测SSR标记的非变性聚丙烯酰胺凝胶的银染方法 被引量:15

A rapid and effective method of silver staining for detecting SSR markers in nondenaturing polyacrylamide gels
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摘要 聚丙烯酰胺凝胶银染法是一种具有高分辨率检测SSR标记的有效方法,然而传统的银染方法存在操作步骤较多、所需时间较长及试剂种类与用量较多等不足.本研究利用菜心和烟草SSR标记为研究对象,建立一种能快速有效检测其PCR扩增产物的非变性聚丙烯酰胺凝胶的银染方法.该方法包括染色和显影2个主要操作步骤,整个银染流程耗时6~7min,只需要AgNO3、NaOH和甲醛3种试剂,所检测SSR标记的DNA条带清晰、易辨.与其他银染法相比,本研究建立的银染法具有易于操作、耗时少、所需试剂种类和用量少及检测效果好的优势. Silver staining is an effective method to detect SSRs with high resolution in polyacrylamide gel. However the conventional methods of silver staining are time-consuming because they have a number of time-dependent procedures with more kinds of reagents. Here we reported a rapid and effective silver staining method for detecting PCR amplification products in nondenaturing polyacrylamide gel by using SSRs of flowering Chinese cabbage and tobacco. This method includs two major steps-- staining and development, within 6 to 7 rains, and requirs only three reagents which are HNO3 , NaOH and HCOH. With the method, DNA fragments of SSRs are unambiguously detected with high resolution. Compared with other silver staining methods, this new method has advantages of easy operation, time-saving, less amount of chemical reagents and good detection effect.
出处 《广州大学学报(自然科学版)》 CAS 2016年第4期8-12,49,共6页 Journal of Guangzhou University:Natural Science Edition
基金 国家自然科学基金资助项目(30871526) 广东省自然科学基金资助项目(2015A030310136 2015A030313500) 广东省科技计划资助项目(2016B020201001) 广东省烟草专卖局科技计划资助项目(201201 201403) 广东省普通高校国际暨港澳台合作创新平台及国际合作重大资助项目(2015KGJHZ015) 广州市科技计划资助项目(2014J4100123) 广州市属高校科技计划资助项目(1201420621)
关键词 SSR标记 检测 非变性聚丙烯酰胺凝胶 银染 SSR marker detection nondenaturing polyacrylamide gel silver staining
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  • 1POWELL W, MACHRAY G C, PROVAN J. Polymorphism revealed by simple sequence repeats [ J ]. Trends Plant Sci, 1996, 1(7) : 215-222.
  • 2VARSHNEY R K, GRANER A, SORRELLS M E. Genic microsatellite markers in plants: Features and applications [ J ]. Trends Bio, 2005, 23(1): 48-55.
  • 3TULER A C, CARRIJO T T, NOIA L R, et al. SSR markers: A tool for species identification in Psidium (Myrtaceae) [J]. Mol Bio Rep, 2015, 42(11) : 1501-1513.
  • 4SAMBROOK J, FRITSCH E F, MANIATIS T. Molecular Cloning: A laboratory manual [ J ]. Cold Spring Harbor Labor Press, 1989 : 304-306.
  • 5BASSAM B J, CAETANO A G, GRESSHOFF P M. Fast and sensitive silver staining of DNA in polyacrylamide gels [ J ]. Anal Biochem, 1991, 196(1):80-83.
  • 6HAN Y, TENG C, HU Z, et al. An optimal method of DNA silver staining in polyacrylamide gels [ J ]. Electrophoresis, 2008, 29: 1355-1358.
  • 7BENBOUZA H, JACQUEMIN J M, BAUDOIN J P, et al. Optimization of a reliable, fast, cheap and sensitive silver stai- ning method to detect SSR markers in polyacrylamide gels[ J]. Bio Agron Soc Environ, 2006, 10: 77-81.
  • 8SANGUINETI'I C J, DIAS N E, SIMPSON A J G. Rapid silver staining PCR products separated polyaerylamidegels [ J ]. Biotechniques, 1994, 17: 915-919.
  • 9CRESTE S, NETO A T, FIGUEIRA A. Detection of single sequence repeat polymorphisms in denaturing polyacrylamide se- quencing gels by silver staining[J1. Plant Mol Biol Rep, 2001, 19: 299-306.
  • 10QU L, LI X, WU G, et al. Efficient and sensitive method of DNA silver staining in polyaerylamide gels[ J]. Electrophore- sis, 2005, 26: 99-101.

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