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Isolation and Characterization of Nine Microsatellite Markers for Red-backed Ratsnake,Elaphe rufodorsata

Isolation and Characterization of Nine Microsatellite Markers for Red-backed Ratsnake,Elaphe rufodorsata
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摘要 The red-backed ratsnake(Elaphe rufodorsata) is widely distributed in East Asia, especially China. This species is a common snake in plain river network region. In the past several decades, E. rufodorsata has dramatically declined due to the effect of human activities and over hunting for traditional Chinese medicine. We developed nine species-specific microsatellite loci in 190 individuals collected from Huzhou, Zhejiang province in China. These markers revealed a high degree of genetic diversity(13–41 alleles per locus) and heterozygosity(H O ranged from 0.266 to 0.941, and H E ranged from 0.851 to 0.937). No locus exhibited significant deviations from Hardy–Weinberg equilibrium. There was no evidence of linkage disequilibrium among pairs of loci. These microsatellite markers were described in our study will be valuable tools for the long term management and population-level studies(e.g. the population structure, genetic diversity and variation, individual paternity and evolutionary history) of the species. The red-backed ratsnake(Elaphe rufodorsata) is widely distributed in East Asia, especially China. This species is a common snake in plain river network region. In the past several decades, E. rufodorsata has dramatically declined due to the effect of human activities and over hunting for traditional Chinese medicine. We developed nine species-specific microsatellite loci in 190 individuals collected from Huzhou, Zhejiang province in China. These markers revealed a high degree of genetic diversity(13–41 alleles per locus) and heterozygosity(H O ranged from 0.266 to 0.941, and H E ranged from 0.851 to 0.937). No locus exhibited significant deviations from Hardy–Weinberg equilibrium. There was no evidence of linkage disequilibrium among pairs of loci. These microsatellite markers were described in our study will be valuable tools for the long term management and population-level studies(e.g. the population structure, genetic diversity and variation, individual paternity and evolutionary history) of the species.
出处 《Asian Herpetological Research》 SCIE CSCD 2016年第3期227-228,共2页 亚洲两栖爬行动物研究(英文版)
基金 supported by grants from Natural Science Foundation of China (31200283,31272294 and 31270571) the Priority Academic Program Development of Jiangsu Higher Education Institutions,Teaching Reform Research of Nanjing Normal University (2014-61) Postgraduate Research Innovation Projects (KYLX_0716) of Nanjing Normal University
关键词 microsatellite alleles backed heterozygosity linkage locus ranged snake declined evolutionary microsatellite alleles backed heterozygosity linkage locus ranged snake declined evolutionary
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参考文献5

  • 1Hua L., Mao L. X., Chert C., Gao J. F., Lin L. H. 2012. Isolation and characterization of microsatellite loci in the Reevese's butterfly lizard Leiolepis reevesii (Agamidae). Conserv Genet Resour, 4:791-794.
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