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DNA序列分析鉴定新的HLA等位基因A*29:49

Identification of a novel HLA allele A * 29.. 49 using sequence based typing
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摘要 目的应用测序分型技术(sequence based typing,SBT)方法鉴定一个中国汉族人群中发现的新HLA-A等位基因。方法应用双链直接测序分型技术进行中华骨髓库志愿捐献者常规HLA分型,发现1例在HLA-A位点无完全匹配结果,采用等位基因特异性扩增测序分型方法进行新等位基因序列鉴定。结果发现一个等位基因为新HLA-A基因序列,与同源性最高的等位基因:HLA-A*29:01:01:01相比,在碱基368位A→T改变,密码子99位TAT→TTT,编码氨基酸Y→F,另一等位基因确认为A*02:06:01。结论鉴定了一个新HLA-A等位基因,被世界卫生组织HLA因子命名委员会正式命名为HLA→A*29:49。 Objective To report on a novel HLA-A allele, A* 29:49, identified in a Chinese H an population by sequence based typing (SET). Methods A donor from China Marrow Donor Programme (CMDP) was typed with a bi-allelic PCR-SBT kit, and no full matched result was obtained for the HLA-A locus. The novel HLA allele was verified with an allele-specific amplification SBT kit. Results A novel HLA-A allele was identified, which has differed by one nucleotide from the closest matched allele, HLA-A * 29 : 01 : 01 : 01, at position 368 (A→T), codon 99 (TAT→TTT), resulting in an amino acid substitution (Y→F). Another allele was verified as A * 02:06:01. Conclusion A novel HLA-A allele was identified and officially named as HLA-A * 29:49 by the WHO Nomenclature Committee for Factors of the HLA System.
出处 《中华医学遗传学杂志》 CAS CSCD 北大核心 2016年第6期841-843,共3页 Chinese Journal of Medical Genetics
基金 山东省自然科学基金资助项目(ZR2012CM031)
关键词 人类白细胞抗原 新等位基因 A*29 49等位基因 基于序列的分型技术 Human leukocyte antigen Novel allele A * 29:49 allele Sequence based typing
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