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Evaluation of bacterial pathogen diversity,abundance and health risks in urban recreational water by amplicon next-generation sequencing and quantitative PCR 被引量:5

Evaluation of bacterial pathogen diversity,abundance and health risks in urban recreational water by amplicon next-generation sequencing and quantitative PCR
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摘要 The microbial quality of urban recreational water is of great concern to public health.The monitoring of indicator organisms and several pathogens alone is not sufficient to accurately and comprehensively identify microbial risks.To assess the levels of bacterial pathogens and health risks in urban recreational water,we analyzed pathogen diversity and quantified four pathogens in 46 water samples collected from waterbodies in Beijing Olympic Forest Park in one year.The pathogen diversity revealed by 16 S r RNA gene targeted next-generation sequencing(NGS) showed that 16 of 40 genera and 13 of 76 reference species were present.The most abundant species were Acinetobacter johnsonii,Mycobacterium avium and Aeromonas spp.Quantitative polymerase chain reaction(q PCR) of Escherichia coli(uid A),Aeromonas(aer A),M.avium(16S r RNA),Pseudomonas aeruginosa(oaa) and Salmonella(inv A) showed that the aer A genes were the most abundant,occurring in all samples with concentrations of 10^(4–6) genome copies/100 m L,followed by oaa,inv A and M.avium.In total,34.8% of the samples harbored all genes,indicating the prevalence of these pathogens in this recreational waterbody.Based on the q PCR results,a quantitative microbial risk assessment(QMRA) showed that the annual infection risks of Salmonella,M.avium and P.aeruginosa in five activities were mostly greater than the U.S.EPA risk limit for recreational contacts,and children playing with water may be exposed to the greatest infection risk.Our findings provide a comprehensive understanding of bacterial pathogen diversity and pathogen abundance in urban recreational water by applying both NGS and q PCR. The microbial quality of urban recreational water is of great concern to public health.The monitoring of indicator organisms and several pathogens alone is not sufficient to accurately and comprehensively identify microbial risks.To assess the levels of bacterial pathogens and health risks in urban recreational water,we analyzed pathogen diversity and quantified four pathogens in 46 water samples collected from waterbodies in Beijing Olympic Forest Park in one year.The pathogen diversity revealed by 16 S r RNA gene targeted next-generation sequencing(NGS) showed that 16 of 40 genera and 13 of 76 reference species were present.The most abundant species were Acinetobacter johnsonii,Mycobacterium avium and Aeromonas spp.Quantitative polymerase chain reaction(q PCR) of Escherichia coli(uid A),Aeromonas(aer A),M.avium(16S r RNA),Pseudomonas aeruginosa(oaa) and Salmonella(inv A) showed that the aer A genes were the most abundant,occurring in all samples with concentrations of 10^(4–6) genome copies/100 m L,followed by oaa,inv A and M.avium.In total,34.8% of the samples harbored all genes,indicating the prevalence of these pathogens in this recreational waterbody.Based on the q PCR results,a quantitative microbial risk assessment(QMRA) showed that the annual infection risks of Salmonella,M.avium and P.aeruginosa in five activities were mostly greater than the U.S.EPA risk limit for recreational contacts,and children playing with water may be exposed to the greatest infection risk.Our findings provide a comprehensive understanding of bacterial pathogen diversity and pathogen abundance in urban recreational water by applying both NGS and q PCR.
出处 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2017年第7期137-149,共13页 环境科学学报(英文版)
基金 supported by the Key Program of the National Natural Science Foundation of China(No.51138006) the National Key Research on Water Environment Pollution Control in China(No.2012ZX07301-001)
关键词 Human pathogens Urban water Recreational activities 16S rRNA gene targeted NGS qPCR Quantitative microbial risk assessment Human pathogens Urban water Recreational activities 16S rRNA gene targeted NGS qPCR Quantitative microbial risk assessment
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  • 1杨伟利.碧波绕莞邑 治水为民生——东莞市创建国家环境保护模范城市实录二[J].环境,2007(10):54-57. 被引量:1
  • 2An W, Zhang D Q, Xiao S M, Yu J W, Yang M, 2011. Quantitative health risk assessment of Cryptosporidium in rivers of southern China based on continuous monitoring. Environ- mental Science and Technology, 45 (11): 4951-4958.
  • 3An W, Zhang D Q, Xiao S M, Yu J W, Yang M, 2012. Risk assessment of Giardia in rivers of southern China based on continuous monitoring. Journal of Environmental Sciences, 24(2): 309-313.
  • 4Anderson M A, Stewart M H, Yates M V, Gerba C P, 1998. Mod- eling the impact of body-contact recreation on pathogen concentrations in a source drinking water reservoir. Water Research, 32(11): 3293-3306.
  • 5Ashbolt N J, 2004. Microbial contamination of drinking water and disease outcomes in developing regions. Toxicology, 198(1-3): 229-238.
  • 6Barrell R A, Hunter P R, Nichols G, 2000. Microbiological standards for water and their relationship to health risk. Communicable Disease and Public Health, 3(1): 8-13.
  • 7Brookes J D, Antenucci J, Hipsey M, Burch M D, Ashbolt N J, Ferguson C, 2004. Fate and transport of pathogens in lakes and reservoirs. Environment International, 30(5): 741-759.
  • 8Carey C M, Lee H, Trevors J T, 2006. Comparison of most prob- able number-PCR and most probable number-foci detection method for quantifying infectious Cryptosporidium parvum oocysts in environmental samples. Journal of Microbiolog- ical Methods, 67(2): 363-372.
  • 9Carmena D, Aguinagalde X, Zigorraga C, Femandez-Crespo J C, Ocio J A, 2007. Presence of Giardia cysts and Cryp- tosporidium oocysts in drinking water supplies in northern Spain. Journal of Applied Microbiology, 102(3): 619-629.
  • 10Cebula T A, Payne W L, Feng P, 1995. Simultaneous identi- fication of strains of Escherichia coli serotype O157:H7 and their Shiga-like toxin type by mismatch amplification mutation assay-multiplex PCR. Journal of Clinical Micro- biology, 33(1): 248-250.

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