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Exploring differentially expressed genes associated with fertility instability of S-type cytoplasmic male-sterility in maize by RNA-seq 被引量:5

Exploring differentially expressed genes associated with fertility instability of S-type cytoplasmic male-sterility in maize by RNA-seq
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摘要 The germplasm resources for the S-type male sterility is rich in maize and it is resistant to Bipolaris maydis race T and CI, but the commercial application of S-type cytoplasmic male sterility (CMS-S) in maize hybrid industry is greatly compromised because of its common fertility instability. Currently, the existence of multiple minor effect loci in specific nuclear genetic backgrounds was considered as the molecular mechanism for this phenomenon. In the present study, we evaluated the fertility segregation of the different populations with the fertility instable material FIL-H in two environments of Beijing and Hainan, China. Our results indicated that the fertility instability of FIL-H was regulated by multiple genes, and the expression of these genes was sensitive to environmental factors. Using RNA sequencing (RNA-seq) technology, transcriptomes of the sterile plants and partially fertile plants resulted from the backcross of FIL-HxJing 724 in Hainan were analyzed and 2 108 genes with different expression were identified, including 1 951 up-regulated and 157 down-regulated genes. The cluster analysis indicated that these differentially expressed genes (DEGs) might play roles in many biological processes, such as the energy production and conversion, carbohydrate metabolism and signal transduction. In addition, the path- way of the starch and sucrose metabolism was emphatically investigated to reveal the DEGs during the process of starch biosynthesis between sterile and partially fertile plants, which were related to the key catalytic enzymes, such as ADP-G pyrophosphorylase, starch synthase and starch branching enzyme. The up-regulation of these genes in the partially fertile plant may promote the starch accumulation in its pollen. Our data provide the important theoretical basis for the further exploration of the molecular mechanism for the fertility instability in CMS-S maize. The germplasm resources for the S-type male sterility is rich in maize and it is resistant to Bipolaris maydis race T and CI, but the commercial application of S-type cytoplasmic male sterility (CMS-S) in maize hybrid industry is greatly compromised because of its common fertility instability. Currently, the existence of multiple minor effect loci in specific nuclear genetic backgrounds was considered as the molecular mechanism for this phenomenon. In the present study, we evaluated the fertility segregation of the different populations with the fertility instable material FIL-H in two environments of Beijing and Hainan, China. Our results indicated that the fertility instability of FIL-H was regulated by multiple genes, and the expression of these genes was sensitive to environmental factors. Using RNA sequencing (RNA-seq) technology, transcriptomes of the sterile plants and partially fertile plants resulted from the backcross of FIL-HxJing 724 in Hainan were analyzed and 2 108 genes with different expression were identified, including 1 951 up-regulated and 157 down-regulated genes. The cluster analysis indicated that these differentially expressed genes (DEGs) might play roles in many biological processes, such as the energy production and conversion, carbohydrate metabolism and signal transduction. In addition, the path- way of the starch and sucrose metabolism was emphatically investigated to reveal the DEGs during the process of starch biosynthesis between sterile and partially fertile plants, which were related to the key catalytic enzymes, such as ADP-G pyrophosphorylase, starch synthase and starch branching enzyme. The up-regulation of these genes in the partially fertile plant may promote the starch accumulation in its pollen. Our data provide the important theoretical basis for the further exploration of the molecular mechanism for the fertility instability in CMS-S maize.
机构地区 Maize Research Center
出处 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2017年第8期1689-1699,共11页 农业科学学报(英文版)
基金 supported by the National Key Technologies R&D Program of China during the 12th Five-year Plan period(2014BAD01B09) the Beijing Postdoctoral Research Foundation,China(2014ZZ-68) the Sci-Technology Innovation Project of Beijing Academy of Agriculture and Forestry Science(BAAFS),China(KJCX20140202) the Innovative Team Construction Project of BAAFS,China(JNKYT201603) the Postdoctoral Scientific Fund of BAAFS,China(2014013)
关键词 CMS-S fertility instability RNA-SEQ DEGs CMS-S, fertility instability, RNA-seq, DEGs
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  • 1马春红,郑积德,陈霞,孙世刚,张文英,郑彦平,李广敏.冀玉8号雄性不育化的选育和利用[J].玉米科学,2005,13(2):33-34. 被引量:3
  • 2马春红,李九云,郑积德,翟彩霞,郭秀林,崔四平,陈霞,李广敏.3个自选玉米杂交种雄性不育化育种过程及其利用[J].玉米科学,2005,13(4):30-33. 被引量:7
  • 3崔洋,植物病理学报,1992年,22卷,2期
  • 4崔洋,植物病理学报,1991年,21卷,3期
  • 5Wei Jiankun,Phytopathology,1988年,78卷,5期,550页
  • 6陈伟程,河南农业大学学报,1986年,20卷,1期,52页
  • 7刘克明,华北农学报,1986年,1期,33页
  • 8Wang F, Tian H, Zhao J,et al. Development and characterization ofa core set of SSR markers for fingerprinting analysis of Chinesemaize varieties[J]. Maydica, 2011, 56(1): 1-11.
  • 9Beckett J B. Classification of male-sterile cytoplasms in maize(Zeamays L.)[J]. Crop Sci., 1971,11: 724-726.
  • 10荆绍凌,孙志超,代玉仙,李淑华.玉米雄性不育育种技术[J].中国种业,2009(6):13-15. 被引量:1

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