摘要
目的:探索单核苷酸多态性(SNP)微阵列技术在流产组织遗传学分析中的应用价值。方法:收集2013年10月至2016年6月浙江大学医学院附属妇产科医院不明原因早期自然流产的861例患者的绒毛组织,采用SNP芯片技术对流产绒毛组织的全基因组DNA拷贝数变异进行检测。结果:SNP芯片成功检测所有绒毛组织,成功率为100%。染色体异常检出率为51.10%(440/861),包括染色体非整倍体358份(41.58%),其分布于除1号染色体外所有染色体;三倍体21份(2.44%);单倍体1份(0.12%);单一位点缺失或重复37份(4.30%),其中25例缺失或重复片段小于10 Mb,对其中6例致病性不明确的病例进行夫妇芯片验证,结果显示4份为新发突变,2份遗传自夫妇一方;同时具有两位点缺失或重复23份(2.67%),对其中17份结合夫妇芯片及染色体核型、荧光原位杂交验证,发现新发突变6份,夫妇存在小片段平衡结构异常11份。结论:SNP微阵列芯片可对流产绒毛组织进行相对全面的遗传学分析,发现引起流产的各种遗传因素。
Objective:To assess the clinical application of single nucleotide polymorphism (SNP)-array in detecting abnormal chromosome karyotypes of chorionic villi from early spontaneous abortuses. Methods:A total of 861 chorionic villus samples from unexplained early spontaneous abortion were collected from Women's Hospital, Zhejiang University School of Medicine during October 2013 and June 2016, and SNP-array was performed to detect genome-wide DNA copy number variants. Results:All samples were successfully tested by SNP-array and 440 cases (51.10%) were found to have abnormal chromosome constitutions. Aneuploidy was identified in 358 (41.58%) cases, distributing in all chromosomes except chromosome 1. Triploidy and haploidy were found in 21 (2.44%) and one case (0.12%), respectively. Thirty-seven cases (4.30%) were identified as single chromosomal segment deletion or duplication, 25 of which were less than 10 Mb in size. For 6 of 25 cases with unclear pathogenesis, family studies were carried out to identify origin of deletion or duplication, showing that 4 cases were de novo and 2 were inherited from one of the parents. Twenty-three cases (2.67%) showed two chromosomal deletion/duplication segments. Combining with karyotyping and fluorescence in situ hybridization, 6 cases were identified as de novo aberration and 11 carried small-size segmental balanced abnormality. Conclusion:SNP-array can provide a relatively comprehensive genetic analysis of chorionic villi and can detect various kinds of chromosome abnormalities in spontaneous miscarriages.
出处
《浙江大学学报(医学版)》
CAS
CSCD
北大核心
2017年第3期262-267,共6页
Journal of Zhejiang University(Medical Sciences)
基金
国家自然科学基金(81571500)
浙江省自然科学基金(LZ15H040001
LQ17H040001
LY14H040009)