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Experimental and Theoretical Study of Deprotonation of DNA Adenine Cation Radical

DNA腺嘌呤阳离子自由基脱质子反应机理的研究
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摘要 Among all the DNA components, extremely redox-active guanine (G) and adenine (A) bases are subject to facile loss of an electron and form cation radicals (G+" and A+') when exposed to irradiation or radical oxidants. The subsequent deprotonation of G+' and A+' can invoke DNA damage or interrupt hole transfer in DNA. However, compared with intensive reports for G+, studies on the deprotonation of A+ are still limited at present. Herein, we investigate the deprotonation behavior of A+. by time-resolved laser flash photolysis. The deprotonation product of A(N6-H)' is observed and the deprotonation rate constant, (2.0±0.1)×10 7 s-1, is obtained at room temperature. Further, the deprotonation rate con- stants of A+. are measured at temperatures varying from 280 K to 300 K, from which the activation energy for the N6-H deprotonation is determined to be (17.1±1.0) kJ/mol by Arrhenius equation. In addition, by incorporating the aqueous solvent effect, we perform density functional theory calculations for A+ deprotonation in free base and in duplex DNA. Together with experimental results, the deprotonation mechanisms of A+ in free base and in duplex DNA are revealed, which are of fundamental importance for understanding the oxidative DNA damage and designing DNA-based electrochemical devices.
出处 《Chinese Journal of Chemical Physics》 SCIE CAS CSCD 2017年第6期664-670,I0002,共8页 化学物理学报(英文)
关键词 DNA adenine Deprotonation rate constant Activation energy barrier Densityfunctional theory calculation DNA腺嘌呤 脱质子速率常数 活化能 量子化学计算
分类号 O [理学]
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