摘要
该研究借助RACE技术克隆了铁皮石斛己糖转运蛋白(hexose transporter,HT)基因DoHTl,对其序列特征进行生物信息分析,并采用定量PCR分析基因表达模式。结果表明,DoHTl基因(GenBank注册号KUl60469)eDNA全长1586bp,ORF长l536bp,编码l条由511个氨基酸组成的多肽,56.18kDa,等电点9.08。DoHTl蛋白含有糖转运蛋白协助扩散超家族保守结构域(22~483)、糖转运基序1(139-164)、糖转运基序2(338~355)和功能基序;无信号肽,含11个跨膜域,预测定位在质膜,与多种植物HTs蛋白有较高的一致性(54.7%~80.7%),隶属于MST(单糖转运蛋白)分支,与小兰屿蝴蝶兰亲缘关系最近。DoHTt基因具有组织表达特异性,其转录本在石斛叶中显著最高,茎中次为,分别为根中的19.36,1.82倍。该研究获得DoHTl基因全长及分子特征,为进一步研究其在铁皮石斛糖代谢调控中的作用奠定基础。
In this study, RACE technology was employed to isolate the full length cDNA of DoHT1 in Denclrobium oJficinale, fol- lowed by bioinformatics analysis of the sequence characteristics. And the expression pattern of the gene was also analyzed by quantita- tive PCR. The full length cDNA of DoHT1 was 1 586 bp in length, containing a 1 536 bp ORF, which encoded a 511-aa protein with molecular weight of 56. 18 kD and isoelectric point of 9.08. The deduced DoHT1 protein had the major facilitator superfamily conserved domain (22-483), SUGAR_TRANSPORT_I ( 139-164), and SUGAR TRANSPORT_2 (338-355), typical for sugar transporter; DoHTI, without a single peptide had 11 transmembrane regions, and was predicted to locate in the plasma membrane ; DoHT1 had high identities (54. 7%-80. 7% ) with HTs proteins from various plants. DoHT1 belonged to the MST (monosaccharide transporter) group of the evolutionary tree, and was closely related to the Phalaenopsis equestris. DoHT1 was differentially expressed in the three included organs. The transcripts were significantly the most abundant in the leaves with 19.36 fold than roots, then 1.82 fold in the stems than the roots. The identification and molecular characterization of the full length DoHT1 will be essential for further function study of the gene during the regulation of sugar metabolism of D. offtcinale.
作者
李依民
陈莹
刘阿萍
张娜
黑小斌
张岗
郭顺星
LI Yi-min1, CHEN Ying1 , LIU A-ping1 , ZHANG Na1 , HEI Xiao-bin1 , ZHANG Gang1,2 , GUO Shun-xing2(1. Shaanxi Provincial Key Laboratory for Chinese Medicine Basis & New Drugs Research, College of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang 712046, China ; 2. Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China)
出处
《中国中药杂志》
CAS
CSCD
北大核心
2018年第6期1124-1130,共7页
China Journal of Chinese Materia Medica
基金
国家自然科学基金项目(31101608)
陕西省普通高校青年杰出人才计划项目
咸阳市中青年科技领军人才项目
陕西中医药大学博士科研启动经费项目
陕西省自然科学基金项目(2017JM8030)
陕西省青年科技新星项目(2012KJXX-44)
关键词
铁皮石斛
己糖转运蛋白
克隆
序列分析
定量PCR
Dendrobium officinale
hexose transporter
cloning
sequence analysis
quantitative PCR