期刊文献+

现代代谢组学平台建设及相关技术应用 被引量:11

Current metabolomics platforms: technical composition and applications
下载PDF
导出
摘要 代谢组作为生命科学研究的5个层面(基因组、转录组、蛋白质组、代谢组和表型组)之一越来越受到科研工作者的关注。色谱-质谱联用技术由于其高分离能力、高灵敏度等优点在代谢组学(定性和定量)领域发挥重要的作用,基于色谱-质谱联用技术的代谢组学已成功应用于代谢表型差异研究、基因功能鉴定和转基因生物安全性评价等多个研究方向。本文以中国科学院遗传与发育生物学研究所代谢组学平台为例,详细介绍了现代代谢组学平台色谱-质谱联用仪器的硬件组成,以及不同技术平台在现在系统生物学研究中的具体应用。 Metabolomics (defined as comprehensive small molecule chemical analysis),together with genomics, transcriptomics,proteomics and phenomics,now plays a fundamental role in system biological studies.Chromatographymass spectrometry machines,which have the characteristics of high resolution and high sensitivity,are widely used for metabolomics analysis,both qualitatively and quantitatively.With the fast development of the chromatography-mass spectrometry technology,metabolomics analysis has been successfully applied in various biological research fields.Here, we introduce the different chromatography-mass spectrum machines used for metabolomics analysis and their applications to various biological issues by mainly using the metabolomics platform in Institute of Genetics and Developmental Biology as a case study.
作者 张凤霞 王国栋 Fengxia Zhang;Guodong Wang(State Key Laboratory of Plant Genomics,Institute of Genetics and Developmental Biology,Innovation Academy of Seed Design,Chinese Academy of Sciences,Beijing 100101,China)
出处 《遗传》 CAS CSCD 北大核心 2019年第9期883-892,共10页 Hereditas(Beijing)
基金 植物基因组学国家重点实验室(编号:SKLPG2016A-13,SKLPG2016B-13)资助~~
关键词 小分子化合物 代谢组学平台 色谱-质谱联用 系统生物学 small molecule chemicals metabolomics platform chromatography-mass spectrometry system biology
  • 相关文献

参考文献6

二级参考文献51

  • 1JiaqiangSUN,NaoyaHIROSE,XingchunWANG,PeiWEN,LiXUE,HitoshiSAKAKIBARA,JianruZUO.Arabidopsis SOI33/AtENT8 Gene Encodes a Putative Equilibrative Nucleoside Transporter That Is Involved in Cytokinin Transport In Planta[J].Journal of Integrative Plant Biology,2005,47(5):588-603. 被引量:16
  • 2Allen. E. Moing. A. Wattis. 1.A. Larson. T. Maucourt. M . Graham. I.A . Rolin. D . and Hooks. M.A. (2011). Evidence that ACN1 (acetate non-utilizing 1) prevents carbon leakage from peroxisomes during lipid mobilization in Arabidopsis seedlings. Biochem. J. 437, 505-513.
  • 3Anderson. M.D . Che. P. Song. 1.P. Nikolau. B.1 . and Wurtele. E.S. (1998). 3-Methylcrotonyl coenzyme A carboxylase is a compo?nent of the mitochondrial leucine catabolic pathway in plants. Plant Physiol. 118, 1127-1138.
  • 4Araujo. W.L. lshizaki, K . Nunes-Nesi. A . Larson. T.R . Tohge. T . Krahnert. I . Witt. 5 . Obata, T . Schauer. N . Graham. I.A . et al. (2010). Identification of the 2-hydroxyglutarate and isovaleryl?CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria. Plant Cell. 22, 1549-1563.
  • 5Batista. D . Fonseca. 5 . Serrazina. 5 . Figueiredo. A . and Pais. M.S. (200S). Efficient and stable transformation of hop (Humulus lupulus L.) var. Eroica by particle bombardment. Plant Cell Rep. 27, 1185-1196.
  • 6Binder. s. (2010). Branched-chain amino acid metabolism in Arabidopsis thaliana. The Arabidopsis Book/American Society of Plant Biologists. 8, e0137.
  • 7Chen. H . Kim. H.U . Weng. H . and Browse. 1. (2011). Malonyl-CoA synthetase, encoded by ACYL ACTIVATING ENZYME13, is essen?tial for growth and development of Arabidopsis. Plant Cell. 23, 2247-2262.
  • 8Dal, X . Wang. G . Yang. 0.5 . Tang. Y . Broun, P. Marks. M.D . Sumner, L.W., Dixon. R.A . and Zhao, P.X. (2010). TrichOME: a comparative omics database for plant trichomes. Plant Physiol. 152,44-54.
  • 9Dickinson. 1.R . Harrison. 5.1 . Dickinson, J.A . and Hewlins. M.l.E. (2000). An investigation of the metabolism of isoleucine to active amyl alcohol in Saccharomyces cerevisiae. J. BioI. Chem. 275, 10937-10942.
  • 10Facchini. P.l . Bohlmann. 1 Covello. P.S., De Luca. V . Mahadevan. R . Page. J.E . Ro, O.K . Sen sen. C.W . Storms. R . and Martin. V.1.J. (2012). Synthetic biosystems for the production of high?value plant metabolites. Trends in Biotechnology. 30,127-131.

共引文献47

同被引文献100

引证文献11

二级引证文献42

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部