期刊文献+

石墨烯与色氨酸相互作用模式的分子模拟研究 被引量:1

The Interaction Between the Graphene and Tryptophan by Molecular Simulation Method
下载PDF
导出
摘要 石墨烯是由单原子层组成的二维晶体,生物相容性好、比表面积大、稳定性好,目前被广泛应用于医药领域。本文采用密度泛函理论对色氨酸(Trp)以及两种不同尺寸的石墨烯CS(C62H20)和CL(C186H36)进行了热力学稳定能的计算探究。然后采用分子对接的方法对其进行分别对接并计算了复合物的对接能量,其结合能依次为:-4.62 kcal/mol(CS-Trp)、-4.92 kcal/mol(CL-Trp)。本文的结论为:石墨烯作为色氨酸载体具有一定的稳定性,且其稳定性与石墨烯尺寸大小存在一定关系。 Graphene is composed of a single atomic layer two-dimensional crystal,has a large specific surface area,good biological intermiscibility,good stability and other characteristics,as a drug carrier in recent years.The thermodynamic stability could be exploredby density functional theory(DFT)study for the optimizationof tryptophan(Trp)and two different sizes of graphene:C S(C 62 H 20),C L(C 186 H 36).Then,the molecular docking method was adopted to carry out docking,and the stability energy of the docking compounds was-4.62 kcal/mol(C S-Trp)and-4.92 kcal/mol(C L-Trp).The results showed that the graphene as tryptophan carrier has certain stability,and its stability and graphene size there is a certain relationship.
作者 童明琼 刘鹏 孙婉 范娜 王晓玥 Tong Mingqiong;Liu Peng;Sun Wan;Fan Na;Wang Xiaoyue(Medicine and Nursing Department of Dezhou University,Dezhou 253023,China;Dezhou University,Dezhou 253023,China)
出处 《山东化工》 CAS 2020年第22期11-12,共2页 Shandong Chemical Industry
基金 德州学院科研启动基金项目(No.2019xjrc336)。
关键词 石墨烯 色氨酸 分子优化 分子对接 graphene tryptophan molecular optimization molecular docking
  • 相关文献

参考文献4

二级参考文献50

  • 1杨琳,刘晓松,孙建立,沈福海,米涵,倪国颖,魏明.氧化石墨纳米颗粒吸附的5-氟尿嘧啶、抗体和细胞因子的体外生物活性研究[J].肿瘤防治研究,2014,41(4):340-344. 被引量:3
  • 2刘爱红,孙康宁,李爱民,魏源,孙昌.CNTs/HAp复合材料及其动物离体组织热效应研究[J].功能材料,2006,37(8):1322-1324. 被引量:5
  • 3尹峰,赵紫霞,吴宝艳,王新胜,王艳艳,陈强.基于多壁碳纳米管和聚丙烯胺层层自组装的葡萄糖生物传感器[J].分析化学,2007,35(7):1021-1024. 被引量:23
  • 4MENG Xuan-Yu, ZHANG Hong-Xing, MIHALY M, et al. Molecular Docking: A powerful application for struc- ture-based drug discovery [ J ]. Curr Comput Aided Drug Des,2011, 7(2): 146 -157.
  • 5BARRY L Stoddard, DANIEL E, KOSHLAND Jr. Pre- diction of the structure of a receptor-protein complex using a binary docking method[Jl. Nature, 1992, 358 (27): 774-776.
  • 6BERND K, MATTHIAS R, THOMAS L. Evaluation of the FLEXX incremental construction algorithm for pro- tein-ligand docking [ J ]. Proteins Struct Funct Genet, 2004, 37(2): 228-241.
  • 7CHEN Yu-Chian. Beware of dockingt [ J ]. Trends Pharmacol Sci,2015, 36(2) : 78 -95.
  • 8GARRETT M Morris, RUTH H, WILLIAM L, et al. AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility [ J]. Comput Chem, 2009, 30(16) : 2785 -2791.
  • 9LANG P T, BROZELL S R, MUKHERJEE S, et al. DOCK 6: combining techniques to model RNA-small molecule complexes[J]. RNA, 2009, 15(6): 1219- 1230.
  • 10VERDONK M L,COLE J C,HARTSHORN M J, et al. Improved protein-ligand docking using GOLD [ J ]. Proteins Struc Funct Genet,2003, 52 (4) : 609 - 623.

共引文献61

同被引文献6

引证文献1

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部