期刊文献+

The Faces of Fungi database:fungal names linked with morphology,phylogeny and human impacts 被引量:5

原文传递
导出
摘要 Taxonomic names are key links between various databases that store information on different organisms.Several global fungal nomenclural and taxonomic databases(notably Index Fungorum,Species Fungorum and MycoBank)can be sourced to find taxonomic details about fungi,while DNA sequence data can be sourced from NCBI,EBI and UNITE databases.Although the sequence data may be linked to a name,the quality of the metadata is variable and generally there is no corresponding link to images,descriptions or herbarium material.There is generally no way to establish the accuracy of the names in these genomic databases,other than whether the submission is from a reputable source.To tackle this problem,a new database(FacesofFungi),accessible at www.facesoffungi.org(FoF)has been established.This fungal database allows deposition of taxonomic data,phenotypic details and other useful data,which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification system.In addition,the database will also allow access to comprehensive metadata including descriptions of voucher and type specimens.This database is user-friendly,providing links and easy access between taxonomic ranks,with the classification system based primarily on molecular data(from the literature and via updated web-based phylogenetic trees),and to a lesser extent on morphological data when molecular data are unavailable.In FoF species are not only linked to the closest phylogenetic representatives,but also relevant data is provided,wherever available,on various applied aspects,such as ecological,industrial,quarantine and chemical uses.The data include the three main fungal groups(Ascomycota,Basidiomycota,Basal fungi)and fungus-like organisms.The FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological expertise.The webpage has 76 curators,and with the help of these specialists,FoF will provide an updated natural classification of the fungi,with illustrated accounts of species linked to molecular data.The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups.The structure and use of the database is then explained.We would like to invite all mycologists to contribute to these web pages.
出处 《Fungal Diversity》 SCIE 2015年第5期3-18,共16页 真菌多样性(英文)
基金 Wen are grateful to The National Natural Science Foundation of China(No.31460012,No.31200016).
  • 相关文献

同被引文献58

  • 1Nelsen M P, L~icklng R, Mbatchou J S, et al. New insights into relationships of lichen-forming Dothideomycetes [ J ]. Fungal Diversity, 2011, 51: 155-162.
  • 2Schoch C L, Sung G H, L6pez-Gir61dez F, et al, The Ascomyeota tree of life: a phylum-wide phylogeny clarifies the origin and e- volution of fundamental reproductive and ecological traits [ J ]. Systematic Biology, 2009b, 58: 224-239.
  • 3Schoch C L, Crous P W, Groenewald J Z, et al. A class-wide phylogenetic assessment of Dothideomycetes [ J 1. Studies in My- cology, 2009a, 64: 1-15.
  • 4Boonmee S, Zhang Y, Chomnunti P, et al. Revision of lignicolous Tubeufiaeeae based on morphological reexamination and phylo- genetic analysis [ J ]. Fungal Diversity, 2011, 51 : 63-102.
  • 5Boonmee S, Koko T W, Chukeatirote E, et al. Two new Kir- schsteiniothelia species with Dendryphiopsis anamorphs cluster in Kirschsteiniothe fam. nov[J]. Mycologia, 2012, 104:698-714.
  • 6Liu J K, Phookamsak R, Jones E B G, et al. AstrosphaerieUa is polyphyletic, with species in Fissuroma gen. nov. , and Neoastro- sphaeriella gen. nov[J]. Fungal Diversity, 2011, 51: 135-154.
  • 7Zhang Y, Crnus P W, Schoch C L, et al. A molecular, mor- phological and ecological re-appraisal of Ventur/ales--a new order of Dothideomycetes [ J ]. Fungal Diversity, 2011, 51 : 249-277.
  • 8Ariyawansa H A, Thambugala K M, Manamgoda D S, et al. Towards a natural classification and backbone tree for Pleospo- raceae[J]. Fungal Diversityity, 2015b, 71 : 85-139.
  • 9Clements F E. The genera of fungi [ M]. Minneapolis: The HW Wilson Company, 1909.
  • 10Simmons E G. Culture studies in the genera Pleospora, Clath- rospora, and Leptosphaeria[ J]. Mycologia, 1952, 44: 330-365.

引证文献5

二级引证文献1

  • 1Mark S.Calabon,Kevin D.Hyde,E.B.Gareth Jones,Zong-Long Luo,Wei Dong,Vedprakash G.Hurdeal,Eleni Gentekaki,Walter Rossi,Marco Leonardi,Vinodhini Thiyagaraja,Anis S.Lestari,Hong-Wei Shen,Dan-Feng Bao,Nattawut Boonyuen,Ming Zeng.Freshwater fungal number[J].Fungal Diversity,2022(3):3-235. 被引量:1

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部