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RadonPy:automated physical property calculation using all-atom classical molecular dynamics simulations for polymer informatics 被引量:3

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摘要 The spread of data-driven materials research has increased the need for systematically designed materials property databases.However,the development of polymer databases has lagged far behind other material systems.We present RadonPy,an open-source library that can automate the complete process of all-atom classical molecular dynamics(MD)simulations applicable to a wide variety of polymeric materials.Herein,15 different properties were calculated for more than 1000 amorphous polymers.The MD-calculated properties were systematically compared with experimental data to validate the calculation conditions;the bias and variance in the MD-calculated properties were successfully calibrated by a machine learning technique.During the high-throughput data production,we identified eight amorphous polymers with extremely high thermal conductivity(>0.4 W∙m^(–1)∙K^(–1))and their underlying mechanisms.Similar to the advancement of materials informatics since the advent of computational property databases for inorganic crystals,database construction using RadonPy will promote the development of polymer informatics.
出处 《npj Computational Materials》 SCIE EI CSCD 2022年第1期2155-2169,共15页 计算材料学(英文)
基金 The numerical calculations were conducted on the five supercomputer systems,Fugaku at the RIKEN Center for Computational Science,Kobe,Japan the supercomputer at the Research Center for Computational Science,Okazaki,Japan(Project:21-IMS-C126,22-IMS-C125) the supercomputer Ohtaka at the Supercomputer Center,the Institute for Solid State Physics,the University of Tokyo,Tokyo,Japan the supercomputer TSUBAME3.0 at the Tokyo Institute of Technology,Tokyo,Japan the supercomputer ABCI at the National Institute of Advanced Industrial Science and Technology,Tsukuba,Japan This work was supported by the following five grants:a JST CREST(Grant Number JPMJCR19I3 to J.M.and R.Y.) the MEXT as“Program for Promoting Researches on the Supercomputer Fugaku”(Project ID:hp210264 to R.Y.) the Grant-in-Aid for Scientific Research(A)from the Japan Society for the Promotion of Science(19H01132 to R.Y.) the Grant-in-Aid for Scientific Research(C)from the Japan Society for the Promotion of Science(22K11949 to Y.H.) the HPCI System Research Project(Project ID:hp210213 to Y.H.).
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