深圳汉族人群42个常染色体短串联重复序列基因座的遗传多态性

Genetic Polymorphism of 42 Autosomal STR Loci from Chinese Han Population in Shenzhen

【目的】调查深圳汉族人群42个常染色体短串联重复序列(STR)基因座(含41个非CODIS系统STR基因座)等位基因的遗传多态性,研究其在法医鉴定中的应用价值。【方法】采用AGCU21+1和阅微MR23荧光扩增试剂盒对深圳汉族人群435个无关个体STR基因座进行序列多态性分析。通过Modified-Powerstates和arlequin v3.5软件统计等位基因频率、法医遗传学参数并进行Hardy-Weinberg平衡检验。【结果】深圳汉族人群435个无关个体共检出418个等位基因,均符合Hardy-Weinberg平衡定律(P>0.05/42),频率分布在0.0011~0.5529之间。D1S1656和D21S1270基因座多态性最高,均检出16个等位基因;D4S2408基因座检出的等位基因最少;个体识别能力(DP)为0.7988(D1S1627)~0.9686(D7S3048),多态性信息含量(PIC)为0.5680(D1S1627)~0.8598(D7S3048),杂合度(H)为0.6276(D1S1627)~0.8782(D20S470)。【结论】42个常染色体STR基因座的等位基因在深圳地区汉族群体遗传多态性较好,具有较高的个体识别能力,在个体识别和亲权鉴定尤其是单亲或出现基因突变的情况下具有较高的应用价值;所得的数据亦为STR群体遗传学提供基础数据。

【Objective】To investigate the genetic polymorphism of 42 short tandem repeats(STRs),including 41 non-CODIS loci from the Shenzhen Han population and evaluate their potential values in forensic application.【Methods】In our research,the AGCU 21+1 STR kit and Microreader™23sp Direct ID System were applied to analyze the polymorphism of STR loci from 435 unrelated individuals of Shenzhen Han population.Modified-Powerstates and Arlequin v3.5 software were used to analyze the allele frequencies and forensic parameters,and perform the Hardy-Weinberg equilibrium test.【Results】A total of 418 alleles were detected from 435 unrelated individuals in Shenzhen,all consistent with Hardy-Weinberg equilibrium(P>0.05/42),with the allele frequency ranging from 0.0011 to 0.5529.Besides,the discrimination power(DP)ranged from 0.7988(D1S1627)to 0.9686(D7S3048),the polymorphic information content(PIC)ranged from 0.5680(D1S1627)to 0.8598(D7S3048),and the heterozygosity(H)ranged from 0.6276(D1S1627)to 0.8782(D20S470).Among all the STRs tested in the study,both D1S1656 and D21S1270 have 16 alleles and show the highest polymorphism.In comparison,only five alleles were observed in the D4S2408 locus,which displays the least polymorphism.【Conclusions】The 42 autosomal STR loci with high genetic polymorphism in Shenzhen Han population showed potential as an effective means for individual identification and paternity testing,especially in the cases with single parent or mutation detected.The obtained information can provide basic data for STR population genetics.