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Aqueous COmputing:A Survey with an Invitation to Participate

Aqueous Computing: A Survey with an Invitation to Participate
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摘要 The concept of aqueous computing is presented here, first in full generality,and afterward, using an implementation in a specific enzymatic technology. Aqueous computing arosein the context of biomolecular (DNA) computing, but the concept is independent of the specifics ofits biochemical origin. Alternate technologies for realizing aqueous computing are being consideredfor future implementation. A solution of an instance of the Boolean satisfiability problem, (SAT),is reported here that provides a new example of an aqueous computation that has been carried outsuccessfully. This small instance of the SAT problem is sufficiently complex to allow our currentenzymatic technology to be illustrated in detail. The reader is invited to participate in the richinterdisciplinary activity required by wet lab computing. A project is suggested to the reader fordetermining the three-colorings of a graph. The basic operations required for this project areexhibited in the solution of the SAT example reported here. The concept of aqueous computing is presented here, first in full generality,and afterward, using an implementation in a specific enzymatic technology. Aqueous computing arosein the context of biomolecular (DNA) computing, but the concept is independent of the specifics ofits biochemical origin. Alternate technologies for realizing aqueous computing are being consideredfor future implementation. A solution of an instance of the Boolean satisfiability problem, (SAT),is reported here that provides a new example of an aqueous computation that has been carried outsuccessfully. This small instance of the SAT problem is sufficiently complex to allow our currentenzymatic technology to be illustrated in detail. The reader is invited to participate in the richinterdisciplinary activity required by wet lab computing. A project is suggested to the reader fordetermining the three-colorings of a graph. The basic operations required for this project areexhibited in the solution of the SAT example reported here.
出处 《Journal of Computer Science & Technology》 SCIE EI CSCD 2002年第6期672-681,共10页 计算机科学技术学报(英文版)
基金 国家自然科学基金,the Leiden Center for Natural Computing, and the Leiden Institute for Advanced Computer Science
关键词 aqueous computing biomolecular computing DNA computing enzymaticcomputing fluid memory graph three-colorings aqueous computing biomolecular computing DNA computing enzymaticcomputing fluid memory graph three-colorings
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