期刊文献+

基于JavaScript的生物信息学分析系统的优化和扩展 被引量:1

The extension and optimization of the system for bioinformatics analysis based on JavaScript
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摘要 对基于JavaScript的SMS核酸和蛋白质序列分析系统进行了改进,汉化并优化了系统界面,对系统中多序列同源性分析和引物搜索设计进行了较大幅度的改进,以提高精确度和实用性,增加了基于JavaScript的蛋白质理化性质曲线分析功能。为生物信息学和生物序列研究提供了更为有效的工具。 The SMS system for nucleic acid and protein analysis based on JavaScript was progressed with Chinese version and optimal interface. In order to increasing the accuracy and practicality, the functions of alignment and primer design were improved. New function to draw physical and chemical analysis plot of protein was added. This system provides more wieldy tools for bioinformatics and biomolecular sequences research .
出处 《计算机与应用化学》 CAS CSCD 北大核心 2003年第1期49-51,共3页 Computers and Applied Chemistry
关键词 生物信息学 序列分析 优化 JAVASCRIPT bioinfonnatics sequence analysis optimization JavaScript
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参考文献12

  • 1Stothard P. The sequence manipulation suite: Java,Script programs for analyzing and formatting protein and DNA sequences. BioTechniques,2000, 28:1102-1104.
  • 2Thompson J D, Higgins D G, Gibson T J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 1994, 22:4673-4680.
  • 3Dayhoff M O, Schwartz R M, Orcutt B C. Atlas of Protein Sequence and Structure. Washington D C: National Biomedical Research Foundation,1978, (5) :345-352.
  • 4Henikoff S, Henikoff J G. Amino acid substitution matrix from protein blocks. Proc Natl Acad Sci USA, 1992, 89:10915-10919.
  • 5Freier S M, Kierzek R, Jaeger J A, et al. Improved free-energy parameters for predictions of RNA duplex stability. Proc Natl Acad Sci USA,1986, 83:9373-9377.
  • 6Sugimoto N. Relationship between Structure and Function of Nucleic Acids: The Study Using Nearest Neighbor Parameters. Japan: Konan University Internal Publication, 1993, 33:61-67.
  • 7Kyte J, Doolittle R F. A simple method for displaying the hydropathic character of a protein. J Mol Biol, 1982, 157(1) :105-32.
  • 8Cowan R, Whittaker R G. Hydrophobicity indices for amino acid residues as determined by high-performance liquid chromatography. Pept Res,1990, 3(2) :75-80.
  • 9Welling G W, Weijer W J, Zee R V, et al. Prediction of sequential antigenic regions in proteins. FEBS Lett, 1985, 188(2) :215-8.
  • 10Rossini A A, Greiner D L, Mordes J P. Induction of Immunologic Tolerance for Transplantation. Physiol Rev, 1999, 79:99-141.

同被引文献7

  • 1Attwood T K;Parry-Smith D J.Introduction to bioinformatics,1999.
  • 2Etzold T;Ulyanov A;Argos P.SRS:Information Retrieveal System for Molecular Biology Data Banks,1996.
  • 3Rice P;Longden I;Bleasby A.EMBOSS:The European Molecular Biology Open Software Suite[J],2000(06).
  • 4Stothard P.The sequence manipulation suite:JavaScript programs for analyzing and formatting protein and DNA sequences,2000.
  • 5Rozen S;Skaletsky H.Primer3 on the WWW for general users and for biologist programmers,2000.
  • 6孙焕东,张成岗,贺福初.一个基于Blast程序的多重序列对齐程序——Mblast[J].生物化学与生物物理进展,2001,28(3):419-422. 被引量:3
  • 7张成岗,张利达,欧阳曙光,张启发,贺福初.序列同源性分析软件Blast的WEB界面构建及其应用[J].生物化学与生物物理进展,2001,28(6):916-918. 被引量:8

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