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Characterizing Long-range Correlation Properties in Nucleotide Sequences

Characterizing Long-range Correlation Properties in Nucleotide Sequences
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摘要 Using continuous wavelet transform as the analytical tool, the fractal characteristic of nucleotide sequences was studied. The fractal dimension of the exon and intron sequences for different species was calculated. We use the Mexican hat wavelet function as the mother wavelet and Hurst exponent to describe the long-range correlation. It is found that the Hurst exponent of intron sequence is larger than that of exon sequence for the same gene. Using continuous wavelet transform as the analytical tool, the fractal characteristic of nucleotide sequences was studied. The fractal dimension of the exon and intron sequences for different species was calculated. We use the Mexican hat wavelet function as the mother wavelet and Hurst exponent to describe the long-range correlation. It is found that the Hurst exponent of intron sequence is larger than that of exon sequence for the same gene.
出处 《Chinese Chemical Letters》 SCIE CAS CSCD 2003年第5期503-504,共2页 中国化学快报(英文版)
基金 This work was supported by the Provincial Natural Science Foundation of Guangdong(Contract 990944) the National Natural Science Foundation of China(Contract 20205003,29975033).
关键词 Nucleotide sequences long-range correlation wavelet transform. Nucleotide sequences, long-range correlation, wavelet transform.
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