期刊文献+

基于格子模型的蛋白质设计方法 被引量:3

A Protein Design Procedure Based on The Lattice Model
下载PDF
导出
摘要  提出一个简单有效的蛋白质设计方法 ,这一方法完全基于物理学原理 .与同类工作相比 ,该方法在很大程度上可节省对序列空间进行的搜索 ,是对同类工作的简化与发展 .对三个平面格子模型进行的检验表明该方法是成功的 . A new simple and effective approach completely based on the physical theory is proposed for protein design. Compared with the similar works, the algorithm saves a vast deal of trouble in exploring sequence space. The method is an improvement over previous works. The design procedure was tested on three lattice models in two dimensions and the successful results have been obtained. The method can be readily implemented for three dimensional off lattice models of real proteins.
出处 《生物化学与生物物理进展》 SCIE CAS CSCD 北大核心 2004年第2期172-176,共5页 Progress In Biochemistry and Biophysics
基金 国家自然科学基金 ( 10 1740 0 5 3 0 170 2 3 0 ) 北京市自然科学基金 ( 5 0 3 2 0 0 2 )资助项目
关键词 蛋白质 设计方法 蛋白质逆折叠 格子模型 非格子模型 protein design, inverse protein folding, lattice model, off lattice model
  • 相关文献

参考文献14

  • 1[1]Bryngelson J, Onuchic J N, Socci N D, et al. Funnels, pathways,and the energy landscape of protein folding. Proteins, 1995, 21(3): 167~195
  • 2[2]Fersht A. Nucleation mechanism of protein folding. Curr Opin Struct Biol, 1997, 7 (1): 10~14
  • 3[3]Shakhnovich E I. Theoretical studies of protein-folding. Curr Opin Struct Biol, 1997, 7 (l): 29 ~40
  • 4[4]Li H, Helling R, Tang C, et al. Emergence of preferred structures in a simple model of protein folding. Science, 1996, 273 (2): 666~ 669
  • 5[5]Shakhnovich E 1, Gut in A M. Engineering of stable and fast-folding sequences of model proteins. Proc Natl Acad Sci USA, 1993, 90(15): 7195 ~7199
  • 6[6]Kurosky T, Deutsch J M. Design of copolymeric materials. J Phys A: Math Gen, 1995, 27 (14): L387~ L393
  • 7[7]Deutsch J M, Kurosky T. New algorithm for protein design. Phys Rev Leu, 1996, 76 (2): 323 ~326
  • 8[8]Seno F, Vendruscolo M, Maritan A, et al. Optimal protein design procedure. Phys Rev Lett, 1996, 77 (9): 1901 ~ 1904
  • 9[9]Wang B H, Yun Z X, Wang Z X, et al. A unified design approach for the inverse folding and direct folding of protein. J Bioscience,1999, 24 (suppl 1): 61
  • 10[12]Dill K A. Dominant forces in protein folding. Biochemistry, 1990,29 (31): 7133 ~7154

同被引文献22

引证文献3

二级引证文献4

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部