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Bioinformatics Analysis of the Relationship between Dilated Cardiomyopathy and Chronic Heart Failure

Bioinformatics Analysis of the Relationship between Dilated Cardiomyopathy and Chronic Heart Failure
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摘要 Objective: To screen and analyze the differentially expressed genes between dilated cardiomyopathy (DCM) and chronic heart failure (CHF) based on bioinformatics methods. Methods: The Gene Expression Omnibus (GEO) database was used for data retrieval, and the chip data GSE3585 was downloaded, which was the original data of DCM and normal control group. At the same time, the chip data GSE76701 was downloaded, which was the original data of CHF and control group. Differentially expressed mRNAs (DEmRNAs) were screened by R language limma package, the data were standardized, and the common differentially expressed genes were screened. GO function and KEGG pathway enrichment analysis were performed on the common differentially expressed genes. String11.0 online tool was used for data analysis to obtain differentially expressed genes, and the results were imported into Cytoscape 3.9.1 software. The results were imported into Cytoscape 3.9.1 software, and the common expression gene module was obtained by MOCDE algorithm. Nine Hub genes were obtained by 10 algorithms such as MCC. Results: A total of 248 differentially expressed genes were screened. GO analysis showed that differentially expressed genes were mainly concentrated in 9 different physiological and pathological processes. KEGG analysis showed that the main signaling pathways involved in differentially expressed genes were 2, and 9 key differentially expressed genes were predicted: NPPB, NPPA, MYH6, FRZB, ASPN, SFRP4, RPS4Y1, DDX3Y. Conclusion: This study preliminarily explored the molecular mechanism of DCM and CHF, and obtained the common differentially expressed genes of the two diseases. Further experimental studies are needed to verify the correlation between gene expression and clinicopathological features. Provide new ideas for clinical drug treatment research. Objective: To screen and analyze the differentially expressed genes between dilated cardiomyopathy (DCM) and chronic heart failure (CHF) based on bioinformatics methods. Methods: The Gene Expression Omnibus (GEO) database was used for data retrieval, and the chip data GSE3585 was downloaded, which was the original data of DCM and normal control group. At the same time, the chip data GSE76701 was downloaded, which was the original data of CHF and control group. Differentially expressed mRNAs (DEmRNAs) were screened by R language limma package, the data were standardized, and the common differentially expressed genes were screened. GO function and KEGG pathway enrichment analysis were performed on the common differentially expressed genes. String11.0 online tool was used for data analysis to obtain differentially expressed genes, and the results were imported into Cytoscape 3.9.1 software. The results were imported into Cytoscape 3.9.1 software, and the common expression gene module was obtained by MOCDE algorithm. Nine Hub genes were obtained by 10 algorithms such as MCC. Results: A total of 248 differentially expressed genes were screened. GO analysis showed that differentially expressed genes were mainly concentrated in 9 different physiological and pathological processes. KEGG analysis showed that the main signaling pathways involved in differentially expressed genes were 2, and 9 key differentially expressed genes were predicted: NPPB, NPPA, MYH6, FRZB, ASPN, SFRP4, RPS4Y1, DDX3Y. Conclusion: This study preliminarily explored the molecular mechanism of DCM and CHF, and obtained the common differentially expressed genes of the two diseases. Further experimental studies are needed to verify the correlation between gene expression and clinicopathological features. Provide new ideas for clinical drug treatment research.
作者 Lanqing Yu Haidong Zhou Bailu Deng Jiaochang Wei Mei Zhang Chongyao Xu Guiyun Wei Junxiu Zhou Jun Huang Qi Lu Shaowu Ye Lanqing Yu;Haidong Zhou;Bailu Deng;Jiaochang Wei;Mei Zhang;Chongyao Xu;Guiyun Wei;Junxiu Zhou;Jun Huang;Qi Lu;Shaowu Ye(Graduate School, Youjiang Medical University for Nationalities, Baise, China;Clinical Medical College, Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, China;Department of Internal Medicine, The Peoples Hospital of Wuzhou, Wuzhou, China;Pharmaceutical College, Guangxi Medical University, Nanning, China;Department of Pharmacy, Guangxi Zhuang Autonomous Region Maternal and Child Health Hospital, Nanning, China;Department of Pharmacy, Baise Maternal and Child Hospital, Baise, China;Orthopedic Trauma, Napo Peoples Hospital, Baise, China;Department of Internal Medicine, Wuzhou Gongren Hospital, Wuzhou, China)
出处 《Journal of Biosciences and Medicines》 2024年第8期333-346,共14页 生物科学与医学(英文)
关键词 Dilated Cardiomyopathy Chronic Heart Failure Bioinformatics Analysis Differentially Expressed Genes Dilated Cardiomyopathy Chronic Heart Failure Bioinformatics Analysis Differentially Expressed Genes
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