(一)植物的生物化学(The Biochemistry of Plants)丛书简介 1.《植物细胞》(The Plant Cell)1980 2.《代谢与呼吸》(Metabolism and Respiration)1980 3.《糖类:结构与功能》(Carbohydrates:Structure and Function)1980 4.《脂类:结构...(一)植物的生物化学(The Biochemistry of Plants)丛书简介 1.《植物细胞》(The Plant Cell)1980 2.《代谢与呼吸》(Metabolism and Respiration)1980 3.《糖类:结构与功能》(Carbohydrates:Structure and Function)1980 4.《脂类:结构与功能》(Lipids:Structure and Function)1980 5.《氨基酸及其衍生物》(Amino Acids and Derivatives)1980 6.《蛋白质与核酸》(Proteins and Nucleic Acids)展开更多
The pattern of codon usage in the chloroplast genome of Populus alba was investigated. Correspondence analysis （a commonly used multivariate statistical approach） and method of effective number of codons （ENc）-plo...The pattern of codon usage in the chloroplast genome of Populus alba was investigated. Correspondence analysis （a commonly used multivariate statistical approach） and method of effective number of codons （ENc）-plot were conducted to analyze synonymous codon usage. The results of correspondence analysis showed that the distribution of genes on the major axis was significantly correlated with the frequency of use of G＋C in synonymously variable third position of sense codon （GC3S）, （r=0.349）, and the positions of genes on the axis 2 and axis 3 were significantly correlated with CAI （r=-0.348, p〈0.01 and r=0.602, p〈0.01）. The ENc for most genes was similar to that for the expected ENc based on the GC3s, but several genes with low ENc values were lying below the expected curve. All of these data indicated that codon usage was dominated by a mutational bias in chloroplast gcnome ofP. alba. The selection in nature for translational efficiency only played a minor role in shaping codon usage in the chloroplast genome ofP alba.展开更多
Genomic selection(GS) as a promising molecular breeding strategy has been widely implemented and evaluated for plant breeding, because it has remarkable superiority in enhancing genetic gain, reducing breeding time an...Genomic selection(GS) as a promising molecular breeding strategy has been widely implemented and evaluated for plant breeding, because it has remarkable superiority in enhancing genetic gain, reducing breeding time and expenditure, and accelerating the breeding process. In this study the factors affecting prediction accuracy(rMG) in GS were evaluated systematically, using six agronomic traits(plant height, ear height, ear length, ear diameter,grain yield per plant and hundred-kernel weight) evaluated in one natural and two biparental populations. The factors examined included marker density, population size, heritability,statistical model, population relationships and the ratio of population size between the training and testing sets, the last being revealed by resampling individuals in different proportions from a population. Prediction accuracy continuously increased as marker density and population size increased and was positively correlated with heritability; rMGshowed a slight gain when the training set increased to three times as large as the testing set. Low predictive performance between unrelated populations could be attributed to different allele frequencies, and predictive ability and prediction accuracy could be improved by including more related lines in the training population. Among the seven statistical models examined, including ridge regression best linear unbiased prediction(RR-BLUP), genomic BLUP(GBLUP), Bayes A, Bayes B, Bayes C, Bayesian least absolute shrinkage and selection operator(Bayesian LASSO), and reproducing kernel Hilbert space(RKHS), the RKHS and additive-dominance model(Add + Dom model) showed credible ability for capturing non-additive effects, particularly for complex traits with low heritability. Empirical evidence generated in this study for GS-relevant factors will help plant breeders to develop GS-assisted breeding strategies for more efficient development of varieties.展开更多
Invertase is a key enzyme in sucrose catabolism and crucial for plant assimilate distribution. With the development of molecularbiology, a lot of invertsae genes were cloned recently, and significant progress have bee...Invertase is a key enzyme in sucrose catabolism and crucial for plant assimilate distribution. With the development of molecularbiology, a lot of invertsae genes were cloned recently, and significant progress have been made in regulators on the expression of invertase genes.Thus, this article summarized theresearch progress of invertase in biological characteristics, molecular characteristics and expression regulation.展开更多
Cassava is vulnerable to frost and snow, so it is suitable for planting in tropical and subtropical region. Low temperature is an important environment factor affecting the growth and development and production of cas...Cassava is vulnerable to frost and snow, so it is suitable for planting in tropical and subtropical region. Low temperature is an important environment factor affecting the growth and development and production of cassava, and the region with annual average temperature below 15 ℃ is not conducive to its normal growth and development. The improvement of cold resistance of cassava can increase the planting area and improve the yield and quality of cassava. In this study, morphological,physiological and biochemical and molecular researches on cold resistance of cassava, as well as the latest research progress,were reviewed in this paper. At the same time, some potential difficulties in the research on cold resistance of cassava were put forward, and the future work focus was also discussed.展开更多
Potato is the main material of nutrition comes after the wheat and, is subjected to attacks of different plant parasitic nematodes which cause serious damages in our country. Especially, root-knot nematodes cause seri...Potato is the main material of nutrition comes after the wheat and, is subjected to attacks of different plant parasitic nematodes which cause serious damages in our country. Especially, root-knot nematodes cause serious crop losses on them. Due to usage oflnfested seeds, parasitic nematodes are increasing from year to year. In our country, so far, many infested hosts of Meloidogyne incognita （Kofoid ＆White, 1919） Chitwood, 1949 were detected but there is no report on investigation on potato. During this study, adult females of root-knot nematodes were obtained via extracting gals of 133 tuber samples, collected potatoes fields in the Marmara region especially Balikesir, Bilecik, Bursa, Canakkale, Edirne, Istanbul, Kirklareli, Kocaeli, Sakarya and Tekirdag provinces during 2007-2008. During identification the species, second stage larvae were taken into consideration as well as genital preparations of adult females. For the identification classical methods were used together with molecular methods. As result, M. incognita was detected, only species detected among the Meloidogyne genus upon the 10 provinces investigated in Edirne province, Bosna village. This is the first report of the infestation of this species potato and also in Marmara Region.展开更多
文摘(一)植物的生物化学(The Biochemistry of Plants)丛书简介 1.《植物细胞》(The Plant Cell)1980 2.《代谢与呼吸》(Metabolism and Respiration)1980 3.《糖类:结构与功能》(Carbohydrates:Structure and Function)1980 4.《脂类:结构与功能》(Lipids:Structure and Function)1980 5.《氨基酸及其衍生物》(Amino Acids and Derivatives)1980 6.《蛋白质与核酸》(Proteins and Nucleic Acids)
基金supported by the National High Tech Development Project of Chinathe 863 Program (Grant Nos.2007AA02Z329)the National Natural Science Foundation of China (Grant Nos.20060213024).
文摘The pattern of codon usage in the chloroplast genome of Populus alba was investigated. Correspondence analysis （a commonly used multivariate statistical approach） and method of effective number of codons （ENc）-plot were conducted to analyze synonymous codon usage. The results of correspondence analysis showed that the distribution of genes on the major axis was significantly correlated with the frequency of use of G＋C in synonymously variable third position of sense codon （GC3S）, （r=0.349）, and the positions of genes on the axis 2 and axis 3 were significantly correlated with CAI （r=-0.348, p〈0.01 and r=0.602, p〈0.01）. The ENc for most genes was similar to that for the expected ENc based on the GC3s, but several genes with low ENc values were lying below the expected curve. All of these data indicated that codon usage was dominated by a mutational bias in chloroplast gcnome ofP. alba. The selection in nature for translational efficiency only played a minor role in shaping codon usage in the chloroplast genome ofP alba.
基金supported by the National Basic Research Program of China(2014 CB138206)National Key Research and Development Program of China(2016YFD0101803)+3 种基金the National Natural Science Foundation of China-CGIAR International Collaborative Program(31361140364)the Agricultural Science and Technology Innovation Program(ASTIP)of CAASFundamental Research Funds for Central Non-Profit of Institute of Crop Sciences,CAAS(1610092016124)supported by the Bill and Melinda Gates Foundation and the CGIAR Research Program MAIZE
文摘Genomic selection(GS) as a promising molecular breeding strategy has been widely implemented and evaluated for plant breeding, because it has remarkable superiority in enhancing genetic gain, reducing breeding time and expenditure, and accelerating the breeding process. In this study the factors affecting prediction accuracy(rMG) in GS were evaluated systematically, using six agronomic traits(plant height, ear height, ear length, ear diameter,grain yield per plant and hundred-kernel weight) evaluated in one natural and two biparental populations. The factors examined included marker density, population size, heritability,statistical model, population relationships and the ratio of population size between the training and testing sets, the last being revealed by resampling individuals in different proportions from a population. Prediction accuracy continuously increased as marker density and population size increased and was positively correlated with heritability; rMGshowed a slight gain when the training set increased to three times as large as the testing set. Low predictive performance between unrelated populations could be attributed to different allele frequencies, and predictive ability and prediction accuracy could be improved by including more related lines in the training population. Among the seven statistical models examined, including ridge regression best linear unbiased prediction(RR-BLUP), genomic BLUP(GBLUP), Bayes A, Bayes B, Bayes C, Bayesian least absolute shrinkage and selection operator(Bayesian LASSO), and reproducing kernel Hilbert space(RKHS), the RKHS and additive-dominance model(Add + Dom model) showed credible ability for capturing non-additive effects, particularly for complex traits with low heritability. Empirical evidence generated in this study for GS-relevant factors will help plant breeders to develop GS-assisted breeding strategies for more efficient development of varieties.
文摘Invertase is a key enzyme in sucrose catabolism and crucial for plant assimilate distribution. With the development of molecularbiology, a lot of invertsae genes were cloned recently, and significant progress have been made in regulators on the expression of invertase genes.Thus, this article summarized theresearch progress of invertase in biological characteristics, molecular characteristics and expression regulation.
基金Supported by Earmarked Fund for China Agriculture Research System(CARS-11-cssy)
文摘Cassava is vulnerable to frost and snow, so it is suitable for planting in tropical and subtropical region. Low temperature is an important environment factor affecting the growth and development and production of cassava, and the region with annual average temperature below 15 ℃ is not conducive to its normal growth and development. The improvement of cold resistance of cassava can increase the planting area and improve the yield and quality of cassava. In this study, morphological,physiological and biochemical and molecular researches on cold resistance of cassava, as well as the latest research progress,were reviewed in this paper. At the same time, some potential difficulties in the research on cold resistance of cassava were put forward, and the future work focus was also discussed.
文摘Potato is the main material of nutrition comes after the wheat and, is subjected to attacks of different plant parasitic nematodes which cause serious damages in our country. Especially, root-knot nematodes cause serious crop losses on them. Due to usage oflnfested seeds, parasitic nematodes are increasing from year to year. In our country, so far, many infested hosts of Meloidogyne incognita （Kofoid ＆White, 1919） Chitwood, 1949 were detected but there is no report on investigation on potato. During this study, adult females of root-knot nematodes were obtained via extracting gals of 133 tuber samples, collected potatoes fields in the Marmara region especially Balikesir, Bilecik, Bursa, Canakkale, Edirne, Istanbul, Kirklareli, Kocaeli, Sakarya and Tekirdag provinces during 2007-2008. During identification the species, second stage larvae were taken into consideration as well as genital preparations of adult females. For the identification classical methods were used together with molecular methods. As result, M. incognita was detected, only species detected among the Meloidogyne genus upon the 10 provinces investigated in Edirne province, Bosna village. This is the first report of the infestation of this species potato and also in Marmara Region.
