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High-coverage proteome analysis reveals the first insight of protein modification systems in the pathogenic spirochete Leptospira interrogans 被引量:8
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作者 Xing-Jun Cao Jie Dai +10 位作者 Hao Xu Song Nie Xiao Chang bao-yu hu Quan-hu Sheng Lian-Shui Wang Zhi-Bin Ning Yi-Xue Li Xiao-Kui Guo Guo-Ping Zhao Rong Zeng 《Cell Research》 SCIE CAS CSCD 2010年第2期197-210,共14页
Leptospirosis is a widespread zoonotic disease caused by pathogenic spirochetes of the genus Leptospira that infects humans and a wide range of animals. By combining computational prediction and high-accuracy tandem m... Leptospirosis is a widespread zoonotic disease caused by pathogenic spirochetes of the genus Leptospira that infects humans and a wide range of animals. By combining computational prediction and high-accuracy tandem mass spectra, we revised the genome annotation of Leptospira interrogans serovar Lai, a free-living pathogenic spirochete responsible for leptospirosis, providing substantial peptide evidence for novel genes and new gene boundaries. Subsequently, we presented a high-coverage proteome analysis of protein expression and multiple posttranslational modifications (PTMs). Approximately 64.3% of the predicted L. interrogans proteins were cataloged by detecting 2 540 proteins. Meanwhile, a profile of multiple PTMs was concurrently established, containing in total 32 phosphorylated, 46 acetylated and 155 methylated proteins. The PTM systems in the serovar Lai show unique features. Unique eukaryotic-like features of L. interrogans protein modifications were demonstrated in both phosphorylation and arginine methylation. This systematic analysis provides not only comprehensive information of high-coverage protein expression and multiple modifications in prokaryotes but also a view suggesting that the evolutionarily primitive L. interrogans shares significant similarities in protein modification systems with eukaryotes. 展开更多
关键词 Leptospira interrogans posttranslational modification eukaryotic-like evolutionary conservation
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城市公交-地铁加权复合网络构建及鲁棒性分析 被引量:9
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作者 潘恒彦 张文会 +3 位作者 胡宝雨 刘尊严 王永岗 张枭 《吉林大学学报(工学版)》 EI CAS CSCD 北大核心 2022年第11期2582-2591,共10页
基于复杂网络理论,本文将地铁、公交实际运营特性考虑其中,构建了加权复合网络,提出“出行成功率”与“绕行系数”两个鲁棒性评价新指标,以及更贴近于实际的2种新型攻击方式A与B。通过仿真实验,统计在蓄意攻击、随机攻击2类攻击策略的3... 基于复杂网络理论,本文将地铁、公交实际运营特性考虑其中,构建了加权复合网络,提出“出行成功率”与“绕行系数”两个鲁棒性评价新指标,以及更贴近于实际的2种新型攻击方式A与B。通过仿真实验,统计在蓄意攻击、随机攻击2类攻击策略的3种攻击模型下,加权复合网络评价指标(网络效率、最大连通子图率、绕行系数以及出行成功率)的变化情况,分析复合加权网络分别在蓄意攻击与随机攻击下,对上述3种攻击模型的鲁棒特性。结果表明:受到蓄意攻击时,绕行可达方面,复合网络对新型攻击方式A与B的鲁棒性能高于传统攻击方式;出行成功率方面,复合网络对新型攻击方式A的鲁棒性高于对传统攻击方式与新型方式B的鲁棒性。随机攻击下,绕行系数方面,复合网络对3种攻击模式呈现出的鲁棒性交替变化;出行成功率方面,对3者的鲁棒性为:新型攻击方式A>新型攻击方式B>传统攻击方式。 展开更多
关键词 交通运输系统工程 复杂网络理论 加权复合网络 蓄意攻击 随机攻击 鲁棒性
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