多个模型被用于印度洋长鳍金枪鱼(Thunnus alalunga)的资源评估,但这些模型的评估结果均存在较大的不确定性,为此,本文对影响印度洋长鳍金枪鱼资源评估的因素进行了分析。分析结果认为:(1)由于渔业数据存在不报、漏报或混报及采样样本...多个模型被用于印度洋长鳍金枪鱼(Thunnus alalunga)的资源评估,但这些模型的评估结果均存在较大的不确定性,为此,本文对影响印度洋长鳍金枪鱼资源评估的因素进行了分析。分析结果认为:(1)由于渔业数据存在不报、漏报或混报及采样样本数过低、采样协议出现变化等问题,造成印度洋长鳍金枪鱼渔业的渔获量、体长组成或年龄组成数据存在质量问题;(2)尽管对单位捕捞努力渔获量(catch per unit effort,CPUE)进行了标准化,但目标鱼种变化及捕捞努力量空间分布变化仍严重影响了标准化CPUE数据的质量;(3)印度洋长鳍金枪鱼的种群生态学及繁殖生物学研究仍比较薄弱,种群结构、繁殖、生长、自然死亡信息比较缺乏,在资源评估中,相关参数设置需借用其他洋区的研究结果;(4)海洋环境对印度洋长鳍金枪鱼的资源变动与空间分布具有显著影响,但评估模型较少考虑海洋环境的影响。由于上述问题的存在,导致当前评估结果存在较大不确定性。未来,应继续探索提高资源评估质量的方法,同时研究建立管理策略评价框架,以避免渔业资源评估结果的不确定性对该渔业可持续开发的影响。展开更多
利用贝叶斯生物量动态模型对印度洋黄鳍金枪鱼(Thunnus albacares)资源进行了评估,并分析了不同标准化单位捕捞努力渔获量(catch per unit effort,CPUE)、内禀增长率(r)先验分布对评估结果的影响。结果表明:(1)模型能较好拟合日本延绳...利用贝叶斯生物量动态模型对印度洋黄鳍金枪鱼(Thunnus albacares)资源进行了评估,并分析了不同标准化单位捕捞努力渔获量(catch per unit effort,CPUE)、内禀增长率(r)先验分布对评估结果的影响。结果表明:(1)模型能较好拟合日本延绳钓渔业的标准化CPUE,但对中国台湾延绳钓渔业的标准化CPUE拟合较差;当模型单独使用日本标准化CPUE时,评估结果显示印度洋黄鳍金枪鱼被过度捕捞;若模型单独使用中国台湾标准化CPUE,则结果相反,显示印度洋黄鳍金枪鱼未被过度捕捞;而当同时使用两个标准化CPUE时,日本标准化CPUE数据获得更大估计权重,因此,评估结果与单独使用日本标准化CPUE的结果类似。(2)当r采用无信息先验时,r估计偏小,而环境容纳量(K)估计则偏大,参数估计不合理;当r采用信息先验时,r与K的后验分布估计相对合理;由于r与K存在显著的负相关关系,生物量动态模型难于同时有效估计这两个参数,特别是在数据质量较差情况下,因而采用信息先验能提高生物量动态模型参数估计的质量。(3)本研究利用偏差信息准则(Deviance Information Criterion,DIC)与均方误差(Mean Square Error,MSE)统计量对模型进行了比较,并选择模型S8用于评价印度洋黄鳍金枪鱼的资源状态。评估结果认为印度洋黄鳍金枪鱼被过度捕捞,既存在捕捞型过度捕捞,也存在资源型过度捕捞,这与资源合成(Stock synthesis version 3,SS3)等模型的评价结果一致。展开更多
Catch per unit of eff ort(CPUE) data can display spatial autocorrelation. However, most of the CPUE standardization methods developed so far assumes independency of observations for the dependent variable, which is of...Catch per unit of eff ort(CPUE) data can display spatial autocorrelation. However, most of the CPUE standardization methods developed so far assumes independency of observations for the dependent variable, which is often invalid. In this study, we collected data of two fisheries, squid jigging fishery and mackerel trawl fishery. We used standard generalized linear model(GLM) and spatial GLMs to compare the impact of spatial autocorrelation on CPUE standardization for different fisheries. We found that spatialGLMs perform better than standard-GLM for both fisheries. The overestimation of precision of CPUE estimates was observed in both fisheries. Moran's I was used to quantify the level of autocorrelation for the two fisheries. The results show that autocorrelation in mackerel trawl fishery was much stronger than that in squid jigging fishery. According to the results of this paper, we highly recommend to account for spatial autocorrelation when using GLM to standardize CPUE data derived from commercial fisheries.展开更多
It is widely recognized that assessments of the status of data-poor fish stocks are challenging and that Bayesian analysis is one of the methods which can be used to improve the reliability of stock assessments in dat...It is widely recognized that assessments of the status of data-poor fish stocks are challenging and that Bayesian analysis is one of the methods which can be used to improve the reliability of stock assessments in data-poor situations through borrowing strength from prior information deduced from species with good-quality data or other known information. Because there is considerable uncertainty remaining in the stock assessment of albacore tuna(Thunnus alalunga) in the Indian Ocean due to the limited and low-quality data, we investigate the advantages of a Bayesian method in data-poor stock assessment by using Indian Ocean albacore stock assessment as an example. Eight Bayesian biomass dynamics models with different prior assumptions and catch data series were developed to assess the stock. The results show(1) the rationality of choice of catch data series and assumption of parameters could be enhanced by analyzing the posterior distribution of the parameters;(2) the reliability of the stock assessment could be improved by using demographic methods to construct a prior for the intrinsic rate of increase(r). Because we can make use of more information to improve the rationality of parameter estimation and the reliability of the stock assessment compared with traditional statistical methods by incorporating any available knowledge into the informative priors and analyzing the posterior distribution based on Bayesian framework in data-poor situations, we suggest that the Bayesian method should be an alternative method to be applied in data-poor species stock assessment, such as Indian Ocean albacore.展开更多
Fish biomass is a critical component of fishery stock assessment and management and it is often estimated from ocean primary production(OPP). However, the relationship between the biomass of a fish stock and OPP is ...Fish biomass is a critical component of fishery stock assessment and management and it is often estimated from ocean primary production(OPP). However, the relationship between the biomass of a fish stock and OPP is always complicated due to a variety of trophic controls in the ecosystem. In this paper, we examine the quantitative relationship between the biomass of chub mackerel(Scomber japonicus) and net primary production(NPP) in the southern East China Sea(SECS), using catch and effort data from the Chinese mainland large light-purse seine fishery logbook and NPP derived from remote sensing. We further discuss the mechanisms of trophic control in regulating this relationship. The results show a significant non-linear relationship exists between standardized CPUE(Catch-Per-Unit-Effort) and NPP(P〈0.05). This relationship can be described by a convex parabolic curve, where the biomass of chub mackerel increases with NPP to a maximum and then decreases when the NPP exceeds this point. The results imply that the ecosystem in the SECS is subject to complex trophic controls. We speculate that the change in abundance of key species at intermediate trophic levels and/or interspecific competition might contribute to this complex relationship.展开更多
The pelagic species is closely related to the marine environmental factors, and establishment of forecasting model of fishing ground with high accuracy is an important content for pelagic fishery. The chub mackerel(S...The pelagic species is closely related to the marine environmental factors, and establishment of forecasting model of fishing ground with high accuracy is an important content for pelagic fishery. The chub mackerel(Scomber japonicus) in the Yellow Sea and East China Sea is an important fishing target for Chinese lighting purse seine fishery. Based on the fishery data from China's mainland large-type lighting purse seine fishery for chub mackerel during the period of 2003 to 2010 and the environmental data including sea surface temperature(SST), gradient of the sea surface temperature(GSST), sea surface height(SSH) and geostrophic velocity(GV), we attempt to establish one new forecasting model of fishing ground based on boosted regression trees. In this study, the fishing areas with fishing effort is considered as one fishing ground, and the areas with no fishing ground are randomly selected from a background field, in which the fishing areas have no records in the logbooks. The performance of the forecasting model of fishing ground is evaluated with the testing data from the actual fishing data in 2011. The results show that the forecasting model of fishing ground has a high prediction performance, and the area under receiver operating curve(AUC) attains 0.897. The predicted fishing grounds are coincided with the actual fishing locations in 2011, and the movement route is also the same as the shift of fishing vessels, which indicates that this forecasting model based on the boosted regression trees can be used to effectively forecast the fishing ground of chub mackerel in the Yellow Sea and East China Sea.展开更多
An individual-based model of Scomber japonicus in the East China Sea(ECS)was developed to simulate the effects of physical environment on the transport and distribution of eggs,larvae and juveniles of S.japonicus from...An individual-based model of Scomber japonicus in the East China Sea(ECS)was developed to simulate the effects of physical environment on the transport and distribution of eggs,larvae and juveniles of S.japonicus from 1978 to 2013.The results showed that there were interannual differences in the transport and distribution of eggs,larvae and juveniles of S.japonicus in the ECS due to different physical environments from 1978 to 2013,and this difference was extremely obvious in some specific years.The current in the drift path of eggs and juveniles controlled and affected the transport process and distribution characteristics.In April,the distribution of eggs and larvae was mainly controlled by the Taiwan Warm Current(TWC).The number of eggs and larvae transported into the northeastern waters of the ECS was positively correlated with the intensity of TWC.In May,it was mainly regu-lated by the TWC and the Tsushima Strait Warm Current(TSWC).In June,the number of larvae and juveniles entering the Tsushima Strait and the Pacific Ocean was determined by the TSWC.In general,in the years with high number of larvae and juveniles into the Tsushima Strait,the catch of 0-year-old S.japonicus was also higher.In addition,the number of larvae and juveniles entering the Tsushima Strait in El Niño years was less than that in La Niña years.In July,the transport was mainly controlled by the Kuroshio Current(KC),and the eddy within the KC strongly affected its distribution.展开更多
文摘多个模型被用于印度洋长鳍金枪鱼(Thunnus alalunga)的资源评估,但这些模型的评估结果均存在较大的不确定性,为此,本文对影响印度洋长鳍金枪鱼资源评估的因素进行了分析。分析结果认为:(1)由于渔业数据存在不报、漏报或混报及采样样本数过低、采样协议出现变化等问题,造成印度洋长鳍金枪鱼渔业的渔获量、体长组成或年龄组成数据存在质量问题;(2)尽管对单位捕捞努力渔获量(catch per unit effort,CPUE)进行了标准化,但目标鱼种变化及捕捞努力量空间分布变化仍严重影响了标准化CPUE数据的质量;(3)印度洋长鳍金枪鱼的种群生态学及繁殖生物学研究仍比较薄弱,种群结构、繁殖、生长、自然死亡信息比较缺乏,在资源评估中,相关参数设置需借用其他洋区的研究结果;(4)海洋环境对印度洋长鳍金枪鱼的资源变动与空间分布具有显著影响,但评估模型较少考虑海洋环境的影响。由于上述问题的存在,导致当前评估结果存在较大不确定性。未来,应继续探索提高资源评估质量的方法,同时研究建立管理策略评价框架,以避免渔业资源评估结果的不确定性对该渔业可持续开发的影响。
文摘利用贝叶斯生物量动态模型对印度洋黄鳍金枪鱼(Thunnus albacares)资源进行了评估,并分析了不同标准化单位捕捞努力渔获量(catch per unit effort,CPUE)、内禀增长率(r)先验分布对评估结果的影响。结果表明:(1)模型能较好拟合日本延绳钓渔业的标准化CPUE,但对中国台湾延绳钓渔业的标准化CPUE拟合较差;当模型单独使用日本标准化CPUE时,评估结果显示印度洋黄鳍金枪鱼被过度捕捞;若模型单独使用中国台湾标准化CPUE,则结果相反,显示印度洋黄鳍金枪鱼未被过度捕捞;而当同时使用两个标准化CPUE时,日本标准化CPUE数据获得更大估计权重,因此,评估结果与单独使用日本标准化CPUE的结果类似。(2)当r采用无信息先验时,r估计偏小,而环境容纳量(K)估计则偏大,参数估计不合理;当r采用信息先验时,r与K的后验分布估计相对合理;由于r与K存在显著的负相关关系,生物量动态模型难于同时有效估计这两个参数,特别是在数据质量较差情况下,因而采用信息先验能提高生物量动态模型参数估计的质量。(3)本研究利用偏差信息准则(Deviance Information Criterion,DIC)与均方误差(Mean Square Error,MSE)统计量对模型进行了比较,并选择模型S8用于评价印度洋黄鳍金枪鱼的资源状态。评估结果认为印度洋黄鳍金枪鱼被过度捕捞,既存在捕捞型过度捕捞,也存在资源型过度捕捞,这与资源合成(Stock synthesis version 3,SS3)等模型的评价结果一致。
基金Supported by the National High Technology Research and Development Program of China(863 Program)(No.2012AA092303)the Public Science and Technology Research Funds Projects of Ocean(No.20155014)+2 种基金the Shanghai Leading Academic Discipline Projectthe Funding Program for Outstanding Dissertation in Shanghai Ocean UniversitySupported by SHOU International Center for Marine Studies and Shanghai 1000 Talent Program
文摘Catch per unit of eff ort(CPUE) data can display spatial autocorrelation. However, most of the CPUE standardization methods developed so far assumes independency of observations for the dependent variable, which is often invalid. In this study, we collected data of two fisheries, squid jigging fishery and mackerel trawl fishery. We used standard generalized linear model(GLM) and spatial GLMs to compare the impact of spatial autocorrelation on CPUE standardization for different fisheries. We found that spatialGLMs perform better than standard-GLM for both fisheries. The overestimation of precision of CPUE estimates was observed in both fisheries. Moran's I was used to quantify the level of autocorrelation for the two fisheries. The results show that autocorrelation in mackerel trawl fishery was much stronger than that in squid jigging fishery. According to the results of this paper, we highly recommend to account for spatial autocorrelation when using GLM to standardize CPUE data derived from commercial fisheries.
基金The Innovation Program of Shanghai Municipal Education Commission under contract No.14ZZ147the Opening Project of Key Laboratory of Sustainable Exploitation of Oceanic Fisheries Resources(Shanghai Ocean University),Ministry of Education under contract No.A1-0209-15-0503-1
文摘It is widely recognized that assessments of the status of data-poor fish stocks are challenging and that Bayesian analysis is one of the methods which can be used to improve the reliability of stock assessments in data-poor situations through borrowing strength from prior information deduced from species with good-quality data or other known information. Because there is considerable uncertainty remaining in the stock assessment of albacore tuna(Thunnus alalunga) in the Indian Ocean due to the limited and low-quality data, we investigate the advantages of a Bayesian method in data-poor stock assessment by using Indian Ocean albacore stock assessment as an example. Eight Bayesian biomass dynamics models with different prior assumptions and catch data series were developed to assess the stock. The results show(1) the rationality of choice of catch data series and assumption of parameters could be enhanced by analyzing the posterior distribution of the parameters;(2) the reliability of the stock assessment could be improved by using demographic methods to construct a prior for the intrinsic rate of increase(r). Because we can make use of more information to improve the rationality of parameter estimation and the reliability of the stock assessment compared with traditional statistical methods by incorporating any available knowledge into the informative priors and analyzing the posterior distribution based on Bayesian framework in data-poor situations, we suggest that the Bayesian method should be an alternative method to be applied in data-poor species stock assessment, such as Indian Ocean albacore.
基金The Industrialization Project of National Development and Reform Commission under contract No.2159999the Shanghai Universities First-class Disciplines Project(Fisheries)The National High-tech Industrialization Project of Remote Sensing System Development for High Resolution Ocean Satellite and Demonstration Application
文摘Fish biomass is a critical component of fishery stock assessment and management and it is often estimated from ocean primary production(OPP). However, the relationship between the biomass of a fish stock and OPP is always complicated due to a variety of trophic controls in the ecosystem. In this paper, we examine the quantitative relationship between the biomass of chub mackerel(Scomber japonicus) and net primary production(NPP) in the southern East China Sea(SECS), using catch and effort data from the Chinese mainland large light-purse seine fishery logbook and NPP derived from remote sensing. We further discuss the mechanisms of trophic control in regulating this relationship. The results show a significant non-linear relationship exists between standardized CPUE(Catch-Per-Unit-Effort) and NPP(P〈0.05). This relationship can be described by a convex parabolic curve, where the biomass of chub mackerel increases with NPP to a maximum and then decreases when the NPP exceeds this point. The results imply that the ecosystem in the SECS is subject to complex trophic controls. We speculate that the change in abundance of key species at intermediate trophic levels and/or interspecific competition might contribute to this complex relationship.
基金The National High Technology Research and Development Program(863 Program)of China under contract No.2012AA092301the Public Science and Technology Research Funds Projects of Ocean under contract No.20155014+1 种基金the National Key Technology Research and Development Program of China under contract No.2013BAD13B01the Innovation Program of Shanghai Municipal Education Commissionof China under contract No.14ZZ147
文摘The pelagic species is closely related to the marine environmental factors, and establishment of forecasting model of fishing ground with high accuracy is an important content for pelagic fishery. The chub mackerel(Scomber japonicus) in the Yellow Sea and East China Sea is an important fishing target for Chinese lighting purse seine fishery. Based on the fishery data from China's mainland large-type lighting purse seine fishery for chub mackerel during the period of 2003 to 2010 and the environmental data including sea surface temperature(SST), gradient of the sea surface temperature(GSST), sea surface height(SSH) and geostrophic velocity(GV), we attempt to establish one new forecasting model of fishing ground based on boosted regression trees. In this study, the fishing areas with fishing effort is considered as one fishing ground, and the areas with no fishing ground are randomly selected from a background field, in which the fishing areas have no records in the logbooks. The performance of the forecasting model of fishing ground is evaluated with the testing data from the actual fishing data in 2011. The results show that the forecasting model of fishing ground has a high prediction performance, and the area under receiver operating curve(AUC) attains 0.897. The predicted fishing grounds are coincided with the actual fishing locations in 2011, and the movement route is also the same as the shift of fishing vessels, which indicates that this forecasting model based on the boosted regression trees can be used to effectively forecast the fishing ground of chub mackerel in the Yellow Sea and East China Sea.
基金supported by the National Key R&D Program of China(No.2018YFD0900906)the National Natural Science Foundation of China(No.41906073)the Natural Science Foundation of Shanghai(No.19ZR1423000).
文摘An individual-based model of Scomber japonicus in the East China Sea(ECS)was developed to simulate the effects of physical environment on the transport and distribution of eggs,larvae and juveniles of S.japonicus from 1978 to 2013.The results showed that there were interannual differences in the transport and distribution of eggs,larvae and juveniles of S.japonicus in the ECS due to different physical environments from 1978 to 2013,and this difference was extremely obvious in some specific years.The current in the drift path of eggs and juveniles controlled and affected the transport process and distribution characteristics.In April,the distribution of eggs and larvae was mainly controlled by the Taiwan Warm Current(TWC).The number of eggs and larvae transported into the northeastern waters of the ECS was positively correlated with the intensity of TWC.In May,it was mainly regu-lated by the TWC and the Tsushima Strait Warm Current(TSWC).In June,the number of larvae and juveniles entering the Tsushima Strait and the Pacific Ocean was determined by the TSWC.In general,in the years with high number of larvae and juveniles into the Tsushima Strait,the catch of 0-year-old S.japonicus was also higher.In addition,the number of larvae and juveniles entering the Tsushima Strait in El Niño years was less than that in La Niña years.In July,the transport was mainly controlled by the Kuroshio Current(KC),and the eddy within the KC strongly affected its distribution.