Reproduction and immune defense are costly functions,and they are expected to tradeoff with each other to drive evolution.The brown planthopper(BPH),Nilaparvata lugens Stål(Hemiptera,Delphacidae),is a global supe...Reproduction and immune defense are costly functions,and they are expected to tradeoff with each other to drive evolution.The brown planthopper(BPH),Nilaparvata lugens Stål(Hemiptera,Delphacidae),is a global superpest that mostly damages rice crops.Yeast-like symbionts(YLS)exist in the abdominal fat body tissue and are tightly associated with the development,growth,and reproduction of BPH.Our previous research demonstrated that mating behavior promotes the release of YLS from the fat body into the hemolymph in the BPH,thereby triggering an immune response.Additionally,the fitness costs related to life-history traits of BPH(such as survival rate)have a strong dependence on the relative abundance of YLS.However,the possible relationship between reproduction and the immune response in BPH has not been identified.In this study,an omics-based approach was used to analyze the transcriptome of fat body tissues in mated and unmated BPH at 72 h post-eclosion,from which two antimicrobial peptide genes,NlDefensin A(NlDfA)and NlDefensin B(NlDfB),were selected since they were highly expressed in mated BPH.Subsequently,the full-length cDNA sequences of the NlDfA and NlDfB genes were cloned and analyzed.qPCR results showed up-regulation of the NlDfA and NlDfB genes in mated BPH when compared to unmated BPH.Spatial-temporal expression analysis indicated that the NlDfA and NlDfB genes were expressed in all tissues and developmental stages,and they were most highly expressed in the fat body at 24 h post-eclosion.Moreover,the symbionts in BPH were significantly inhibited by the in vitro expression of the NlDfA and NlDfB proteins.Furthermore,RNA interference(RNAi)-mediated suppression of NlDfA and NlDfB dramatically increased the relative abundance of YLS in the fat body,while YLS in the hemolymph decreased significantly.These BPHs also displayed some fitness disadvantages in survival,fecundity,hatchability,and possibly the vertical transmission of YLS from hemolymph to egg.Our results indicated that mating could heighten the immunity of BPH by upregulating the expression of the NlDfA and NlDfB genes,which protect the host from pathogen challenges during reproduction.However,the reduced content of YLS may act as a fitness disadvantage in dictating the life-history traits of BPH.This work has significant theoretical and practical implications for the precise green control technology that involves crucial gene targeting,as well as for the“endosymbionts for pest control”strategy in insects.展开更多
For data mining tasks on large-scale data,feature selection is a pivotal stage that plays an important role in removing redundant or irrelevant features while improving classifier performance.Traditional wrapper featu...For data mining tasks on large-scale data,feature selection is a pivotal stage that plays an important role in removing redundant or irrelevant features while improving classifier performance.Traditional wrapper feature selection methodologies typically require extensive model training and evaluation,which cannot deliver desired outcomes within a reasonable computing time.In this paper,an innovative wrapper approach termed Contribution Tracking Feature Selection(CTFS)is proposed for feature selection of large-scale data,which can locate informative features without population-level evolution.In other words,fewer evaluations are needed for CTFS compared to other evolutionary methods.We initially introduce a refined sparse autoencoder to assess the prominence of each feature in the subsequent wrapper method.Subsequently,we utilize an enhanced wrapper feature selection technique that merges Mutual Information(MI)with individual feature contributions.Finally,a fine-tuning contribution tracking mechanism discerns informative features within the optimal feature subset,operating via a dominance accumulation mechanism.Experimental results for multiple classification performance metrics demonstrate that the proposed method effectively yields smaller feature subsets without degrading classification performance in an acceptable runtime compared to state-of-the-art algorithms across most large-scale benchmark datasets.展开更多
Tilia amurensis is an economically valuable broadleaf tree species in Northeast China.The production of highqualityT.amurensis varieties at commercial scales has been greatly limited by the low germination rates.There...Tilia amurensis is an economically valuable broadleaf tree species in Northeast China.The production of highqualityT.amurensis varieties at commercial scales has been greatly limited by the low germination rates.Thereis thus a pressing need to develop an organogenesis protocol for in vitro propagation of T.amurensis to alleviate ashortage of high-quality T.amurensis seedlings.Here,we established a rapid in vitro propagation system forT.amurensis from mature zygotic embryos and analyzed the effects of plant growth regulators and culture mediain different stages.We found that Woody plant medium(WPM)was the optimal primary culture medium formature zygotic embryos.The highest callus induction percentage(68.76%)and number of axillary buds induced(3.2)were obtained in WPM+0.89μmol/L 6-benzyladenine(6-BA)+0.46μmol/L kinetin(KT)+0.25μmol/Lindole-3-butryic acid(IBA)+1.44μmol/L gibberellin A_(3)(GA_(3)).The multiple shoot bud development achievedthe highest percentage(83.32%)in the Murashige and Skoog(MS)+2.22μmol/L 6-BA+0.25μmol/L IBA+1.44μmol/L GA_(3).The rooting percentage(96.70%)was highest in 1/2 MS medium+1.48μmol/L IBA.Thesurvival percentage of transplanting plantlets was 82.22%in soil:vermiculite:perlite(5:3:1).Our study is the firstto establish an effective organogenesis protocol for T.amurensis using mature zygotic embryos.展开更多
In order to overcome the problem that the leaf yellowing stage in tobacco curing reduces the fragrance of the product, this study introduced the principle and key parameters of a three-stage six-step curing technology...In order to overcome the problem that the leaf yellowing stage in tobacco curing reduces the fragrance of the product, this study introduced the principle and key parameters of a three-stage six-step curing technology. The field trail was conducted in Wulong county of Chongqing city in 2010, and Virginia K326 was the tested cultivar. The middle leaves were harvested and plaited after maturity, and then cured with the three-stage six-step curing technology and traditional three-stage curing technology, respectively. Three replicates were established for each of the two curing technologies. Then, chemical constituents, aromatic substances and smoking quality were analyzed. The results show that compared with the traditional three-stage curing technology, the three-stage six-step curing technology produces more suitable ratios of chemical constituents, higher aromatic component content and higher smoking quality grade of tobacco leaves. Therefore, the continuous improvement of corollary equipment and matching technologies is expected to widen the applications of the three-stage six-step curing technology in tobacco and provide a strong technical support for the development of the tobacco industry.展开更多
高致病性猪繁殖与呼吸综合征病毒(Highly pathogenic porcine reproductive and respiratory syndrome virus,HP-PRRSV),是由PRRSV在NSP2基因(Nonstructural protein 2)上缺失90个核苷酸形成的突变株,能够引起不同生长阶段猪高热、高发...高致病性猪繁殖与呼吸综合征病毒(Highly pathogenic porcine reproductive and respiratory syndrome virus,HP-PRRSV),是由PRRSV在NSP2基因(Nonstructural protein 2)上缺失90个核苷酸形成的突变株,能够引起不同生长阶段猪高热、高发病率和高死亡率,给我国养猪业造成巨大经济损失[1,4,5,6]。猪圆环病毒2型(Porcine circovirus type 2,PCV2)是引起断奶仔猪多系统衰竭综合征(Postweaning multisystemic wasting syndrome,PMWS)的主要病原。近年来,国内外有关PRRSV与PCV2共感染报告较多,引起广泛关注。展开更多
Growing evidences indicate that dysfunction of autophagy contributes to the disease pathogenesis of amyotrophic lateral sclerosis(ALS)and frontotemporal dementia(FTD),two neurodegenerative disorders.The GGGGCC·GG...Growing evidences indicate that dysfunction of autophagy contributes to the disease pathogenesis of amyotrophic lateral sclerosis(ALS)and frontotemporal dementia(FTD),two neurodegenerative disorders.The GGGGCC·GGCCCC repeat RNA expansion in chromosome 9 open reading frame 72(C9orf72)is the most genetic cause of both ALS and FTD.According to the previous studies,GGGGCC·GGCCCC repeat undergoes the unconventional repeat-associated non-ATG translation,which produces dipeptide repeat(DPR)proteins.Although there is a growing understanding that C9orf72 DPRs have a strong ability to harm neurons and induce C9orf72-linked ALS/FTD,whether these DPRs can affect autophagy remains unclear.In the present study,we find that poly-GR and poly-PR,two arginine-containing DPRs which display the most cytotoxic properties according to the previous studies,strongly inhibit starvation-induced autophagy.Moreover,our data indicate that arginine-rich DPRs enhance the interaction between BCL2 and BECN1/Beclin 1 by inhibiting BCL2 phosphorylation,therefore they can impair autophagic clearance of neurodegenerative disease-associated protein aggregates under starvation condition in cells.Importantly,our study not only highlights the role of C9orf72 DPR in autophagy dysfunction,but also provides novel insight that pharmacological intervention of autophagy using SW063058,a small molecule compound that can disrupt the interaction between BECN1 and BCL2,may reduce C9orf72 DPR-induced neurotoxicity.展开更多
The distributed permutation flow shop scheduling problem(DPFSP)has received increasing attention in recent years.The iterated greedy algorithm(IGA)serves as a powerful optimizer for addressing such a problem because o...The distributed permutation flow shop scheduling problem(DPFSP)has received increasing attention in recent years.The iterated greedy algorithm(IGA)serves as a powerful optimizer for addressing such a problem because of its straightforward,single-solution evolution framework.However,a potential draw-back of IGA is the lack of utilization of historical information,which could lead to an imbalance between exploration and exploitation,especially in large-scale DPFSPs.As a consequence,this paper develops an IGA with memory and learning mechanisms(MLIGA)to efficiently solve the DPFSP targeted at the mini-malmakespan.InMLIGA,we incorporate a memory mechanism to make a more informed selection of the initial solution at each stage of the search,by extending,reconstructing,and reinforcing the information from previous solutions.In addition,we design a twolayer cooperative reinforcement learning approach to intelligently determine the key parameters of IGA and the operations of the memory mechanism.Meanwhile,to ensure that the experience generated by each perturbation operator is fully learned and to reduce the prior parameters of MLIGA,a probability curve-based acceptance criterion is proposed by combining a cube root function with custom rules.At last,a discrete adaptive learning rate is employed to enhance the stability of the memory and learningmechanisms.Complete ablation experiments are utilized to verify the effectiveness of the memory mechanism,and the results show that this mechanism is capable of improving the performance of IGA to a large extent.Furthermore,through comparative experiments involving MLIGA and five state-of-the-art algorithms on 720 benchmarks,we have discovered that MLI-GA demonstrates significant potential for solving large-scale DPFSPs.This indicates that MLIGA is well-suited for real-world distributed flow shop scheduling.展开更多
SiCp/Al composites have excellent comprehensive properties and have been widely used in aerospace,automotive industry and other fields.Due to the huge difference in performance between SiC particles and matrix alloys,...SiCp/Al composites have excellent comprehensive properties and have been widely used in aerospace,automotive industry and other fields.Due to the huge difference in performance between SiC particles and matrix alloys,traditional fusion welding methods are difficult to meet the join requirements of SiCp/Al composites.Friction stir joining(friction stir welding),as a solid phase joining process,has been proved to be a new technology with fine prospect in joining SiCp/Al composites compared with fusion welding process.Although some progress has been made in recent years,there are still full of challenges.In this paper,the research status of friction stir joining of SiCp/Al composites in recent years is expatiated,including the weldability of SiCp/Al composites,the macrostructure and the microstructure of joints,mechanical properties of joints,and tool wear and monitoring.Furthermore,the existing challenges of friction stir joining of SiCp/Al composites are summarized and the future development directions are prospected.展开更多
As sessile organisms,plants perceive,respond,and adapt to the environmental changes for optimal growth and survival.The plant growth and fitness are enhanced by circadian clocks through coordination of numerous biolog...As sessile organisms,plants perceive,respond,and adapt to the environmental changes for optimal growth and survival.The plant growth and fitness are enhanced by circadian clocks through coordination of numerous biological events.In legume species,nitrogen-fixing root nodules were developed as the plant organs specialized for symbiotic transfer of ni-trogen between microsymbiont and host.Here,we report that the endogenous circadian rhythm in nodules is regulated by MtLHY in legume species Medicago truncatula.Loss of function of MtLHY leads to a reduction in the number of nodules formed,resulting in a diminished ability to assimilate nitrogen.The operation of the 24-h rhythm in shoot is further influenced by the availability of nitrogen produced by the nodules,leading to the irregulated nyctinastic leaf movement and reduced biomass in mtlhy mutants.These data shed new light on the roles of MtLHY in the orchestration of circadian oscillator in nodules and shoots,which provides a mechanistic link between nodulation,nitrogen assimilation,and clock function.展开更多
Substantial diversity exists for both the size andshape of the leaf,the main photosynthetic organofflowering plants.The two major forms of leaf aresimple leaves,in which the leaf blade is undivided,and compound leaves...Substantial diversity exists for both the size andshape of the leaf,the main photosynthetic organofflowering plants.The two major forms of leaf aresimple leaves,in which the leaf blade is undivided,and compound leaves,which comprise severalleaflets.Leaves form at the shoot apical meristemfrom a group of undifferentiated cells,whichfirstestablish polarity,then grow and differentiate.Each of these processes is controlled by a com-bination of transcriptional regulators,microRNAsand phytohormones.The present review docu-ments recent advances in our understanding ofhow these various factors modulate the develop-ment of both simple leaves(focusing mainly on themodel plantArabidopsis thaliana)and compoundleaves(focusing mainly on the model legumespeciesMedicago truncatula).展开更多
The Commensal Radio Astronomy Five-hundred-meter Aperture Spherical radio Telescope(FAST) Survey(CRAFTS) utilizes the novel drift-scan commensal survey mode of FAST and can generate billions of pulsar candidate signal...The Commensal Radio Astronomy Five-hundred-meter Aperture Spherical radio Telescope(FAST) Survey(CRAFTS) utilizes the novel drift-scan commensal survey mode of FAST and can generate billions of pulsar candidate signals. The human experts are not likely to thoroughly examine these signals, and various machine sorting methods are used to aid the classification of the FAST candidates. In this study, we propose a new ensemble classification system for pulsar candidates. This system denotes the further development of the pulsar image-based classification system(PICS), which was used in the Arecibo Telescope pulsar survey, and has been retrained and customized for the FAST drift-scan survey. In this study, we designed a residual network model comprising 15 layers to replace the convolutional neural networks(CNNs) in PICS. The results of this study demonstrate that the new model can sort >96% of real pulsars to belong the top 1% of all candidates and classify >1.6 million candidates per day using a dual-GPU and 24-core computer. This increased speed and efficiency can help to facilitate real-time or quasi-real-time processing of the pulsar-search data stream obtained from CRAFTS. In addition, we have published the labeled FAST data used in this study online, which can aid in the development of new deep learning techniques for performing pulsar searches.展开更多
Autophagy is a major degradation system which processes substrates through the steps of auto- phagosome formation, autophagosome-lysosome fusion, and substrate degradation. Aberrant autophagic flux is present in many ...Autophagy is a major degradation system which processes substrates through the steps of auto- phagosome formation, autophagosome-lysosome fusion, and substrate degradation. Aberrant autophagic flux is present in many pathological conditions including neurodegeneration and tumors. CHIP/STUB1, an E3 ligase, plays an important role in neurodegeneration. In this study, we identified the regulation of autophagic flux by CHIP (carboxy-terminus of HscT0-interacting protein). Knockdown of CHIP induced autophagosome formation through increasing the PTEN protein level and decreasing the AKT/mTOR activity as well as decreasing phosphorylation of ULK1 on Ser757. However, degradation of the autophagic substrate p62 was disturbed by knockdown of CHIP, suggesting an abnormality of autophagic flux. Furthermore, knockdown of CHIP increased the susceptibility of cells to autophagic cell death induced by bafilomycin AI. Thus, our data suggest that CHIP plays roles in the regulation of autophagic flux.展开更多
Building an effective resilient supply chain system (RSCS) is critical and necessary to reduce the risk of supply chain disruptions in unexpected scenarios such as COVID-19 pandemic and trade wars. To overcome the imp...Building an effective resilient supply chain system (RSCS) is critical and necessary to reduce the risk of supply chain disruptions in unexpected scenarios such as COVID-19 pandemic and trade wars. To overcome the impact of insufficient raw material supply on the supply chain in mass disruption scenarios, this study proposes a novel RSCS considering product design changes (PDC). An RSCS domain model is first developed from the perspective of PDC based on a general conceptual framework, i.e., function-context-behavior-principle-state-structure (FCBPSS), which can portray complex systems under unpredictable situations. Specifically, the interaction among the structure, state and behavior of the infrastructure system and substance system is captured, and then a quantitative analysis of the change impact process is presented to evaluate the resilience of both the product and supply chain. Next, a case study is conducted to demonstrate the PDC strategy and to validate the feasibility and effectiveness of the RSCS domain model. The results show that the restructured RSCS based on the proposed strategy and model can remedy the huge losses caused by the unavailability of raw materials.展开更多
Gefitinib,a well-known epidermal growth factor receptor(EGFR)tyrosine kinase inhibitor for the targeted therapy of lung cancer,induces autophagy in association with drug resistance.However,it remains unclear whether g...Gefitinib,a well-known epidermal growth factor receptor(EGFR)tyrosine kinase inhibitor for the targeted therapy of lung cancer,induces autophagy in association with drug resistance.However,it remains unclear whether gefitinib treatment can affect the selective form of autophagy(i.e.,mitophagy)and be beneficial for the treatment of human diseases with decreased autophagy,such as neurodegenerative diseases.Here,we show that gefitinib treatment promotes PINK1/Parkin-mediated mitophagy in both nonneuronal and neuronal cells,and this effect is independent of EGFR.Moreover,we found that gefitinib treatment increases the recruitment of the autophagy receptor optineurin(OPTN)to damaged mitochondria,which is a downstream signaling event in PINK1/Parkin-mediated mitophagy.In addition,gefitinib treatment significantly alleviated neuronal damage in TBK1-deficient neurons,resulting in impeded mitophagy.In conclusion,our study suggests that gefitinib promotes PINK1/Parkin-mediated mitophagy via OPTN and may be beneficial for the treatment of neurodegenerative diseases that are associated with defective mitophagy.展开更多
基金supported by the National Natural Science Foundation of China(U21A20223 and 32302354)the Zhejiang Provincial Programs for Science and Technology Development,China(2022C02047).
文摘Reproduction and immune defense are costly functions,and they are expected to tradeoff with each other to drive evolution.The brown planthopper(BPH),Nilaparvata lugens Stål(Hemiptera,Delphacidae),is a global superpest that mostly damages rice crops.Yeast-like symbionts(YLS)exist in the abdominal fat body tissue and are tightly associated with the development,growth,and reproduction of BPH.Our previous research demonstrated that mating behavior promotes the release of YLS from the fat body into the hemolymph in the BPH,thereby triggering an immune response.Additionally,the fitness costs related to life-history traits of BPH(such as survival rate)have a strong dependence on the relative abundance of YLS.However,the possible relationship between reproduction and the immune response in BPH has not been identified.In this study,an omics-based approach was used to analyze the transcriptome of fat body tissues in mated and unmated BPH at 72 h post-eclosion,from which two antimicrobial peptide genes,NlDefensin A(NlDfA)and NlDefensin B(NlDfB),were selected since they were highly expressed in mated BPH.Subsequently,the full-length cDNA sequences of the NlDfA and NlDfB genes were cloned and analyzed.qPCR results showed up-regulation of the NlDfA and NlDfB genes in mated BPH when compared to unmated BPH.Spatial-temporal expression analysis indicated that the NlDfA and NlDfB genes were expressed in all tissues and developmental stages,and they were most highly expressed in the fat body at 24 h post-eclosion.Moreover,the symbionts in BPH were significantly inhibited by the in vitro expression of the NlDfA and NlDfB proteins.Furthermore,RNA interference(RNAi)-mediated suppression of NlDfA and NlDfB dramatically increased the relative abundance of YLS in the fat body,while YLS in the hemolymph decreased significantly.These BPHs also displayed some fitness disadvantages in survival,fecundity,hatchability,and possibly the vertical transmission of YLS from hemolymph to egg.Our results indicated that mating could heighten the immunity of BPH by upregulating the expression of the NlDfA and NlDfB genes,which protect the host from pathogen challenges during reproduction.However,the reduced content of YLS may act as a fitness disadvantage in dictating the life-history traits of BPH.This work has significant theoretical and practical implications for the precise green control technology that involves crucial gene targeting,as well as for the“endosymbionts for pest control”strategy in insects.
基金supported in part by the National Key Research and Development Program of China under Grant(No.2021YFB3300900)the NSFC Key Supported Project of the Major Research Plan under Grant(No.92267206)+2 种基金the National Natural Science Foundation of China under Grant(Nos.72201052,62032013,62173076)the Fundamental Research Funds for the Central Universities under Grant(No.N2204017)the Fundamental Research Funds for State Key Laboratory of Synthetical Automation for Process Industries under Grant(No.2013ZCX11).
文摘For data mining tasks on large-scale data,feature selection is a pivotal stage that plays an important role in removing redundant or irrelevant features while improving classifier performance.Traditional wrapper feature selection methodologies typically require extensive model training and evaluation,which cannot deliver desired outcomes within a reasonable computing time.In this paper,an innovative wrapper approach termed Contribution Tracking Feature Selection(CTFS)is proposed for feature selection of large-scale data,which can locate informative features without population-level evolution.In other words,fewer evaluations are needed for CTFS compared to other evolutionary methods.We initially introduce a refined sparse autoencoder to assess the prominence of each feature in the subsequent wrapper method.Subsequently,we utilize an enhanced wrapper feature selection technique that merges Mutual Information(MI)with individual feature contributions.Finally,a fine-tuning contribution tracking mechanism discerns informative features within the optimal feature subset,operating via a dominance accumulation mechanism.Experimental results for multiple classification performance metrics demonstrate that the proposed method effectively yields smaller feature subsets without degrading classification performance in an acceptable runtime compared to state-of-the-art algorithms across most large-scale benchmark datasets.
基金This work was supported by the Science and Technology Development Plan Project of Jilin Province,China(20200402115NC).
文摘Tilia amurensis is an economically valuable broadleaf tree species in Northeast China.The production of highqualityT.amurensis varieties at commercial scales has been greatly limited by the low germination rates.Thereis thus a pressing need to develop an organogenesis protocol for in vitro propagation of T.amurensis to alleviate ashortage of high-quality T.amurensis seedlings.Here,we established a rapid in vitro propagation system forT.amurensis from mature zygotic embryos and analyzed the effects of plant growth regulators and culture mediain different stages.We found that Woody plant medium(WPM)was the optimal primary culture medium formature zygotic embryos.The highest callus induction percentage(68.76%)and number of axillary buds induced(3.2)were obtained in WPM+0.89μmol/L 6-benzyladenine(6-BA)+0.46μmol/L kinetin(KT)+0.25μmol/Lindole-3-butryic acid(IBA)+1.44μmol/L gibberellin A_(3)(GA_(3)).The multiple shoot bud development achievedthe highest percentage(83.32%)in the Murashige and Skoog(MS)+2.22μmol/L 6-BA+0.25μmol/L IBA+1.44μmol/L GA_(3).The rooting percentage(96.70%)was highest in 1/2 MS medium+1.48μmol/L IBA.Thesurvival percentage of transplanting plantlets was 82.22%in soil:vermiculite:perlite(5:3:1).Our study is the firstto establish an effective organogenesis protocol for T.amurensis using mature zygotic embryos.
文摘In order to overcome the problem that the leaf yellowing stage in tobacco curing reduces the fragrance of the product, this study introduced the principle and key parameters of a three-stage six-step curing technology. The field trail was conducted in Wulong county of Chongqing city in 2010, and Virginia K326 was the tested cultivar. The middle leaves were harvested and plaited after maturity, and then cured with the three-stage six-step curing technology and traditional three-stage curing technology, respectively. Three replicates were established for each of the two curing technologies. Then, chemical constituents, aromatic substances and smoking quality were analyzed. The results show that compared with the traditional three-stage curing technology, the three-stage six-step curing technology produces more suitable ratios of chemical constituents, higher aromatic component content and higher smoking quality grade of tobacco leaves. Therefore, the continuous improvement of corollary equipment and matching technologies is expected to widen the applications of the three-stage six-step curing technology in tobacco and provide a strong technical support for the development of the tobacco industry.
基金This work was supported by the National Natural Science Foundation of China(Nos.82022022,32371018 and 82071274)a Project Funded by Jiangsu Key Laboratory of Neuropsychiatric Diseases(BM2013003,China)+4 种基金a Key Project of Natural Science Foundation of Jiangsu Provincial Higher Education Institutions(23KJA310005,China)a Project Funded by the Interdisciplinary Basic Frontier Innovation Program of Suzhou Medical College of Soochow University(MP13202823,China)a Project Funded by the Suzhou International Joint Laboratory for Diagnosis and Treatment of Brain Diseases,and a Project Funded by the Priority Academic Program Development of the Jiangsu Higher Education Institutes(PAPD).J.H.M.P.was supported Science Foundation Ireland(17/COEN/3474,17/JPND/3455)Q.M.is a recipient of an RCSI International StAR Ph.D.scholarship.N.L.was supported by the Postgraduate Research&Practice Innovation Program of Jiangsu Province.K.Y.T.,was supported by the financial support from the Science and Technology Development Fund,Macao SAR(File no.0062/2021/A,China)University of Macao(File no.MYRG2022-00171-FHS,China).
文摘Growing evidences indicate that dysfunction of autophagy contributes to the disease pathogenesis of amyotrophic lateral sclerosis(ALS)and frontotemporal dementia(FTD),two neurodegenerative disorders.The GGGGCC·GGCCCC repeat RNA expansion in chromosome 9 open reading frame 72(C9orf72)is the most genetic cause of both ALS and FTD.According to the previous studies,GGGGCC·GGCCCC repeat undergoes the unconventional repeat-associated non-ATG translation,which produces dipeptide repeat(DPR)proteins.Although there is a growing understanding that C9orf72 DPRs have a strong ability to harm neurons and induce C9orf72-linked ALS/FTD,whether these DPRs can affect autophagy remains unclear.In the present study,we find that poly-GR and poly-PR,two arginine-containing DPRs which display the most cytotoxic properties according to the previous studies,strongly inhibit starvation-induced autophagy.Moreover,our data indicate that arginine-rich DPRs enhance the interaction between BCL2 and BECN1/Beclin 1 by inhibiting BCL2 phosphorylation,therefore they can impair autophagic clearance of neurodegenerative disease-associated protein aggregates under starvation condition in cells.Importantly,our study not only highlights the role of C9orf72 DPR in autophagy dysfunction,but also provides novel insight that pharmacological intervention of autophagy using SW063058,a small molecule compound that can disrupt the interaction between BECN1 and BCL2,may reduce C9orf72 DPR-induced neurotoxicity.
基金supported in part by the National Key Research and Development Program of China under Grant No.2021YFF0901300in part by the National Natural Science Foundation of China under Grant Nos.62173076 and 72271048.
文摘The distributed permutation flow shop scheduling problem(DPFSP)has received increasing attention in recent years.The iterated greedy algorithm(IGA)serves as a powerful optimizer for addressing such a problem because of its straightforward,single-solution evolution framework.However,a potential draw-back of IGA is the lack of utilization of historical information,which could lead to an imbalance between exploration and exploitation,especially in large-scale DPFSPs.As a consequence,this paper develops an IGA with memory and learning mechanisms(MLIGA)to efficiently solve the DPFSP targeted at the mini-malmakespan.InMLIGA,we incorporate a memory mechanism to make a more informed selection of the initial solution at each stage of the search,by extending,reconstructing,and reinforcing the information from previous solutions.In addition,we design a twolayer cooperative reinforcement learning approach to intelligently determine the key parameters of IGA and the operations of the memory mechanism.Meanwhile,to ensure that the experience generated by each perturbation operator is fully learned and to reduce the prior parameters of MLIGA,a probability curve-based acceptance criterion is proposed by combining a cube root function with custom rules.At last,a discrete adaptive learning rate is employed to enhance the stability of the memory and learningmechanisms.Complete ablation experiments are utilized to verify the effectiveness of the memory mechanism,and the results show that this mechanism is capable of improving the performance of IGA to a large extent.Furthermore,through comparative experiments involving MLIGA and five state-of-the-art algorithms on 720 benchmarks,we have discovered that MLI-GA demonstrates significant potential for solving large-scale DPFSPs.This indicates that MLIGA is well-suited for real-world distributed flow shop scheduling.
基金supported by the National Natural Science Foundation of China(No.51675270)the Postgraduate Research&Practice Innovation Program of Jiangsu Province(No.KYCX17_0241)the China Postdoctoral Science Foundation(No.2016M600411)。
文摘SiCp/Al composites have excellent comprehensive properties and have been widely used in aerospace,automotive industry and other fields.Due to the huge difference in performance between SiC particles and matrix alloys,traditional fusion welding methods are difficult to meet the join requirements of SiCp/Al composites.Friction stir joining(friction stir welding),as a solid phase joining process,has been proved to be a new technology with fine prospect in joining SiCp/Al composites compared with fusion welding process.Although some progress has been made in recent years,there are still full of challenges.In this paper,the research status of friction stir joining of SiCp/Al composites in recent years is expatiated,including the weldability of SiCp/Al composites,the macrostructure and the microstructure of joints,mechanical properties of joints,and tool wear and monitoring.Furthermore,the existing challenges of friction stir joining of SiCp/Al composites are summarized and the future development directions are prospected.
基金This workwas supported by grants from Ministry of Science and Technology of China(2016YFDO100500 and 2015CB943500)the National Natural Science Founda-tion of China(31671507 and U1906201)+1 种基金Shandong Province(ZR2018ZC0334 and ZR2019MC013),Project for innovation and entrepreneurship leader of Qingdao(19-3-2-3-zhc)Development of M.truncatula Tnt1 mutant population was,in part,funded by the National Science Foundation,USA(DB1-0703285 and 1OS-1127155).
文摘As sessile organisms,plants perceive,respond,and adapt to the environmental changes for optimal growth and survival.The plant growth and fitness are enhanced by circadian clocks through coordination of numerous biological events.In legume species,nitrogen-fixing root nodules were developed as the plant organs specialized for symbiotic transfer of ni-trogen between microsymbiont and host.Here,we report that the endogenous circadian rhythm in nodules is regulated by MtLHY in legume species Medicago truncatula.Loss of function of MtLHY leads to a reduction in the number of nodules formed,resulting in a diminished ability to assimilate nitrogen.The operation of the 24-h rhythm in shoot is further influenced by the availability of nitrogen produced by the nodules,leading to the irregulated nyctinastic leaf movement and reduced biomass in mtlhy mutants.These data shed new light on the roles of MtLHY in the orchestration of circadian oscillator in nodules and shoots,which provides a mechanistic link between nodulation,nitrogen assimilation,and clock function.
基金supported by grants from the National Natural Science Foundation of China (31871459 and 31671507)Shandong Province (ZR2020KC018 and ZR2019MC013)+2 种基金China Postdoctoral Science Foundation (2019M662836)Project for Scientific Research Innovation Team of Young Scholar in Colleges and Universities of Shandong Province (2019KJE008)Project for innovation and entrepreneurship leader of Qingdao (19-3-2-3-zhc)
文摘Substantial diversity exists for both the size andshape of the leaf,the main photosynthetic organofflowering plants.The two major forms of leaf aresimple leaves,in which the leaf blade is undivided,and compound leaves,which comprise severalleaflets.Leaves form at the shoot apical meristemfrom a group of undifferentiated cells,whichfirstestablish polarity,then grow and differentiate.Each of these processes is controlled by a com-bination of transcriptional regulators,microRNAsand phytohormones.The present review docu-ments recent advances in our understanding ofhow these various factors modulate the develop-ment of both simple leaves(focusing mainly on themodel plantArabidopsis thaliana)and compoundleaves(focusing mainly on the model legumespeciesMedicago truncatula).
基金supported by the National Key Research and Development Program of China(Grant No.2017YFA0402600)the Natural Science Foundation of Shandong(Grant No.ZR2015FL006)+4 种基金the CAS International Partnership Program(Grant No.114A11KYSB20160008)the Strategic Priority Research Program of the Chinese Academy of Sciences(Grant No.XDB23000000)the Chinese Academy of Sciences Pioneer Hundred Talents Programthe National Natural Science Foundation of China(Grant Nos.61472043,11743002,11873067,11690024,and 11725313)the Joint Research Fund in Astronomy(Grant No.U1531242)under Cooperative Agreement between the NSFC and CAS and National Natural Science Foundation of China(Grant No.11673005)
文摘The Commensal Radio Astronomy Five-hundred-meter Aperture Spherical radio Telescope(FAST) Survey(CRAFTS) utilizes the novel drift-scan commensal survey mode of FAST and can generate billions of pulsar candidate signals. The human experts are not likely to thoroughly examine these signals, and various machine sorting methods are used to aid the classification of the FAST candidates. In this study, we propose a new ensemble classification system for pulsar candidates. This system denotes the further development of the pulsar image-based classification system(PICS), which was used in the Arecibo Telescope pulsar survey, and has been retrained and customized for the FAST drift-scan survey. In this study, we designed a residual network model comprising 15 layers to replace the convolutional neural networks(CNNs) in PICS. The results of this study demonstrate that the new model can sort >96% of real pulsars to belong the top 1% of all candidates and classify >1.6 million candidates per day using a dual-GPU and 24-core computer. This increased speed and efficiency can help to facilitate real-time or quasi-real-time processing of the pulsar-search data stream obtained from CRAFTS. In addition, we have published the labeled FAST data used in this study online, which can aid in the development of new deep learning techniques for performing pulsar searches.
基金supported in part by the National Natural Science Foundation of China (31330030 and 31471012)the National Basic Research Development Program of China (2012CB947602)a Project Funded by the Priority Academic Program Development of Jiangsu Higher Education Institutions
文摘Autophagy is a major degradation system which processes substrates through the steps of auto- phagosome formation, autophagosome-lysosome fusion, and substrate degradation. Aberrant autophagic flux is present in many pathological conditions including neurodegeneration and tumors. CHIP/STUB1, an E3 ligase, plays an important role in neurodegeneration. In this study, we identified the regulation of autophagic flux by CHIP (carboxy-terminus of HscT0-interacting protein). Knockdown of CHIP induced autophagosome formation through increasing the PTEN protein level and decreasing the AKT/mTOR activity as well as decreasing phosphorylation of ULK1 on Ser757. However, degradation of the autophagic substrate p62 was disturbed by knockdown of CHIP, suggesting an abnormality of autophagic flux. Furthermore, knockdown of CHIP increased the susceptibility of cells to autophagic cell death induced by bafilomycin AI. Thus, our data suggest that CHIP plays roles in the regulation of autophagic flux.
基金supported in part by the National Key Research and Development Program of China(Grant No.2020YFB1708200)the National Natural Science Foundation of China(Grant Nos.62173076and 71971027).
文摘Building an effective resilient supply chain system (RSCS) is critical and necessary to reduce the risk of supply chain disruptions in unexpected scenarios such as COVID-19 pandemic and trade wars. To overcome the impact of insufficient raw material supply on the supply chain in mass disruption scenarios, this study proposes a novel RSCS considering product design changes (PDC). An RSCS domain model is first developed from the perspective of PDC based on a general conceptual framework, i.e., function-context-behavior-principle-state-structure (FCBPSS), which can portray complex systems under unpredictable situations. Specifically, the interaction among the structure, state and behavior of the infrastructure system and substance system is captured, and then a quantitative analysis of the change impact process is presented to evaluate the resilience of both the product and supply chain. Next, a case study is conducted to demonstrate the PDC strategy and to validate the feasibility and effectiveness of the RSCS domain model. The results show that the restructured RSCS based on the proposed strategy and model can remedy the huge losses caused by the unavailability of raw materials.
基金supported by the National Natural Science Foundation of China(Grant Nos.82022022,31771117,and 82071274)a Project Funded by the Suzhou Science and Technology Program(Grant No.SYS2019068)+2 种基金a Project Funded by the Clinical Research Program of the WuJieping Medical Foundation(Grant No.320.6750.19092-32)a Project Funded by Jiangsu Key Laboratory of Neuropsychiatric Diseases(Grant No.BM2013003)a Project Funded by the Priority Academic Program Development of the Jiangsu Higher Education Institutes(PAPD).
文摘Gefitinib,a well-known epidermal growth factor receptor(EGFR)tyrosine kinase inhibitor for the targeted therapy of lung cancer,induces autophagy in association with drug resistance.However,it remains unclear whether gefitinib treatment can affect the selective form of autophagy(i.e.,mitophagy)and be beneficial for the treatment of human diseases with decreased autophagy,such as neurodegenerative diseases.Here,we show that gefitinib treatment promotes PINK1/Parkin-mediated mitophagy in both nonneuronal and neuronal cells,and this effect is independent of EGFR.Moreover,we found that gefitinib treatment increases the recruitment of the autophagy receptor optineurin(OPTN)to damaged mitochondria,which is a downstream signaling event in PINK1/Parkin-mediated mitophagy.In addition,gefitinib treatment significantly alleviated neuronal damage in TBK1-deficient neurons,resulting in impeded mitophagy.In conclusion,our study suggests that gefitinib promotes PINK1/Parkin-mediated mitophagy via OPTN and may be beneficial for the treatment of neurodegenerative diseases that are associated with defective mitophagy.