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Multi-omics Approach Reveals Influenza-A Virus Target Genes Associated Genomic,Clinical and Immunological Characteristics in Cancers
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作者 jiaojiao wang Yong Liao +7 位作者 Pinglian Yang Weile Ye Yong Liu Chunxia Xiao Weixiong Liao Chunbo Chen Zhiping Liu Zunnan Huang 《Biomedical and Environmental Sciences》 SCIE CAS CSCD 2024年第7期698-715,共18页
Objective To examine the precise function of influenza A virus target genes(IATGs)in malignancy.Methods Using multi-omics data from the TCGA and TCPA datasets,33 tumor types were evaluated for IATGs.IATG expression in... Objective To examine the precise function of influenza A virus target genes(IATGs)in malignancy.Methods Using multi-omics data from the TCGA and TCPA datasets,33 tumor types were evaluated for IATGs.IATG expression in cancer cells was analyzed using transcriptome analysis.Copy number variation(CNV)was assessed using GISTICS 2.0.Spearman’s analysis was used to correlate mRNA expression with methylation levels.GSEA was used for the enrichment analysis.Pearson’s correlation analysis was used to examine the association between IATG mRNA expression and IC50.The ImmuCellAI algorithm was used to calculate the infiltration scores of 24 immune cell types.Results In 13 solid tumors,IATG mRNA levels were atypically expressed.Except for UCS,UVM,KICH,PCPG,THCA,CHOL,LAMI,and MESO,most cancers contained somatic IATG mutations.The main types of CNVs in IATGs are heterozygous amplifications and deletions.In most tumors,IATG mRNA expression is adversely associated with methylation.RT-PCR demonstrated that EGFR,ANXA5,CACNA1C,CD209,UVRAG were upregulated and CLEC4M was downregulated in KIRC cell lines,consistent with the TCGA and GTEx data.Conclusion Genomic changes and clinical characteristics of IATGs were identified,which may offer fresh perspectives linking the influenza A virus to cancer. 展开更多
关键词 Genomic changes Immune microenvironment Prognosis Drug resistance Experimental validation
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Fine mapping of the powdery mildew resistance gene PmXQ-0508 in bread wheat
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作者 Zejun Qian Guohao Han +11 位作者 Ningning Yu Cheng Liu Ran Han Paula E.Jameson jiaojiao wang Ya Zhao Bei Xiao Ruishan Liu Jiadong Zhang Yuli Jin Hongjie Li Pengtao Ma 《The Crop Journal》 SCIE CSCD 2024年第4期1176-1184,共9页
In a wheat breeding line XQ-0508 showing consistent resistance to powdery mildew disease,a recessive gene,designated PmXQ-0508,was identified and mapped to a distal region on chromosome arm 2BS.Of three resistance-ass... In a wheat breeding line XQ-0508 showing consistent resistance to powdery mildew disease,a recessive gene,designated PmXQ-0508,was identified and mapped to a distal region on chromosome arm 2BS.Of three resistance-associated genes in this region,one encoding a protein kinase was selected as the primary candidate for PmXQ-0508.Ten closely linked DNA markers developed in the study could be used for marker-assisted selection for powdery-mildew resistance in breeding programs. 展开更多
关键词 Wheat powdery mildew PmXQ-0508 BSR-Seq Fine mapping Marker-assisted selection
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A simulation study of polarization characteristics of ultrathin CsPbBr3 nanowires with different cross-section shapes and sizes
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作者 杨康 胡回清 +3 位作者 王娇娇 邓玲玲 陆云清 王瑾 《Chinese Physics B》 SCIE EI CAS CSCD 2023年第2期341-346,共6页
The polarization characteristics of ultrathin CsPbBr3nanowires are investigated. Especially, for the height of crosssection of nanowires between 2 nm and 25 nm, the normalized intensity and polarization ratio ρ of Cs... The polarization characteristics of ultrathin CsPbBr3nanowires are investigated. Especially, for the height of crosssection of nanowires between 2 nm and 25 nm, the normalized intensity and polarization ratio ρ of CsPbBr3nanowires with triangular, square and hexagonal cross-section shapes are compared. The results show that, along with the increase of the height of cross-section, the polarization ratios of these three nanowires decrease until T = 15 nm, and increase afterwards.Also, along with the increase of the cross-section area up to 100 nm~2, the polarization ratios of these three nanowires increase too. In general, for the same height or area, the polarization ratio ρ of these nanowires follows ρhexagon> ρsquare>ρtriangle. Therefore, the nanowire with the hexagonal cross-section should be chosen, where for a cross-section height of 2 nm and a length-height ratio of 20 : 1, the maximal polarization ratio is 0.951 at the longitudinal center of the NW. Further,for the hexagonal NW with a cross-section height of 10 nm, the hexagonal NW with a length-height ratio of 45 : 1 exhibits the maximal polarization ratio at the longitudinal center of the NW. These simulation results predict the feasible size and shape of CsPbBr3nanowire devices with high polarization ratios. 展开更多
关键词 CsPbBr3 NANOWIRE polarization characteristics
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Analysis on Antibacterial, Detumescent and Antioxidant Activity of Huoshan Large-leaf Yellow Tea
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作者 Jinwu CHEN Wen HU +4 位作者 Yimeng LI jiaojiao wang Yafei LIU Yi LI Lulu QI 《Medicinal Plant》 CAS 2023年第4期1-5,共5页
[Objectives] To provide experimental basis for the effective development and utilization of Huoshan large-leaf yellow tea resources and the screening of safe and effective active ingredients of large-leaf yellow tea. ... [Objectives] To provide experimental basis for the effective development and utilization of Huoshan large-leaf yellow tea resources and the screening of safe and effective active ingredients of large-leaf yellow tea. [Methods] The active substances of Huoshan large-leaf yellow tea were extracted by hot-water extraction, and the freeze-dried powder of Huoshan large-leaf yellow tea was obtained by freeze drying. The antibacterial activity of the extract was preliminarily confirmed using the Oxford cup method, and its antimicrobial spectrum was analyzed using 14 strains. A xylene-induced mouse auricle swelling test was carried out to detect the swelling inhibition rate of the extract and analyze its in-vitro detumescent activity. Then, the antioxidant activity of the extract was identified through a DPPH free radical scavenging capacity test and a ferric reducing antioxidant power assay. [Results] The extract had significant inhibitory effects on various bacteria. The extract could effectively inhibit the growth of Escherichia coli, Staphylococcus aureus, Enterococcus hirae, Acinetobacter baumannii, Klebsiella pneumonia, Pseudomonas aeruginosa, Bacillus subtilis , and other strains. The diameter of the inhibition zone increased with the increase of sample concentration. The extract had a significant inhibitory effect on auricle swelling induced by xylene in mice. When the concentration of the drug reached 1.0 mg/mL, its inhibition rate on mouse auricle swelling reached 55.2% ( P <0.01), slightly lower than the swelling inhibition rate of the aspirin group (66.52%, P <0.01). The results of the antioxidant test showed that large-leaf yellow tea extract also had strong activity. Within the concentration range of 0.1-1.0 mg/mL, its DPPH radical scavenging rate increased with the increase of sample concentration. Within the concentration range of 0.1-1.0 mg/mL, its DPPH radical scavenging rate increased with the increase of sample concentration. When the concentration reached 1.0 mg/mL, the scavenging rate reached 69.75%. The Fe 3+ -reduction capacity of the extract also increased with the increase of sample concentration within the concentration range of 0.1-2.5 mg/mL. When the concentration was 2.5 mg/mL, the reducing power of the extract reached 1.43±0.04. However, its DPPH free radical scavenging rate and reducing power were slightly lower than the capacity of V C at the same concentration. [Conclusions] The extract of Huoshan large-leaf yellow tea obtained by hot-water extraction had strong activity in many aspects, including inhibiting the growth of various microbes, subsiding swelling in vitro and resisting oxidation. These experimental results provide certain guiding significance for the basic research of Huoshan large-leaf yellow tea extract, as well as experimental data support for the subsequent development of functional foods and drugs of Huoshan large-leaf yellow tea. 展开更多
关键词 Huoshan large-leaf yellow tea Antibacterial activity DETUMESCENCE Antioxidant activity
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Progress of clinical decision support systems in stroke nursing care
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作者 Hainan Liu Lina Qi +2 位作者 jiaojiao wang Bo Zhao Jiaxin Mu 《Journal of Translational Neuroscience》 2023年第1期7-11,共5页
Stroke is characterized by high incidence,high recurrence,high disability,and high morbidity and mortality in China,resulting in a heavy social and clinical burden.A clinical decision support system,as an intelli-gent... Stroke is characterized by high incidence,high recurrence,high disability,and high morbidity and mortality in China,resulting in a heavy social and clinical burden.A clinical decision support system,as an intelli-gent computer system,can assist nurses in decision-mak-ing to collect information quickly,make the most suitable personalized decisions for patients,and improve nurses’decision-making judgment and quality of care.Promoting the development and application of decision support sys-tems in stroke nursing significantly enhances the nursing staff’s work quality and patients’prognosis.Therefore,this paper reviews the research progress of domestic and international clinical decision support systems in stroke nursing care to provide other researchers with specific research directions for developing and applying decision support systems in stroke nursing care. 展开更多
关键词 clinical decision support systems STROKE nursing care
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Anti-aging activity and their mechanisms of natural food-derived peptides:current advancements
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作者 Jialong Li jiaojiao wang +8 位作者 Ning Zhang Ying Li Zizhe Cai Guanghui Li Zhongbo Liu Zhiping Liu Yong wang Xin Shao Jing Chen 《Food Innovation and Advances》 2023年第4期272-290,共19页
Recently,there has been a growing focus on researching ways to delay aging and protect against age-related illnesses.Small molecular exogenous peptides,sourced from dietary elements like animals,plants,and microorgani... Recently,there has been a growing focus on researching ways to delay aging and protect against age-related illnesses.Small molecular exogenous peptides,sourced from dietary elements like animals,plants,and microorganisms,have demonstrated considerable potential in exerting anti-aging effects.Notably,natural food-derived peptides have exhibited enhanced stability,safety,absorption efficiency,and heightened biological activity.These attributes position them with a greater potential for mitigating aging-related disorders compared to alternative anti-aging drugs or phytochemicals.This review summarizes the origins,structural attributes,and isolation methods of natural foodderived peptides with anti-aging properties.It also explores how these external peptides improve aging-related conditions such as neurodegenerative diseases,skin aging,and metabolic disorders.The underlying mechanisms dictating their impact on well-conserved signaling pathways—encompassing oxidative stress,inflammation,apoptosis,and collagen synthesis—are meticulously elucidated.This paper engages in an insightful exploration of the key challenges and pivotal trajectories,grounded in ongoing research endeavors.As a result,this review is poised to offer authoritative scientific guidance and invaluable support for the practical implementation of natural food-derived peptides in the realm of anti-aging applications within the food,pharmaceutical,and cosmetic industries. 展开更多
关键词 properties. OXIDATIVE AGING
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Near-infrared spectroscopy(NIRS) evaluation and regional analysis of Chinese faba bean(Vicia faba L.) 被引量:3
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作者 jiaojiao wang Hao Liu Guixing Ren 《The Crop Journal》 SCIE CAS 2014年第1期28-37,共10页
To analyze the nutritional composition of faba bean(Vicia faba L.) seed, estimation models were developed for protein, starch, oil, and total polyphenol using near infrared spectroscopy(NIRS). Two hundred and forty-fo... To analyze the nutritional composition of faba bean(Vicia faba L.) seed, estimation models were developed for protein, starch, oil, and total polyphenol using near infrared spectroscopy(NIRS). Two hundred and forty-four samples from twelve producing regions were measured in both milled powder and intact seed forms. Partial least squares(PLS) regression was applied for model development. The model based on ground seed powder was generally superior to that based on the intact seed. The optimal seed powder-based models for protein, starch, and total polyphenol had coefficients of correlation(r2) of 0.97, 0.93 and 0.89, respectively. The relationship between nutrient contents and twelve producing areas was determined by two-step cluster analysis. Three distinct groupings were obtained with region-constituent features, i.e., Group 1 of high oil, Group 2 of high protein, and Group 3 of high starch as well as total polyphenol. The clustering accuracy was 79.5%. Moreover, the nutrition contents were affected by seeding date, longitude, latitude, and altitude of plant location. Cluster analysis revealed that the differences in the seed were strongly influenced by geographical factors. 展开更多
关键词 VICIA faba L.NIRS TWO-STEP CLUSTER analysis SEED quality GERMPLASM source
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Is male condition corrected with song features in Dusky Warblers(Phylloscopus fuscatus) 被引量:3
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作者 jiaojiao wang Jianping Liu +3 位作者 Zhenqun Zhang Hongxin Ren Lijie Gao Jianhua Hou 《Avian Research》 CSCD 2019年第2期221-227,共7页
Background: Birdsong is an important form of communication that plays an important role in territorial defense and mate attraction by conveying valuable information. While body-size and song frequency are often negati... Background: Birdsong is an important form of communication that plays an important role in territorial defense and mate attraction by conveying valuable information. While body-size and song frequency are often negatively correlated among species, this relationship is only found in a few songbirds. Previous studies on the Dusky Warbler (Phylloscopus fuscatus) found that there was a positive correlation between tarsus length and peak frequency. And heavier male Dusky Warblers possess better territories and obtain more opportunities for mating;body condition may be related to reproduction of birds, so females may choose heavier mates or better body condition based on the singing characteristics of males. Methods: We recorded spontaneous song and measured morphology of 33 male Dusky Warblers in Saihanba Forest Farm area between July 5 and August 10, 2015. We chose body weight as an indicator of body size and defined body condition as residuals from a linear regression between body weight and tarsus length. Frist, we used Pearson correlation to analyze whether date and time of day were correlated with weight, and then we used linear regression to analyze whether sound features could indicate the body weight and body condition. We call body weight and body condition the male condition. Results: We found no effect of date and time of day on weight, and we showed a correlation between the male condition and song features in the small songbird, Dusky Warbler. Maximum trill quality and maximum peak frequency of songs were negatively related to male condition;the mean number of syllables of songs and maximum high frequency of songs were positively correlated with body weight and body condition. Conclusions: In the small songbird, Dusky Warbler, four song parameters, including maximum trill quality, mean number of syllables of songs, maximum peak frequency of songs, maximum high frequency of songs, significantly predicted male condition change of which the most important song characteristic for male condition was maximum trill quality. This study suggested that the extreme song features were more constrained by male condition than mean sound characteristics. 展开更多
关键词 Bird SONG Dusky WARBLER MALE CONDITION MALE weight SONG characteristics
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Coevolution of acoustical communication between obligate avian brood parasites and their hosts 被引量:1
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作者 jiaojiao wang Qihong Li Canchao Yang 《Avian Research》 CSCD 2020年第4期367-379,共13页
The mutually antagonistic processes producing adaptations and counter-adaptations in avian brood parasites and their hosts provide a model system for the study of coevolution;this topic has long been an area of focus ... The mutually antagonistic processes producing adaptations and counter-adaptations in avian brood parasites and their hosts provide a model system for the study of coevolution;this topic has long been an area of focus in ornithology and evolutionary biology.Although there is an extensive body of literature dealing with avian brood parasitism,few empirical studies have considered the effects of the coevolutionary processes associated with brood parasitism on the acoustic characteristics of parent–offspring communication.Under the strong selection pressures associated with brood parasitism,parasitic birds may,for instance,produce deceptive songs.The host may in turn evolve the ability to recognize these sounds as deceptive.At present,the mechanisms underlying the different competitive strategies employed by hosts and parasitic birds remain unclear.Here,we reviewed previous studies that investigated acoustic traits in scenarios of brood parasitism,highlighting possible adaptive functions.Using a meta-analysis,we identified no heterogeneity among studies of begging call adaptations in parasitic nestlings.However,our results may have been affected by the small number of applicable papers available for analysis.Our meta-analysis also suggested that studies of acoustic communication and transmission in adult hosts were highly heterogenous,suggesting that research methods were inconsistent among studies.Finally,we identified knowledge gaps and proposed several lines of future research. 展开更多
关键词 Acoustic communication Brood parasitism Coevolution Parasitic adaptations Anti-parasitic adaptations
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Toward a Neurophysiological Measure of Image Quality Perception Based on Algebraic Topology Analysis
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作者 Chang Liu Xiaoyu Ma +2 位作者 Yijie Zhou jiaojiao wang Dingguo Yu 《China Communications》 SCIE CSCD 2022年第2期31-38,共8页
The bandwidth of internet connections is still a bottleneck when transmitting large amounts of images,making the image quality assessment essential.Neurophysiological assessment of image quality has highlight advantag... The bandwidth of internet connections is still a bottleneck when transmitting large amounts of images,making the image quality assessment essential.Neurophysiological assessment of image quality has highlight advantages for it does not interfere with natural viewing behavior.However,in JPEG compression,the previous study is hard to tell the difference between the electroencephalogram(EEG)evoked by different quality images.In this paper,we propose an EEG analysis approach based on algebraic topology analysis,and the result shows that the difference between Euler characteristics of EEG evoked by different distortion images is striking both in the alpha and beta band.Moreover,we further discuss the relationship between the images and the EEG signals,and the results implied that the algebraic topological properties of images are consistent with that of brain perception,which is possible to give birth to braininspired image compression based on algebraic topological features.In general,an algebraic topologybased approach was proposed in this paper to analyze the perceptual characteristics of image quality,which will be beneficial to provide a reliable score for data compression in the network and improve the network transmission capacity. 展开更多
关键词 image quality assessment ELECTROENCEPHALOGRAM algebraic topology analysis Euler characteristic
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Use of 3D-printed animal models as a standard method to test avian behavioral responses toward nest intruders in the studies of avian brood parasitism
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作者 Xiangyang Chen Yan Cai +1 位作者 jiaojiao wang Canchao Yang 《Avian Research》 SCIE CSCD 2022年第4期487-490,共4页
Living and/or non-living animal models are often used as stimuli to observe the behavioral responses of the target animals.In the past,parasites,predators,and harmless controls have been used to test host anti-parasit... Living and/or non-living animal models are often used as stimuli to observe the behavioral responses of the target animals.In the past,parasites,predators,and harmless controls have been used to test host anti-parasitism defense behavior,and their taxidermy specimens have been widely used as a set of standard methods for the study of avian brood parasitism.In recent years,with the rapid development of 3D-printing technology,3D-printed bird models are expected to be applied as a standard method in the study of avian brood parasitism.To evaluate the use of 3D-printed models,this study tests the reaction of Oriental Reed Warbler(Acrocephalus orientalis)towards predators,parasites,or controls,and compares the reaction among different nest intruders and between taxidermy specimens and 3D-printed animal models.It was found that the Oriental Reed Warbler responded most aggressively to the parasite,followed by predator,and finally the control;the results were consistent between the reaction to taxidermy specimens and 3D-printed animal models,indicating that 3D-printed models could serve as a substitute for taxidermy specimens.We propose a series of advantages of using 3D-printed models and suggest them to be a standard method for widespread use in future studies of avian brood parasitism. 展开更多
关键词 Animal behavior Cuckoo parasitism Taxidermy specimens 3D-printed technology
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Research on Ecological Corridor Planning of Lanzhou Yuzhong Ecological Innovation City from the Perspective of Ecological Civilization
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作者 jiaojiao wang Fenli Chen +1 位作者 Weihong wang Libao Dou 《Frontiers Research of Architecture and Engineering》 2021年第2期21-29,共9页
The practice and research of ecological civilization is a focus of current planning and design,as well as a scientific strategy under the current situation of resource constraint,environmental degradation and ecosyste... The practice and research of ecological civilization is a focus of current planning and design,as well as a scientific strategy under the current situation of resource constraint,environmental degradation and ecosystem degradation.Urban elements such as buildings,green land,farmland,water systems and mountains can be connected by ecological corridors into a green ecological system design.At present,many ecological and environmental problems,such as urban heat island effect,fog and haze,automobile exhaust have a negative effect on the construction of social ecological environment.In order to build a new modern city with prosperous economy,beautiful environment and social civilization,scientific and efficient ecological corridors should be designed to improve the environmental quality of the eco-city,and promote the construction and development of ecological civilization and green cities.Based on the relevant research and specific practices of ecological corridors at home and abroad,combine the needs of the planning and construction of the Yuzhong Ecological Innovation City,and discuss on the connotation and characteristics of ecological corridors,and discuss the key elements of ecological corridor planning.This article will take the ecological corridor planning of Yuzhong Eco-Innovation City as an example.We design ecological corridor based on field investigation,literature and geographic information system..The planning and design of the ecological corridor in the planning area proposed in this paper can provide positive suggestion on the planning and design of the ecological corridor in other ecological innovation cities. 展开更多
关键词 Ecological civilization Ecological corridor Ecological planning Yuzhong Ecological Innovation City
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Anti-atherosclerotic effects and molecular targets of ginkgolide B from Ginkgo biloba 被引量:1
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作者 Weile Ye jiaojiao wang +10 位作者 Peter JLittle Jiami Zou Zhihua Zheng Jing Lu Yanjun Yin Hao Liu Dongmei Zhang Peiqing Liu Suowen Xu Wencai Ye Zhiping Liu 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2024年第1期1-19,共19页
Bioactive compounds derived from herbal medicinal plants modulate various therapeutic targets and signaling pathways associated with cardiovascular diseases(CVDs),the world’s primary cause of death.Ginkgo biloba,a we... Bioactive compounds derived from herbal medicinal plants modulate various therapeutic targets and signaling pathways associated with cardiovascular diseases(CVDs),the world’s primary cause of death.Ginkgo biloba,a well-known traditional Chinese medicine with notable cardiovascular actions,has been used as a cardio-and cerebrovascular therapeutic drug and nutraceutical in Asian countries for centuries.Preclinical studies have shown that ginkgolide B,a bioactive component in Ginkgo biloba,can ameliorate atherosclerosis in cultured vascular cells and disease models.Of clinical relevance,several clinical trials are ongoing or being completed to examine the efficacy and safety of ginkgolide B-related drug preparations in the prevention of cerebrovascular diseases,such as ischemia stroke.Here,we present a comprehensive review of the pharmacological activities,pharmacokinetic characteristics,and mechanisms of action of ginkgolide B in atherosclerosis prevention and therapy.We highlight new molecular targets of ginkgolide B,including nicotinamide adenine dinucleotide phosphate oxidases(NADPH oxidase),lectin-like oxidized LDL receptor-1(LOX-1),sirtuin 1(SIRT1),platelet-activating factor(PAF),proprotein convertase subtilisin/kexin type 9(PCSK9)and others.Finally,we provide an overview and discussion of the therapeutic potential of ginkgolide B and highlight the future perspective of developing ginkgolide B as an effective therapeutic agent for treating atherosclerosis. 展开更多
关键词 Cardiovascular disease Atherosclerosis Ginkgo biloba Ginkgolide B Endothelial dysfunction LOX-1 PCSK9 PAF-R antagonist
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FGF4 protects the liver from immune-mediated injury by activating CaMKKβ-PINK1 signal pathway to inhibit hepatocellular apoptosis
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作者 Zhifeng Huang Tongtong Pan +13 位作者 Liang Xu Lu Shi Xiong Ma Liya Zhou Luyao wang jiaojiao wang Guoqing Zhu Dazhi Chen Lingtao Song Xiaomin Pan Xiaodong wang Xiaokun Li Yongde Luo Yongping Chen 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2024年第4期1605-1623,共19页
Immune-mediated liver injury (ILI) is a condition where an aberrant immune response due to various triggers causes the destruction of hepatocytes. Fibroblast growth factor 4 (FGF4) was recently identified as a hepatop... Immune-mediated liver injury (ILI) is a condition where an aberrant immune response due to various triggers causes the destruction of hepatocytes. Fibroblast growth factor 4 (FGF4) was recently identified as a hepatoprotective cytokine;however, its role in ILI remains unclear. In patients with autoimmune hepatitis (type of ILI) and mouse models of concanavalin A (ConA)- or S-100-induced ILI, we observed a biphasic pattern in hepatic FGF4 expression, characterized by an initial increase followed by a return to basal levels. Hepatic FGF4 deficiency activated the mitochondria-associated intrinsic apoptotic pathway, aggravating hepatocellular apoptosis. This led to intrahepatic immune hyper-reactivity, inflammation accentuation, and subsequent liver injury in both ILI models. Conversely, administration of recombinant FGF4 reduced hepatocellular apoptosis and rectified immune imbalance, thereby mitigating liver damage. The beneficial effects of FGF4 were mediated by hepatocellular FGF receptor 4, which activated the Ca^(2+)/calmodulin-dependent protein kinasekinase 2 (CaMKKβ) and its downstream phosphatase and tensin homologue-induced putative kinase 1 (PINK1)-dependent B-cell lymphoma 2-like protein 1-isoform L (Bcl-XL) signalling axis in the mitochondria. Hence, FGF4 serves as an early response factor and plays a protective role against ILI, suggesting a therapeutic potential of FGF4 and its analogue for treating clinical immune disorder-related liver injuries. 展开更多
关键词 Fibroblast growthfactor 4 Fibroblast growth factor receptor 4 Immune liver injury Ca^(2+)/Calmodulin dependent protein
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AI for science: Predicting infectious diseases
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作者 Alexis Pengfei Zhao Shuangqi Li +5 位作者 Zhidong Cao Paul Jen-Hwa Hu jiaojiao wang Yue Xiang Da Xie Xi Lu 《Journal of Safety Science and Resilience》 EI CSCD 2024年第2期130-146,共17页
The global health landscape has been persistently challenged by the emergence and re-emergence of infectious diseases.Traditional epidemiological models,rooted in the early 2oth century,have provided foundational in-s... The global health landscape has been persistently challenged by the emergence and re-emergence of infectious diseases.Traditional epidemiological models,rooted in the early 2oth century,have provided foundational in-sights into disease dynamics.However,the intricate web of modern global interactions and the exponential growth of available data demand more advanced predictive tools.This is where AI for Science(AI4S)comes into play,offering a transformative approach by integrating artificial intelligence(Al)into infectious disease pre-diction.This paper elucidates the pivotal role of AI4s in enhancing and,in some instances,superseding tradi-tional epidemiological methodologies.By harnessing AI's capabilities,AI4S facilitates real-time monitoring,sophisticated data integration,and predictive modeling with enhanced precision.The comparative analysis highlights the stark contrast between conventional models and the innovative strategies enabled by AI4S.In essence,Al4S represents a paradigm shift in infectious disease research.It addresses the limitations of traditional models and paves the way for a more proactive and informed response to future outbreaks.As we navigate the complexities of global health challenges,Al4S stands as a beacon,signifying the next phase of evolution in disease prediction,characterized by increased accuracy,adaptability,and efficiency. 展开更多
关键词 AI for science(AI4S) Data integration Global healthchallenges Infectious disease prediction Predictive modeling Real-timemonitoring
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Author correction to‘FGF4 protects the liver from immune-mediated injury by activating CaMKKβ-PINK1 signal pathway to inhibit hepatocellular apoptosis’[Acta Pharm Sin B 14(2024)1605–1623]
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作者 Zhifeng Huang Tongtong Pan +13 位作者 Liang Xu Lu Shi Xiong Ma Liya Zhou Luyao wang jiaojiao wang Guoqing Zhu Dazhi Chen Lingtao Song Xiaomin Pan Xiaodong wang Xiaokun Li Yongde Luo Yongping Chen 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2024年第6期2791-2793,共3页
The authors regret that due to the mistake of copying and pasting in the process of assembling figures and negligence in the proofreading,there are picture pasting errors in Fig.8 and Supporting Information Fig.S2,res... The authors regret that due to the mistake of copying and pasting in the process of assembling figures and negligence in the proofreading,there are picture pasting errors in Fig.8 and Supporting Information Fig.S2,respectively,but the above errors did not affect the conclusion.The author has now revised Fig.8 and Fig.S2 as follows.The authors apologize for any inconvenience caused to the journal and readers. 展开更多
关键词 journal CORRECTION CONCLUSION
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CHRDL1基因无义变异引起大角膜免疫反应
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作者 史平玲 但汉东 +6 位作者 王艳歌 王娇娇 张贝贝 魏圆梦 唐贺 李苗 宋宗明 《中华眼视光学与视觉科学杂志》 CAS CSCD 北大核心 2024年第6期450-459,共10页
目的:确定先天性大角膜一家系致病基因变异,并探讨该基因致病机制。方法:实验研究。于2022年7月采集一X连锁大角膜(MGC1)家系先证者1例和其他家系成员2例的外周静脉血标本。并详细采集患者病史后,对患者行最佳矫正视力(BCVA)、眼压、裂... 目的:确定先天性大角膜一家系致病基因变异,并探讨该基因致病机制。方法:实验研究。于2022年7月采集一X连锁大角膜(MGC1)家系先证者1例和其他家系成员2例的外周静脉血标本。并详细采集患者病史后,对患者行最佳矫正视力(BCVA)、眼压、裂隙灯显微镜联合前置镜、眼前节分析(OrbscanⅡ)、角膜地形图和眼底彩色照相检查。应用包含439个基因的眼前节疾病检测Panel和包含22个基因的青光眼检测Panel进行靶向捕获富集及高通量测序,筛选与疾病表型相关的致病基因变异,并使用Sanger测序进行验证。利用RT-PCR和免疫蛋白印迹法检测CHRDL1基因mRNA和蛋白的表达;荧光显微镜观察绿色荧光蛋白的表达。通过转录组测序和生物信息学分析,检测CHRDL1无义变异对分子功能和信号通路的影响。数据均采用独立样本t检验进行分析。结果:先证者被诊断为MGC1,眼压最高达27 mmHg(1 mmHg=0.133 kPa);角膜中央厚度右眼为469μm,左眼为470μm,均减少;角膜直径右眼为13.95 mm,左眼为13.65 mm。基因检测结果显示,先证者CHRDL1基因存在c.36delC(p.Tyr12^(*))半合子无义变异。与pHBLV-CHRDL1 wt组比较,pHBLV-CHRDL1 Tyr12^(*)组CHRDL1蛋白表达显著下降(t=24.16,P<0.001),CHRDL1Tyr12^(*)变异能够激活免疫系统信号通路并促进炎症因子和趋化因子表达。结论:CHRDL1基因c.36delC(p.Tyr12^(*))无义变异为MGC1家系的变异位点,该变异激活的免疫信号通路可能在MGC1的发病机制中发挥重要作用。 展开更多
关键词 大角膜 青光眼 CHRDL1基因 免疫反应
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Phase separation of the nuclear pore complex facilitates selective nuclear transport to regulate plant defense against pathogen and pest invasion 被引量:4
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作者 jiaojiao wang Gaofeng Pei +8 位作者 Yupei wang Dewei Wu Xiaokang Liu Gaoming Li Jianfang He Xiaolin Zhang Xiaoyi Shan Pilong Li Daoxin Xie 《Molecular Plant》 SCIE CSCD 2023年第6期1016-1030,共15页
The nuclear pore complex(NPC),the sole exchange channel between the nucleus and cytoplasm,is composed of several subcomplexes,among which the central barrier determines the permeability/selectivity of the NPC to domin... The nuclear pore complex(NPC),the sole exchange channel between the nucleus and cytoplasm,is composed of several subcomplexes,among which the central barrier determines the permeability/selectivity of the NPC to dominate the nucleocytoplasmic trafficking essential for many important signaling events in yeast and mammals.How plant NPC central barrier controls selective transport is a crucial question remaining to be elucidated.In this study,we uncovered that phase separation of the central barrier is critical for the permeability and selectivity of plant NPC in the regulation of various biotic stresses.Phenotypic assays of nup62 mutants and complementary lines showed that NUP62 positively regulates plant defense against Botrytis cinerea,one of the world’s most disastrous plant pathogens.Furthermore,in vivo imaging and in vitro biochemical evidence revealed that plant NPC central barrier undergoes phase separation to regulate selective nucleocytoplasmic transport of immune regulators,as exemplified by MPK3,essential for plant resistance to B.cinerea.Moreover,genetic analysis demonstrated that NPC phase separation plays an important role in plant defense against fungal and bacterial infection as well as insect attack.These findings reveal that phase separation of the NPC central barrier serves as an important mechanism to mediate nucleocytoplasmic transport of immune regulators and activate plant defense against a broad range of biotic stresses. 展开更多
关键词 nuclear pore complex phase separation plant defense MPK3
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Characteristics of N^(6)-methyladenosine Modification During Sexual Reproduction of Chlamydomonas reinhardtii 被引量:2
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作者 Ying Lv Fei Han +6 位作者 Mengxia Liu Ting Zhang Guanshen Cui jiaojiao wang Ying Yang Yun-Gui Yang Wenqiang Yang 《Genomics, Proteomics & Bioinformatics》 SCIE CAS CSCD 2023年第4期756-768,共13页
The unicellular green alga Chlamydomonas reinhardtii(hereafter Chlamydomonas)possesses both plant and animal attributes,and it is an ideal model organism for studying fundamental processes such as photosynthesis,sexua... The unicellular green alga Chlamydomonas reinhardtii(hereafter Chlamydomonas)possesses both plant and animal attributes,and it is an ideal model organism for studying fundamental processes such as photosynthesis,sexual reproduction,and life cycle.N^(6)-methyladenosine(m^(6)A)is the most prevalent mRNA modification,and it plays important roles during sexual reproduction in animals and plants.However,the pattern and function of m^(6)A modification during the sexual reproduction of Chlamydomonas remain unknown.Here,we performed transcriptome and methylated RNA immunoprecipitation sequencing(MeRIP-seq)analyses on six samples from different stages during sexual reproduction of the Chlamydomonas life cycle.The results show that m^(6)A modification frequently occurs at the main motif of DRAC(D=G/A/U,R=A/G)in Chlamydomonas mRNAs.Moreover,m^(6)A peaks in Chlamydomonas mRNAs are mainly enriched in the 30 untranslated regions(30 UTRs)and negatively correlated with the abundance of transcripts at each stage.In particular,there is a significant negative correlation between the expression levels and the m^(6)A levels of genes involved in the microtubule-associated pathway,indicating that m^(6)A modification influences the sexual reproduction and the life cycle of Chlamydomonas by regulating microtubule-based movement.In summary,our findings are the first to demonstrate the distribution and the functions of m^(6)A modification in Chlamydomonas mRNAs and provide new evolutionary insights into m^(6)A modification in the process of sexual reproduction in other plant organisms. 展开更多
关键词 N6-methyladenosine m^(6)A sequencing Sexual reproduction Microtubule-associated pathway PHOTOSYNTHESIS Chlamydomonas reinhardtii
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Actual Sensing Sensitivity and SNR Measurement of Optical Tweezers Based on Coulomb Force Input
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作者 jiaojiao wang Xingfan CHEN +3 位作者 Shaochong ZHU Zhenhai FU Nan LI Huizhu HU 《Photonic Sensors》 SCIE EI CSCD 2023年第1期56-65,共10页
Sensing sensitivity is the key performance of optical tweezers.By adjusting the frequency and magnitude of an applied Coulomb force as an input of optical tweezers,we directly measured the sensitivity and signal-to-no... Sensing sensitivity is the key performance of optical tweezers.By adjusting the frequency and magnitude of an applied Coulomb force as an input of optical tweezers,we directly measured the sensitivity and signal-to-noise ratio(SNR)of a system and indirectly calculated the actual noise magnitude.Combined with an output filter,the relationship between the SNR and bandwidths was studied.We established the simulation model of a system using Simulink and simulated the relationship between the SNR and magnitude of the input forces and filter bandwidths.In addition,we built an experimental system to determine the relationship between the SNR and the magnitude of the input forces and filter bandwidths.The actual minimum detectable force was measured as 1.8275×10^(-17)N at a 1Hz bandwidth.The experimental results were correlated with the simulation and theoretical results,confirming the effectiveness of the proposed method and demonstrating the high sensitivity of vacuum optical tweezers as mechanical sensors.We proposed a novel method of calibration and measurement of system sensing parameters by applying an actual force that was more direct and precise than the theoretical calculation method that requires accurate fitting parameters,such as the particle radius and density.This method can be employed to analyze the system noise and phase characteristics to confirm and improve the real performance of the system. 展开更多
关键词 Optical tweezers sensitivity Coulomb force SNR SIMULINK system noise characteristic
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