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Lineaperpetua gen.nov.:a new diatom genus in the Thalassiosirales supported by morphology and molecular data
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作者 Pan YU Lin YANG +4 位作者 Qingmin YOU john patrick kociolek Kangyu WANG Yonghong BI Quanxi WANG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2024年第1期277-290,共14页
Based on a combination of morphology and molecular data of ribosomal DNA genes,a new diatom genus Lineaperpetua gen.nov.Yu,You,Kociolek&Wang is described.The features that help define Lineaperpetua at the level of... Based on a combination of morphology and molecular data of ribosomal DNA genes,a new diatom genus Lineaperpetua gen.nov.Yu,You,Kociolek&Wang is described.The features that help define Lineaperpetua at the level of genus include:a tangentially undulated valve face;continuous cribra areolae on the valve interior consisting of pores arranged as strips;single rimoportula located inside the ring of marginal fultoportulae.Additionally,phylogenetic analysis based on nuclear small subunit(SSU)rDNA sequences and nuclear large subunit(LSU)rDNA gene placed the three strains of L.lacustris in a single,monophyletic clade at a considerable sequence distance from the other genera(Thalassiosira,Conticribra,Planktoniella,Shinodiscus,and other genera)belonging to Thalassiosirales.Despite the similarities with some species of Thalassiosira,Conticribra,and Spicaticribra,the suite of features found in Lineaperpetua differentiate it from these other genera.These molecular data and morphological characters suggest an affinity of the new genus to the Thalassiosiraceae. 展开更多
关键词 DIATOM MORPHOLOGY new genus PHYLOGENY TAXONOMY Thalassiosiraceae
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Morphological comparison and molecular marker screening of three Skeletonema species found in Changjiang(Yangtze)River Basin
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作者 Jingwen HU Yuxin YI +4 位作者 Zhengxin YANG john patrick kociolek Pan YU Quanxi WANG Qingmin YOU 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2024年第3期923-942,共20页
In our recent investigations of diatom diversity,we studied three species,namely,Skeletonema costatum,Skeletonema subsalsum,and Skeletonema potamos.Although they have been found frequently in Changjiang(Yangtze)River ... In our recent investigations of diatom diversity,we studied three species,namely,Skeletonema costatum,Skeletonema subsalsum,and Skeletonema potamos.Although they have been found frequently in Changjiang(Yangtze)River Basin,their morphological and molecular identification is difficult in taxonomy.Therefore,to integrate morphological and molecular biological approaches,we compared systematically their morphological characters and performed phylogenetic analysis.Twelve strains of Skeletonema were collected and isolated from Shanghai and Jiangsu,China,and their morphological characteristics were examined by light microscopy(LM)and the scanning electron microscopy(SEM).Based on morphological comparison,we determined that S.potamos is easy to distinguish from the other two species.The heavily silicified areolae,undulated or cleft distal ends of terminal fultoportula processes(TFPPs),absence of basal pores of fultoportula processes(FPPs),the rootlike protrusions of FPPs,and no interlocking connection are the stable characteristics that can be used to identify S.potamos.However,there are only two features that can distinguish S.costatum from S.subsalsum,namely the location of terminal rimoportulae(TRPs)and the distal shape of TFPPs.In addition,we amplified and sequenced nine common genetic markers from the strains,from which 101 sequences were obtained,constructed phylogenetic trees based on the nine genes and evaluated that seven genes can be used to identify S.potamos,and revealed that S.subsalsum is the closest known relative of S.costatum,and only ATP synthetase beta-subunit gene(atp B)is able to distinguish them from each other,which strongly support that it is an effective molecular marker for Skeletonema.This work provided a theoretical basis for the taxonomic study of Skeletonema. 展开更多
关键词 SKELETONEMA Changjiang River morphological change distinguishing morphological characteristics molecular marker
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A new species of Discostella guiyangensis sp.nov.(Bacillariophyta,Stephanodiscales)from Guiyang,China:morphology and phylogeny
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作者 Yandan XIANG Fangru NAN +3 位作者 Xudong LIU Shulian XIE john patrick kociolek Qi LIU 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2024年第4期1312-1324,共13页
We describe a new species of Discostella from Guiyang based on light and scanning electron microscopic observations,as well as molecular analysis.This species is morphologically distinguished from other species by a r... We describe a new species of Discostella from Guiyang based on light and scanning electron microscopic observations,as well as molecular analysis.This species is morphologically distinguished from other species by a relatively smooth and slightly recessed central area with marginal striae of unequal lengths forked near the margin.Marginal fultoportulae and a single rimoportula are situated between every two costae or on the costae.Both morphological characters and the concatenated data of rbc L and SSU rDNA indicate that Discostella guiyangensis is a unique and new species.According to divergence time estimation analysis,Discostella guiyangensis is the oldest species among the Discostella species sequenced currently.In addition,we complement molecular data of Discostella asterocostata and Discostella stelligera. 展开更多
关键词 Discostella MORPHOLOGY molecular analysis divergence time estimation new species
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A new diatom genus Spargeria gen.nov.(Bacillariophyceae)from Xizang,China,and the description of two new species
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作者 Yan LIU john patrick kociolek +5 位作者 Li WANG Xinxin LU Huan ZHU Guoxiang LIU Fengyang SUI Yawen FAN 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2024年第1期291-303,共13页
During our investigation of diatom biodiversity in Xizang,two species exhibited unique morphological features discriminative from all previously known genera.Herein we describe these two species and describe as new th... During our investigation of diatom biodiversity in Xizang,two species exhibited unique morphological features discriminative from all previously known genera.Herein we describe these two species and describe as new the genus,Spargeria gen.nov.The new genus features narrow to wide rectangular valves,narrow valve mantles,filiform raphe branches that occur on the valve face only,terminal raphe fissures straight or slightly deflected to same side,bow-tie shaped central areas,chambered striae present on the valve face only,being absent from the mantle,wider striae near the axial area and very narrow near the margin,multiseriate striae with small and round areolae that are occluded externally.Comparatively,Spargeria zhuii sp.nov.has larger and robust valves,radiate striae,with one divergent stria near the apices,while Spargeria chenia sp.nov.is smaller,with narrow valves,striae slightly radiate in the middle,becoming convergent or parallel near apices.This new genus belongs to the family Pinnulariaceae,and it was compared and contrasted with other genera of this family.Our work suggests the need for continued studies to document the biodiversity of diatoms in Xizang. 展开更多
关键词 Spargeria new genus Pinnulariaceae morphology Xizang
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New and interesting diatoms from the Shimen Wetwalls,Yunnan Province,China.Ⅱ.The diatom genus Nupela Vyverman&Compère(Bacillariophyceae)
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作者 Qi LIU Xi LUO +1 位作者 Shulian XIE john patrick kociolek 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第1期327-341,共15页
We detailed the valve morphology of five new species of diatom genus Nupela from wetwall communities in Yunnan Province,China,with light and scanning electron microscope.The five new species demonstrate great variabil... We detailed the valve morphology of five new species of diatom genus Nupela from wetwall communities in Yunnan Province,China,with light and scanning electron microscope.The five new species demonstrate great variability within the genus,as three of them are biraphid and two are monoraphid.In addition,variation was noted in the structure of internal proximal raphe ends,with some species having anchor-shaped ends and other species have hooked ends.The genus Nupela has grown considerably in 30years since it was first proposed,going from a monotypic genus to over 85 taxa.Diagnosis of the genus is based on the presence of an external covering over the areolae.We discussed the systematic placement of Nupela within the naviculoid diatoms.Yunnan Province appears to harbor many endemic diatom taxa,and many regions of the province have yet to be studied. 展开更多
关键词 Nupela scanning electron microscope(SEM) Yunnan new species morphology China BACILLARIOPHYCEAE
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Qinia gen.nov.(Bacillariophyceae:Cymbellales)from Yunnan Province,China
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作者 Yan LIU john patrick kociolek +5 位作者 Maxim KULIKOVSKIY Anton GLUSHCHENKO Pan YU Quanxi WANG Xinxin LU Yawen FAN 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第5期1965-1977,共13页
An interesting group of cymbelloid diatoms was collected from lakes in Yunnan Province,China,and observations on their valve morphology made using light and scanning electron microscopy.These cymbelloid species all ha... An interesting group of cymbelloid diatoms was collected from lakes in Yunnan Province,China,and observations on their valve morphology made using light and scanning electron microscopy.These cymbelloid species all have apical pore fields,slit-like areolae,and areolar occlusions,and they all lack of stigmata.In this paper we propose the new genus Qinia gen.nov.for these taxa and describe them as new:Q.lashii sp.nov.,Q.aequalis sp.nov.,and Q.daliensis sp.nov.The genus Qinia gen.nov.has lanceolate valves asymmetrical about their apical axes,raphe located in the middle of valve,distal raphe ends bent to the dorsal margin that bisects the apical pore fields(APFs),no stigmata,areolae with slit-like external openings and projections occluding the areolar openings internally.This genus resembles the genus Cymbella in the presence of APFs,but differs from Cymbella by a lack of stigmata,and by having external distal raphe ends that bisect the apical pore fields.Like Reimeria,the external distal raphe ends bisect the lobes of the APF,but Qinia species differ from Reimeria in that they have no stigmata and the distal raphe ends are deflected dorsally,not ventrally.Comparisons were made between Qinia and other cymbelloid genera whose members possess apical pore fields.Features that distinguish each species of the new genus are also discussed. 展开更多
关键词 FRESHWATER new genus cymbelloid diatom FRESHWATER MORPHOLOGY
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Gomphonema Ehrenberg species from the Yuntai Mountains,Henan Province,China
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作者 Qi LIU Nini CUI +5 位作者 Jia FENG Junping LÜ Fangru NAN Xudong LIU Shulian XIE john patrick kociolek 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2021年第3期1042-1062,共21页
We report on eight species of the freshwater diatom genus Gomphonema from aquatic habitats from the Yuntai Mountains of Henan Province,China.This work represents the first detailed descriptions of the freshwater diato... We report on eight species of the freshwater diatom genus Gomphonema from aquatic habitats from the Yuntai Mountains of Henan Province,China.This work represents the first detailed descriptions of the freshwater diatoms from this centrally-located province in China.Of the eight taxa considered,five are new to science and another is given a"cf."designation.Four of the eight species are similar in morphological features to other,"classical"species,with external areolar occlusions forming C-shaped openings.Another species is astigmate,and has distinct siliceous papillae located marginally on the exterior of the valves;this morphology has not been recognized previously for the genus.Two of the species have internal areolar and stigma occlusions.The diversity of morphological types of species in Gomphonema may relate to the ecosystems,with more diverse ecosystems harboring greater diversity of these morphological groups of Gomphonema. 展开更多
关键词 Gomphonema new species BACILLARIOPHYCEAE MORPHOLOGY DIATOMS
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全新可持续加州科学院建筑设计
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作者 Renzo Piano john patrick kociolek Jean Rogers 《世界建筑导报》 2010年第1期78-79,共2页
项目地点:美国加州项目类型:建筑(教育)开工日期:2005年9月该项目综合考虑了可持续性和建筑方面的因素,并将其纳入大型公共建筑之中。
关键词 加州 建筑
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