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Comprehensive analyses of the proteome and ubiquitome revealed mechanism of high temperature accelerating petal abscission in tree peony 被引量:1
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作者 Chunying Liu Ziqi Liu +4 位作者 Yanchao Yuan Yuxi Zhang Yifu Fang junqiang chen Shupeng Gai 《Horticultural Plant Journal》 SCIE CAS CSCD 2024年第1期205-222,共18页
Tree peony(Paeonia suffruticosa Andrews)is a well-known ornamental plant with high economic value,but the short fluorescence is a key obstacle to its ornamental value and industry development.High temperature accelera... Tree peony(Paeonia suffruticosa Andrews)is a well-known ornamental plant with high economic value,but the short fluorescence is a key obstacle to its ornamental value and industry development.High temperature accelerates flower senescence and abscission,but the associated mechanisms are poorly understood.In this study,the tandem mass tag(TMT)proteome and label-free quantitative ubiquitome from tree peony cut flowers treated with 20℃for 0 h(RT0),20℃or 28℃for 60 h(RT60 or HT60)were examined based on morphological observation,respectively.Totally,6970 proteins and 1545 lysine ubiquitinated(Kub)sites in 844 proteins were identified.Hydrophilic residues(such as glutamate and aspartate)neighboring the Kub sites were in preference,and 36.01%of the Kub sites were located on the protein surface.The differentially expressed proteins(DEPs)and Kub-DEPs in HT60 vs RT60 were mainly enriched in ribosomal protein,protein biosynthesis,secondary metabolites biosynthesis,flavonoid metabolism,carbohydrate catabolism,and auxin biosynthesis and signaling revealed by GO and KEGG analysis,accompanying the increase of endogenous abscisic acid(ABA)accumulation and decrease of endogenous indoleacetic acid(IAA)level.Additionally,the expression patterns of six enzymes(SAMS,ACO,YUC,CHS,ANS and PFK)putatively with Kub modifications were analyzed by proteome and real-time quantitative RT-PCR.The cell-free degradation assays showed PsSAMS and PsACO proteins could be degraded via the 26 S proteasome system in tree peony flowers.Finally,a working model was proposed for the acceleration of flower senescence and abscission by high temperature.In summary,all results contributed to understanding the mechanism of flower senescence induced by high temperature and prolonging fluorescence in tree peony. 展开更多
关键词 Tree peony PROTEOME Ubiquitome High temperature Flower senescence
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不同照射野对达完全缓解食管鳞癌患者失败模式影响的分析 被引量:3
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作者 沈文斌 陈俊强 祝淑钗 《中国肿瘤临床》 CAS CSCD 北大核心 2021年第17期898-905,共8页
目的:探讨食管鳞癌患者接受不同照射野治疗后的失败模式,尤其是经治疗后达完全缓解(complete remission,CR)患者的复发及进展情况。方法:收集2011年1月至2014年12月于河北医科大学第四医院接受根治性放(化)疗的食管鳞癌患者701例,对符... 目的:探讨食管鳞癌患者接受不同照射野治疗后的失败模式,尤其是经治疗后达完全缓解(complete remission,CR)患者的复发及进展情况。方法:收集2011年1月至2014年12月于河北医科大学第四医院接受根治性放(化)疗的食管鳞癌患者701例,对符合入组条件的食管鳞癌患者进行回顾性分析,首先分析全组患者的总生存率和复发率;其次分析接受选择性淋巴结照射(elective nodal irradiation,ENI)和累及野照射(involved-field irradiation,IFI)这两组患者的复发情况及其复发部位的差异;接着分析不同治疗疗效患者复发情况及ENI和IFI两组治疗后达CR患者复发部位的差异;同时对影响全组患者出现复发的独立性因素进行多因素分析;最后对ENI和IFI两组患者的构成比进行倾向得分匹配(propensity score matching,PSM)分析,并进一步比较PSM后两组患者的复发的差异,且分析影响PSM后患者发的独立性因素。采用SPSS19.0统计软件进行统计分析。结果:患者1、3、5年复发率分别为27.6%、52.2%和59.4%,中位复发时间为11.6个月。IFI和ENI组复发率分别为47.3%和49.2%,差异无统计学意义(χ^(2)=0.182,P=0.670)。IFI与ENI两组患者复发部位有显著性差异(χ^(2)=10.372,P=0.006)。IFI与ENI两组患者近期疗效有显著性差异(χ^(2)=13.385,P=0.001);ENI和IFI中达CR患者的总体复发率(31.7%vs.45.2%)差异无统计学意义(χ^(2)=3.167,P=0.075)、复发部位差异亦无统计学意义(χ^(2)=3.457,P=0.178)。PSM分析后每组均为172例患者,两组患者总体复发率差异无统计学意义(χ^(2)=0.570,P=0.450),但复发部位有显著性差异(χ^(2)=110.513,P=0.005);IFI与ENI两组患者近期疗效有显著性差异(χ^(2)=7.226,P=0.027),PSM后与ENI组CR患者相比,IFI组CR患者的复发率(53.3%vs.对29.5%)显著性升高(χ^(2)=6.145,P=0.013),且两组患者复发部位亦有显著性差异(χ^(2)=7.467,P=0.024);近期疗效和食管癌病变部位为影响PSM后患者出现复发的独立性因素(P=0.014,0.018)。结论:ENI与IFI患者的总治疗失败率无显著性差异,但其复发部位存在显著性差异,与IFI组治疗后CR患者相比,ENI组患者的照射野外复发率显著性下降,但野内复发率较高。最终结论需要精心设计的、更大的多中心前瞻性试验结果来证实。 展开更多
关键词 食管肿瘤/食管鳞癌 根治性放(化)疗 照射方式 失败模式 完全缓解
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食管鳞癌患者根治性放疗预后列线图模型的构建—泛京津冀多中心回顾分析(3JECROG R-03A)
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作者 林宇 王鑫 +26 位作者 王澜 章文成 赵一电 葛小林 沈文斌 王平 庞青松 王晓敏 孙新臣 张开贤 胡苗苗 李苓 郝崇礼 乔学英 李高峰 徐勇刚 刘妙玲 郄帅 王雅棣 韩春 祝淑钗 路娜 许元基 李伟光 张怡萍 陈俊强 肖泽芬 《中国肿瘤临床》 CAS CSCD 北大核心 2023年第12期595-600,共6页
目的:构建列线图(nomogram)模型以预测食管鳞癌患者的预后情况,指导个体化治疗。方法:回顾性分析2002年1月至2016年12月国内10家放疗中心(泛京津冀食管癌协作组-3JECROG)收治的2680例根治性放疗食管鳞癌患者资料,随机分为训练组和验证组... 目的:构建列线图(nomogram)模型以预测食管鳞癌患者的预后情况,指导个体化治疗。方法:回顾性分析2002年1月至2016年12月国内10家放疗中心(泛京津冀食管癌协作组-3JECROG)收治的2680例根治性放疗食管鳞癌患者资料,随机分为训练组和验证组,根据训练组的预后因素构建nomogram模型,并进行训练组内部和验证组外部验证。分别以nomogram模型与AJCC/UICC分期评估两组患者预后及临床获益。结果:全组1、3、5年生存率分别为69.0%、37.7%、31.0%。多因素分析肿瘤部位、TNM分期、原发肿瘤体积和是否同步化疗是影响食管癌的独立预后因素(均P<0.05)。在训练组和验证组中nomogram模型的一致性指数(C-index)、AUC值均高于AJCC/UICC分期(均P<0.001)。基于nomogram模型分为低、中、高风险亚组与AJCC/UICC分期比较,nomogram模型的生存曲线之间具有显著性差异(P<0.001),且1、3、5年的总生存临床决策曲线(decision curve analysis,DCA)下面积均具有显著性差异。结论:本研究构建的nomogram模型较AJCC/UICC分期具有更好的预测能力,有助于食管癌患者的预后判断及指导个体化治疗。 展开更多
关键词 食管鳞癌 根治性放疗 预后模型 危险分层
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Quality of life and survival outcomes of patients with inoperable esophageal squamous cell carcinoma after definitive radiation therapy:A multicenter retrospective observational study in China from 2015 to 2016 被引量:1
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作者 Xin Wang Fei Liang +28 位作者 Xiaomin Wang Ye Wu Dejun Wang Yunjie cheng Jiao Li Yougai Zhang Bochen Sun Yu Lin Dandan Yu Xiaolin Ge Jingyi Shen Guangyue Yao Lei Wu Jihong Zhang Wei Jiang Nan Bi Zhilong Yu Qifeng Wang Zhe Yang Xinchen Sun junqiang chen Jianzhong Cao Hong Ge Jun Wang Xiangzhi Zhu Hao Jiang Yidian Zhao Kuaile Zhao Luhua Wang 《Journal of the National Cancer Center》 2023年第2期150-158,共9页
Objectives:To investigate the health-related quality of life(HRQL)of long-term survivors of inoperable esophageal squamous cell carcinoma(ESCC)treated with definitive radiation therapy,the real-world trends in the use... Objectives:To investigate the health-related quality of life(HRQL)of long-term survivors of inoperable esophageal squamous cell carcinoma(ESCC)treated with definitive radiation therapy,the real-world trends in the use of advanced radiation techniques,and their impact on the survival outcomes of ESCC patients.Methods:In this multicenter retrospective observational study,the medical records related to demographics and treatment of ESCC patients who were treated with definitive radiation therapy at 14 provincial hospitals in China from 1 January 2015 to 31 December 2016 were analyzed.A HRQL questionnaire was completed by survivors and collected by doctors at the final follow-up.The difference in quality of life between patients with or without recurrence was compared using the Wilcoxon-Mann-Whitney test.Overall survival(OS)was estimated using the Kaplan-Meier method and the group differences were assessed by unstratified log-rank test.The Cox proportional hazards model with Efron’s method of tie handling was used to calculate the risk factors for OS.Results:The data of a total of 3,308 patients were collected for this study,248 were excluded because of missing data,and a final of 3,060 patients were included in the analysis.Most patients(2,901;94.8%)received intensity-modulated radiotherapy(IMRT)/volumetric-modulated arc therapy(VMAT)/tomotherapy(TOMO).The 5-year OS rate was 30%.Patients who received either two-dimensional radiotherapy(2DRT;HR,2.43[95%CI,1.70-3.47];P<0.001)or three-dimensional radiotherapy(3DRT;HR,1.45[95%CI,1.14-1.84];P=0.003)had a significantly increased risk of death compared to those who received IMRT/VMAT/TOMO.Of the 716(23.4%)long-term survivors who completed the HRQL questionnaire,nearly 70%patients were still able to swallow normally or almost normally,and>80%patients did not experience weight loss.Nearly 80%patients found life very enjoyable or were fairly enjoying life.Conclusions:This large,multicenter retrospective study on ESCC patients who received definitive radiation ther-apy found that most ESCC survivors are satisfied with their quality of life.Most patients received advanced radiation technology.Patients who received either 2DRT or 3DRT had a significantly increased risk of death compared to those who received advanced radiation technology. 展开更多
关键词 Esophageal squamous cell carcinoma Radiation CHEMORADIOTHERAPY Quality of life Survival benefit Cancer survivor
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Multi-objective optimization-based prediction of excavation-induced tunnel displacement 被引量:6
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作者 Yuanqin Tao Wei He +2 位作者 Honglei Sun Yuanqiang Cai junqiang chen 《Underground Space》 SCIE EI 2022年第5期735-747,共13页
This paper proposes an inverse method for improving the prediction of tunnel displacements during adjacent excavation.In this framework,staged data assimilation and parameter identification are conducted using the mul... This paper proposes an inverse method for improving the prediction of tunnel displacements during adjacent excavation.In this framework,staged data assimilation and parameter identification are conducted using the multi-objective particle swarm optimization algorithm.Recent monitoring data are assumed to be more informative and assigned more weights in the multi-objective optimization to improve the prediction accuracy.Then,an empirical formula is applied to correct the time effect of tunnel displacement.The Kriging method is introduced to surrogate the finite element model to reduce computational cost.The proposed framework is verified using a typical staged“excavation nearing tunnel”case.The predictions using the updated parameters are in good agreement with the measurements.The identified values of underlying soil parameters are within the typical ranges for the unloading condition.The updated time effect indicates that tunnel displacements may develop excessively in the three months after the region S1-B is excavated to the bottom.The maximum vertical tunnel displacement may increase from the currently measured 12 mm to the calculated 26 mm if the later construction is suspended long enough.Subsequent constructions need to be timely conducted to restrain the time effect and control tunnel displacements. 展开更多
关键词 Tunnel displacement EXCAVATION Time effect Multi-objective particle swarm optimization Parameter identification
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