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水稻组蛋白H1三突变体的创建和转录组学分析
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作者 杨淇 魏子迪 +6 位作者 宋娟 童堃 杨柳 王佳涵 刘海燕 栾维江 马轩 《生物技术通报》 CAS CSCD 北大核心 2024年第4期85-96,共12页
【目的】组蛋白H1对于染色质高级结构的维持和稳定具有重要作用,研究水稻H1对基因表达的影响,为深入理解水稻H1的生物学调控功能提供依据。【方法】通过半定量RT-PCR与RT-qPCR对水稻4个H1基因进行表达分析,利用CRISPR技术创建水稻H1基... 【目的】组蛋白H1对于染色质高级结构的维持和稳定具有重要作用,研究水稻H1对基因表达的影响,为深入理解水稻H1的生物学调控功能提供依据。【方法】通过半定量RT-PCR与RT-qPCR对水稻4个H1基因进行表达分析,利用CRISPR技术创建水稻H1基因编辑植株,鉴定突变体表型,对突变体进行转录组学分析。【结果】水稻4个H1基因的表达比较广谱,在根中的表达较低;在T_(0)代CRISPR突变体筛选过程中发现H1.1-H1.4发生多种突变;在T_(1)代筛选到一株Osh1.1 Osh1.3 Osh1.4纯合三突变体,该三突变体具有多种发育缺陷,成为转录组分析的材料;进一步在T_(2)代得到三突和四突群体,该群体约25%为白化苗,植株生长迟缓,在响应干旱胁迫方面发生缺陷;对三突变体进行转录组学分析,鉴定到1055个差异表达基因,显著上调的基因约为下调基因的2.5倍,说明H1可能具有抑制基因表达的功能。【结论】在突变体中,光合作用、胁迫响应、氨基酸代谢和RNA代谢等多种途径均发生调控紊乱;其中,核糖体蛋白和光合作用相关基因显著上调,与干旱胁迫相关的脱氢酶基因显著下调。核糖体途径基因过量表达可能造成蛋白质稳态失调,导致植物发育缺陷。 展开更多
关键词 水稻 组蛋白H1 CRISPR 转录组测序 RT-QPCR
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Reverse Genetic Analysis of Transcription Factor Os Hox9, a Member of Homeobox Family, in Rice 被引量:5
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作者 AI Li-ping SHEN Ao +4 位作者 GAO Zhi-chao LI Zheng-long SUN Qiong-lin LI Ying-ying luan wei-jiang 《Rice science》 SCIE 2014年第6期312-317,共6页
Homeobox transcription factors participate in the growth and development of plants by regulating cell differentiation, morphogenesis and environmental signal response. To reveal the functions of these transcription fa... Homeobox transcription factors participate in the growth and development of plants by regulating cell differentiation, morphogenesis and environmental signal response. To reveal the functions of these transcription factors in rice, we constructed the RNAi vectors of OsHox9, a member of homeobox family, and analyzed the function of OsHox9 using reverse genetics. The plant height and tillering number of RNAi transgenic plants decreased compared with those of wild-type plants. Reverse transcdption-polymerase chain reaction analysis showed that OsHox9 expression reduced in the transgenic plants with phenotypic variance, whereas that in the transgenic plants without phenotypic variance was similar to that in the wild-type plants. This result suggests that the phenotypes of the transgenic plants were caused by RNAi effects. The tissue-specificity of OsHox9 expression indicated that it was expressed in different organs, with high expression in stem apical medstem and young panicles. Subcellular location of OsHox9 demonstrated that it was localized on the cell membrane. 展开更多
关键词 expression analysis homeobox transcription factor subcellular location reverse genetics RICE RNA interference
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高粱双粒突变体Dgs的遗传分析与基因定位
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作者 周诗晨 仪治本 +4 位作者 王馨翊 杨晓颖 孙丽娜 栾维江 梁闪闪 《生物技术通报》 CAS CSCD 北大核心 2022年第7期171-177,共7页
穗粒数对作物产量至关重要,对高粱双粒突变体基因进行定位,为下一步的基因克隆和功能分析奠定基础,为高粱产量性状的调控和解析提供依据。利用体视镜观察野生型和双粒突变体花器官表型,通过构建单粒材料晋粱5号和双粒突变体杂交的F群体... 穗粒数对作物产量至关重要,对高粱双粒突变体基因进行定位,为下一步的基因克隆和功能分析奠定基础,为高粱产量性状的调控和解析提供依据。利用体视镜观察野生型和双粒突变体花器官表型,通过构建单粒材料晋粱5号和双粒突变体杂交的F群体,分析突变体的遗传规律,采用BSA-seq测序与图位克隆相结合的方法进行连锁分析及基因定位。结果表明,与野生型相比,双粒突变体雌蕊和雄蕊数目增加,最终结一壳双粒;遗传分析表明双粒性状受1对显性基因控制;基因定位显示目的基因位于高粱第6染色体Indel2930和SSR7060标记之间,物理距离为404 kb。Dgs是一个全新的高粱双粒突变基因。 展开更多
关键词 高粱 双粒突变体 花器官 基因定位 遗传分析
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Genetic diversity center of cultivated soybean(Glycine max) in China——New insight and evidence for the diversity center of Chinese cultivated soybean 被引量:2
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作者 WANG Li-xia LIN Fan-yun +16 位作者 LI Lin-hai LI Wei YAN Zhe luan wei-jiang PIAO Ri-hua GUAN Yuan NING Xue-cheng ZHU Li MA Yan-song DONG Zhi-min ZHANG Hai-yan ZHANG Yue-qiang GUAN Rong-xia LI Ying-hui LIU Zhang-xiong CHANG Ru-zhen QIU Li-juan 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2016年第11期2481-2487,共7页
Information on the center of genetic diversity of soybean(Glycine max) will be helpful not only for designing efficient strategies for breeding programs, but also for understanding the domestication and origin of th... Information on the center of genetic diversity of soybean(Glycine max) will be helpful not only for designing efficient strategies for breeding programs, but also for understanding the domestication and origin of this species. Here, we describe an analysis of genetic diversity based on simple-sequence repeat(SSR) variations within a core collection of 2 111 accessions of Chinese soybean landraces. Prior to the diversity assessment, the geographic origin of each accession was mapped. The map was then divided into grids each 2.5° in latitude and 5° in longitude. We found two regions that had higher number of alleles(NA) and greater polymorphic information content(PIC) values than the others. These regions are adjacently located within grid position of 30°–35°N×105°–110°E, which includes the valley of the middle and lower reaches of the Wei River, and the valley of the upper reaches of the Hanjiang River. It was also observed that in many regions, genetic diversity decreased with the increase in distance from the center. Another region, in northern Hebei Province(115°–120°E×40°–42.5°N), was observed having higher diversity than any surrounding regions, indicating that this is a sub-center of soybean diversity. Based on the presented results, the domestication and origin of soybean are also discussed. 展开更多
关键词 Glycine max genetic resources SSRS diversity center DOMESTICATION
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Molecular Regulatory Network of Flowering by Photoperiod and Temperature in Rice 被引量:4
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作者 SONG Yuan-li luan wei-jiang 《Rice science》 2012年第3期169-176,共8页
Plants have an ability to flower under optimal seasonal conditions to ensure reproductive success.Photoperiod and temperature are two important season-dependent factors of plant flowering.The floral transition of plan... Plants have an ability to flower under optimal seasonal conditions to ensure reproductive success.Photoperiod and temperature are two important season-dependent factors of plant flowering.The floral transition of plants depends on accurate measurement of changes in photoperiod and temperature.Recent advances in molecular biology and genetics on Arabidopsis and rice reveals that the regulation of plant flowering by photoperiod and temperature are involved in a complicated gene network with different regulatory pathways,and new evidence and understanding were provided in the regulation of rice flowering.Here,we summarize and analyze different flowering regulatory pathways in detail in rice based on previous studies and our results,including short-day promotion,long-day suppression,long-day induction of flowering,night break,different light-quality and temperature regulation pathways. 展开更多
关键词 RICE FLOWERING PHOTOPERIOD temperature regulatory network
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