Ovarian Tumors in Senegalese Women: Impact of D-Loop Mutations between Healthy and Cancerous Tissues

In Senegal in particular, ovarian cancer, which is one of the most common gynecological cancers, accounts for 2.8% of deaths. The most important risk factor is genetic, with 10% of cases occurring in a context of genetic predisposition. The sequencing of the human genome, which has led to the discovery of millions of sequence variations, makes it possible to study variations within sequences. These variations are limited to Single Nucleotide Polymorphisms (SNPs) and this common form of polymorphism occurs approximately every 1000 bases in the human genome and 1.8 million SNPs are currently listed according to [1]. The aim of this study is to gain a better understanding of the impact of mutations in the D-loop region of mtDNA on ovarian cancer in Senegalese women. This study involved searching for mutations in our study population after DNA extraction and sequencing. Mutations were found after a comparison of our sequences with the Cambridge reference sequence (NC_012920). The mutations found in the DNA studied extend from position 7 to position 16568 and most of these mutations are located in the hypervariate zones (HV1 and HV2). Heteroplasmy with three mutant alleles was also found in certain variants. Common mutations were found in both healthy and cancerous tissues, with almost identical frequencies in both types of tissue. This enabled us to understand the spread of tumor cells throughout the ovary.

Phylogenetic Relationship and Molecular Divergence Dating Using SRY Gene Polymorphism about Four Ladoum Sheep Lineages in Senegal

Animal genetic resources are playing a vital role in livestock production and are essential to food security. The present study aims to contribute to a better understanding genetic local sheep breeds and to elucidate the phylogenetic relationships through the evolution of the SRY gene in four different lineages of Ladoum sheep raised in Senegal. After a brief analysis of genetic diversity, the phylogenetic relationships and molecular dating were inferred through haplotype networks and four phylogenetic reconstruction methods. The different haplotype networks are constructed with NETWORK ver. 5.0.0.0 using the Median-Joining method. Phylogenetic trees were reconstructed using neighbor-joining, maximum parsimony, maximum likelihood and Bayesian inference. The robustness of the nodes in phylogenetic trees of the three first methods was assessed by 1000 bootstraps. For Bayesian inference, the posterior probability distribution of the trees was estimated by 4 MCMC chains. 5,000,000 generations were performed for each of the chains by sampling the different parameters every 1000 generations. Results show a low polymorphism. Haplotypic diversity is much higher than the average nucleotide divergence between all pairs of haplotypes. The majority and central haplotype indicates a close relationship between “Batling” and “Tyson” individuals. “Birahim” lineage is very distinct from the rest. Phylogenetic trees confirm two genetically separate clades between “Birahim” and the other lineages. The period of divergence between “Birahim” lineage versus the common ancestor of the other three lineages was 2504 years ago. The polyphyly revealed in “Birahim” lindicates that this lineage does not contain the common ancestor of all individuals who compose it. It could therefore be derived from two or more sheep breeds with a common ancestor, Ovis aries. The monophyletic clade appears to be a group including a common ancestor and all of its genetic descendants. This group, bringing together the other three lineages, is in the process of being structured into sub-lineages. This study is the first to show that there are only two genetic lines within ladoum sheep in Senegal.

Diversity and Genetic Structuration of Populations of <i>Plutella xylostella</i>(Lepidoptera, Plutellidae), Cabbage Farming Destroyer in Senegal

Plutella xylostella, pointed out as the most dangerous destroyer of cabbage (Brassica olerarea), is a cosmopolitan species. In fact, owing to its large capacity of adaptation, P. xylestella colonizes any kind of area. This insect can bring about up to 90% of losses on cabbage farming. To control the insect, Senegalese farmers, very often, resort to high dose of chemical pesticides which are repetitively sprayed. The use of these chemical products gives rise to different varieties of resistant insects, which results in the emergence of different haplotypes between populations. It is in such a context that this study has been undertaken. Our objective is then to contribute to the knowledge of the genetic diversity of P. xylostella populations in Senegal. To hit the target, PCR- Sequencing method has been applied on samples from the five following localities: Diofior, Malika, Mboro, Santh Ndong, and Sebikotane. P. xylostella from Mboro is genetically different from the other populations. This fact could be due to a different way of using pesticides in this area vis-à-vis of the other localities. On the other hand, between populations of P. xylostella from Diofior, Malika, Santh Ndong, and Sebikotane, there is no significant genetic difference. In other respects, phylogenetic trees reveal the existence of two clades: one with individuals from Mboro and the other one with individuals from the other four localities. P. xylostella from Mboro distinguishes itself from other populations and then, can be regarded as a sub-population. Thus, the phylogenetic trees reveal the existence of two groups of P. xylostella in Senegal.