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Deciphering gastric inflammation-induced tumorigenesis through multi-omics data and AI methods 被引量:1
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作者 Qian Zhang mingran yang +3 位作者 Peng Zhang Bowen Wu Xiaosen Wei Shao Li 《Cancer Biology & Medicine》 SCIE CAS CSCD 2024年第4期312-330,共19页
Gastric cancer(GC), the fifth most common cancer globally, remains the leading cause of cancer deaths worldwide. Inflammation-induced tumorigenesis is the predominant process in GC development;therefore, systematic re... Gastric cancer(GC), the fifth most common cancer globally, remains the leading cause of cancer deaths worldwide. Inflammation-induced tumorigenesis is the predominant process in GC development;therefore, systematic research in this area should improve understanding of the biological mechanisms that initiate GC development and promote cancer hallmarks. Here, we summarize biological knowledge regarding gastric inflammation-induced tumorigenesis, and characterize the multi-omics data and systems biology methods for investigating GC development. Of note, we highlight pioneering studies in multi-omics data and state-of-the-art network-based algorithms used for dissecting the features of gastric inflammation-induced tumorigenesis, and we propose translational applications in early GC warning biomarkers and precise treatment strategies. This review offers integrative insights for GC research, with the goal of paving the way to novel paradigms for GC precision oncology and prevention. 展开更多
关键词 Gastric cancer inflammation-induced tumorigenesis multi-omics artificial intelligence network-based methods
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Tongue coating microbiome as a potential biomarker for gastritis including precancerous cascade 被引量:28
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作者 Jiaxing Cui Hongfei Cui +6 位作者 mingran yang Shiyu Du Junfeng Li Yingxue Li Liyang Liu Xuegong Zhang Shao Li 《Protein & Cell》 SCIE CAS CSCD 2019年第7期496-509,共14页
The development of gastritis is associated with an increased risk of gastric cancer. Current invasive gastritis diagnostic methods are not suitable for monitoring progressIn this work based on 78 gastritis patients an... The development of gastritis is associated with an increased risk of gastric cancer. Current invasive gastritis diagnostic methods are not suitable for monitoring progressIn this work based on 78 gastritis patients and 50 healthy individuals, we observed that the variation of tongue-coating microbiota was associated with the occurrenee and development of gastritis. Twenty-one microbial species were identified for differentiating tongue-coating microbiomes of gastritis and healthy individuals. Pathways such as microbial metabolism in diverse environments, biosynthesis of antibiotics and bacterial chemotaxis were up-regulated in gastritis patients. The abundance of Campylobacter concisus was found associated with the gastric precancerous cascade. Furthermore, Campylobacter concisus could be detected in tongue coating and gastric fluid in a validation cohort containing 38 gastritis patients. These observations provided biological evidence of tongue diagnosis in traditional Chinese medicine, and indicated that tongue-coating microbiome could be a potential non-invasive biomarker, which might be suitable for long-term monitoring of gastritis. 展开更多
关键词 GASTRITIS tongue coating METAGENOMICS CAMPYLOBACTER concisus non-invasive BIOMARKER
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