In coffee breeding practice, two quantitative traits, namely cherry and green bean characters are the important phenotypic selection index. The synchronous of cherry maturation, size, weight and shape of green bean ar...In coffee breeding practice, two quantitative traits, namely cherry and green bean characters are the important phenotypic selection index. The synchronous of cherry maturation, size, weight and shape of green bean are desirable traits for the future breeding. In order to increase the breeding efficiency, a set of quantitative trait loci （QTLs） analysis controlling these traits was carried out. The QTL analysis was performanced in cross pollinated population of Coffea canephora using single nucleotide polymorphisms （SNPs） and simple sequence repeats （SSRs） markers. Totally 12 QTLs determined desirable cherry and green bean traits were identified on 9 linkage groups （LG）, where these QTLs mapped forming clusters in 11 different chromosomal regions. The desirable traits which can be detected by their QTLs are synchronous of cherry maturation （LG B and LG G）, cherry size （LG A, LG F and LG G）, bean shape （LG B, LG D and LG J）, bean weight （LG H）, bean size （LG A and LG E） and cherry-bean size （LG K） The gene action of these QTLs was dominance or an interaction of alleles （epistasis between alleles at the studied locus） effect. The yielded linkage map and the detected QTL can provide a tool for further genetic analysis of two traits and be potential for maker-assisted selection in C. canephora breeding.展开更多
文摘In coffee breeding practice, two quantitative traits, namely cherry and green bean characters are the important phenotypic selection index. The synchronous of cherry maturation, size, weight and shape of green bean are desirable traits for the future breeding. In order to increase the breeding efficiency, a set of quantitative trait loci （QTLs） analysis controlling these traits was carried out. The QTL analysis was performanced in cross pollinated population of Coffea canephora using single nucleotide polymorphisms （SNPs） and simple sequence repeats （SSRs） markers. Totally 12 QTLs determined desirable cherry and green bean traits were identified on 9 linkage groups （LG）, where these QTLs mapped forming clusters in 11 different chromosomal regions. The desirable traits which can be detected by their QTLs are synchronous of cherry maturation （LG B and LG G）, cherry size （LG A, LG F and LG G）, bean shape （LG B, LG D and LG J）, bean weight （LG H）, bean size （LG A and LG E） and cherry-bean size （LG K） The gene action of these QTLs was dominance or an interaction of alleles （epistasis between alleles at the studied locus） effect. The yielded linkage map and the detected QTL can provide a tool for further genetic analysis of two traits and be potential for maker-assisted selection in C. canephora breeding.
