Apple(Malus×domestica) has been proposed as an important woody plant and the major cultivated fruit trees in temperate regions. Apple whole genome sequencing has been completed, which provided an excellent oppo...Apple(Malus×domestica) has been proposed as an important woody plant and the major cultivated fruit trees in temperate regions. Apple whole genome sequencing has been completed, which provided an excellent opportunity for genome-wide analysis of the synonymous codon usage patterns. In this study, a multivariate bioinformatics analysis was performed to reveal the characteristics of synonymous codon usage and the main factors affecting codon bias in apple. The neutrality, correspondence, and correlation analyses were performed by Codon W and SPSS(Statistical Product and Service Solutions) programs, indicating that the apple genome codon usage patterns were affected by mutational pressure and selective constraint. Meanwhile, coding sequence length and the hydrophobicity of proteins could also influence the codon usage patterns. In short, codon usage pattern analysis and determination of optimal codons has laid an important theoretical basis for genetic engineering, gene prediction and molecular evolution studies in apple.展开更多
The effects of acetylsalicylic acid (ASA), CaCl2, and ASA + CaCl2 on the photosynthetic apparatus and antioxidant enzyme activities were investigated in chrysanthemum Jinba (a cut flower cultivar) under low tempe...The effects of acetylsalicylic acid (ASA), CaCl2, and ASA + CaCl2 on the photosynthetic apparatus and antioxidant enzyme activities were investigated in chrysanthemum Jinba (a cut flower cultivar) under low temperature stress with low light (TL stress) (16/12℃, day/night, PFD 100 μmol m^-2 s-1). The results showed that under TL stress, the net photosynthesis rate (Pn), carboxylation efficiency (CE), apparent quantum yield (AQY), maximal photochemical efficiency (Fv/Fm) of PSII, quantum yield of PSII electron transport (ФPSII), and photochemical quenching (qP) of the chrysanthemum leaves in all treatments were significantly decreased, but the decreases were alleviated by ASA, CaCl2, and ASA + CaCl2 treatments compared with the controls. The alleviating effect of ASA + CaCI2 was better than either ASA or CaCl2 single treatment. Moreover, the ASA + CaCl2 treatment highly improved the chlorophyll content, relatively improved the number and size of chloroplast and starch grain in the leaves of chrysanthemum plants compared with ASA and CaCl2 treatments. It was indicated that ASA and/or CaCI2 could regulate the photosynthetic functions in the leaves of chrysanthemum plants to enhance the resistance against TL stress. On the other hand, reduction in relative conductance rate implied that ASA and/ or CaCl2 could protect from membrane injury in leaves of chrysanthemum plants. The activities of SOD, POD, and CAT in the treated leaves of chrysanthemum were increased as compared with the controls. It was suggested that ASA and/or CaCl2 had positive regulation effects on the defence enzyme activities in chrysanthemum leaves which could protect the photosynthetic apparatus to a certain degree under the TL stress. In brief, the treatment of ASA together with CaCl2 was better for chrysanthemum plants to adapt TL stress than single ASA or CaCl2 treatments.展开更多
It is very important to study eco-physiological processes of plants and to determine quantitative relations between accumulation, distribution of dry matter and environmental factors for regionalization, standardizati...It is very important to study eco-physiological processes of plants and to determine quantitative relations between accumulation, distribution of dry matter and environmental factors for regionalization, standardization and precision agriculture. Meanwhile, global changes, e.g., atmospheric CO2 concentration rising, global warming, and climate abnormity, have been effecting on agricultural productivity. This study provides a theoretical basis for predicting productive potentials and development trends in different agricultural regions. One-year-old black walnut (Juglans hindsii) seedlings were employed as subjects for setting up the dynamic models of dry matter accumulation and distribution, based on mechanistic models of photosynthesis, matter conservation and concentration gradient. Under optimum conditions of soil moisture and mineral nutrient, during the period of the canopy construction, the dry matter accumulation of the canopy conformed to logistic curves; but the accumulation of both total biornass and dry matter of stem-root could be divided into two phases: the first phase was exponential increase, the second was linear increase. The total biomass, dry matter of canopy and stem-root all presented a fluctuant increase, which was affected by the environmental factors. Ratio of daily increase of dry matter in the canopy and the steem-root (dWJdWs) was changeable along with growth periods and environmental factors. At the initial stage of the canopy forming, dW/dWs was larger, about 3.2 on average, which indicated that the photosynthetic product was mainly used to develop leaves; in the midterm, it was about 1.9, which indicated that the distribution of dry matter in the canopy and in the stem-root was relatively balanced; when the plant tended to stop growing, dWl/dWs decreased linearly, and the main distribution of dry matter moved to the roots.展开更多
Calcium (Ca) plays an important role in the metabolism of higher plants. Recently, research on Ca^2+ in plants has been focused especially at the cellular and molecular levels. Uptake, transport, and distribution a...Calcium (Ca) plays an important role in the metabolism of higher plants. Recently, research on Ca^2+ in plants has been focused especially at the cellular and molecular levels. Uptake, transport, and distribution are also very important for Ca to accomplish its function at the whole-plant level. In this experiment, one-year-old apple seedlings (M. hupehensis Rehd.) were investigated to determine the distribution of stored Ca, the different forms of Ca, and Ca^2+-ATPase activity after treatment with indole butyric acid (IBA). The results showed that the total Ca measured in mature leaves and Ca^2+- ATPase activity in tender leaves were higher compared with those in the control (CK). Calcium nitrate and calcium chloride (ALe-Ca) and calcium phosphate and calcium carbonate (HAC-Ca) decreased in both mature leaves and shoots, whereas water-soluble calcium (H2O-Ca), calcium pectate (NaCl-Ca), and calcium oxalate (HCl-Ca) increased. The percentage of active calcium, calcium pectate, and water-soluble calcium increased, whereas the percentage of calcium phosphate and calcium carbonate decreased. When treated with IBA, calcium fractions and percentage of the different forms of Ca was enhanced in 40 part per million (ppm) IBA compared with 20 ppm IBA and water. The results indicated that IBA increased the percentage of both active calcium (NaCl-Ca and H2O-Ca) in tender shoots and boosted the transportation of stored Ca in plants. IBA promoted Ca^2+-ATPase activity and Ca^2+ uptake in tender shoots of M. hupehensis. It can improve the total Ca contents and the relative percentage of Ca.展开更多
基金supported by the National Natural Science Foundation of China (31401822)
文摘Apple(Malus×domestica) has been proposed as an important woody plant and the major cultivated fruit trees in temperate regions. Apple whole genome sequencing has been completed, which provided an excellent opportunity for genome-wide analysis of the synonymous codon usage patterns. In this study, a multivariate bioinformatics analysis was performed to reveal the characteristics of synonymous codon usage and the main factors affecting codon bias in apple. The neutrality, correspondence, and correlation analyses were performed by Codon W and SPSS(Statistical Product and Service Solutions) programs, indicating that the apple genome codon usage patterns were affected by mutational pressure and selective constraint. Meanwhile, coding sequence length and the hydrophobicity of proteins could also influence the codon usage patterns. In short, codon usage pattern analysis and determination of optimal codons has laid an important theoretical basis for genetic engineering, gene prediction and molecular evolution studies in apple.
基金supported by the National Key Tech-nologies R&D Program of China during the 11th Five-Year-Plan period (2006BAD10B07)the Project for Returned Overseas Atudents to Start Research from Ministry of Education,China (33206)
文摘The effects of acetylsalicylic acid (ASA), CaCl2, and ASA + CaCl2 on the photosynthetic apparatus and antioxidant enzyme activities were investigated in chrysanthemum Jinba (a cut flower cultivar) under low temperature stress with low light (TL stress) (16/12℃, day/night, PFD 100 μmol m^-2 s-1). The results showed that under TL stress, the net photosynthesis rate (Pn), carboxylation efficiency (CE), apparent quantum yield (AQY), maximal photochemical efficiency (Fv/Fm) of PSII, quantum yield of PSII electron transport (ФPSII), and photochemical quenching (qP) of the chrysanthemum leaves in all treatments were significantly decreased, but the decreases were alleviated by ASA, CaCl2, and ASA + CaCl2 treatments compared with the controls. The alleviating effect of ASA + CaCI2 was better than either ASA or CaCl2 single treatment. Moreover, the ASA + CaCl2 treatment highly improved the chlorophyll content, relatively improved the number and size of chloroplast and starch grain in the leaves of chrysanthemum plants compared with ASA and CaCl2 treatments. It was indicated that ASA and/or CaCI2 could regulate the photosynthetic functions in the leaves of chrysanthemum plants to enhance the resistance against TL stress. On the other hand, reduction in relative conductance rate implied that ASA and/ or CaCl2 could protect from membrane injury in leaves of chrysanthemum plants. The activities of SOD, POD, and CAT in the treated leaves of chrysanthemum were increased as compared with the controls. It was suggested that ASA and/or CaCl2 had positive regulation effects on the defence enzyme activities in chrysanthemum leaves which could protect the photosynthetic apparatus to a certain degree under the TL stress. In brief, the treatment of ASA together with CaCl2 was better for chrysanthemum plants to adapt TL stress than single ASA or CaCl2 treatments.
基金funded by the Superior Cultivars Program of Shandong Province Government and Open Foundation Program of Chinese Academy of Sciences,China
文摘It is very important to study eco-physiological processes of plants and to determine quantitative relations between accumulation, distribution of dry matter and environmental factors for regionalization, standardization and precision agriculture. Meanwhile, global changes, e.g., atmospheric CO2 concentration rising, global warming, and climate abnormity, have been effecting on agricultural productivity. This study provides a theoretical basis for predicting productive potentials and development trends in different agricultural regions. One-year-old black walnut (Juglans hindsii) seedlings were employed as subjects for setting up the dynamic models of dry matter accumulation and distribution, based on mechanistic models of photosynthesis, matter conservation and concentration gradient. Under optimum conditions of soil moisture and mineral nutrient, during the period of the canopy construction, the dry matter accumulation of the canopy conformed to logistic curves; but the accumulation of both total biornass and dry matter of stem-root could be divided into two phases: the first phase was exponential increase, the second was linear increase. The total biomass, dry matter of canopy and stem-root all presented a fluctuant increase, which was affected by the environmental factors. Ratio of daily increase of dry matter in the canopy and the steem-root (dWJdWs) was changeable along with growth periods and environmental factors. At the initial stage of the canopy forming, dW/dWs was larger, about 3.2 on average, which indicated that the photosynthetic product was mainly used to develop leaves; in the midterm, it was about 1.9, which indicated that the distribution of dry matter in the canopy and in the stem-root was relatively balanced; when the plant tended to stop growing, dWl/dWs decreased linearly, and the main distribution of dry matter moved to the roots.
基金The study was supported financially by the National Natural Science Foundation of China(30170655&30270923).
文摘Calcium (Ca) plays an important role in the metabolism of higher plants. Recently, research on Ca^2+ in plants has been focused especially at the cellular and molecular levels. Uptake, transport, and distribution are also very important for Ca to accomplish its function at the whole-plant level. In this experiment, one-year-old apple seedlings (M. hupehensis Rehd.) were investigated to determine the distribution of stored Ca, the different forms of Ca, and Ca^2+-ATPase activity after treatment with indole butyric acid (IBA). The results showed that the total Ca measured in mature leaves and Ca^2+- ATPase activity in tender leaves were higher compared with those in the control (CK). Calcium nitrate and calcium chloride (ALe-Ca) and calcium phosphate and calcium carbonate (HAC-Ca) decreased in both mature leaves and shoots, whereas water-soluble calcium (H2O-Ca), calcium pectate (NaCl-Ca), and calcium oxalate (HCl-Ca) increased. The percentage of active calcium, calcium pectate, and water-soluble calcium increased, whereas the percentage of calcium phosphate and calcium carbonate decreased. When treated with IBA, calcium fractions and percentage of the different forms of Ca was enhanced in 40 part per million (ppm) IBA compared with 20 ppm IBA and water. The results indicated that IBA increased the percentage of both active calcium (NaCl-Ca and H2O-Ca) in tender shoots and boosted the transportation of stored Ca in plants. IBA promoted Ca^2+-ATPase activity and Ca^2+ uptake in tender shoots of M. hupehensis. It can improve the total Ca contents and the relative percentage of Ca.