Leaf economics spectrum(LES)describes the fundamental trade-offs between leaf structural,chemical,and physiological investments.Generally,structurally robust thick leaves with high leaf dry mass per unit area(LMA)exhi...Leaf economics spectrum(LES)describes the fundamental trade-offs between leaf structural,chemical,and physiological investments.Generally,structurally robust thick leaves with high leaf dry mass per unit area(LMA)exhibit lower photosynthetic capacity per dry mass(Amass).Paradoxically,“soft and thinleaved”mosses and spikemosses have very low Amass,but due to minute-size foliage elements,their LMA and its components,leaf thickness(LT)and density(LD),have not been systematically estimated.Here,we characterized LES and associated traits in cryptogams in unprecedented details,covering five evolutionarily different lineages.We found that mosses and spikemosses had the lowest LMA and LT values ever measured for terrestrial plants.Across a broad range of species from different lineages,Amass and LD were negatively correlated.In contrast,Amass was only related to LMA when LMA was greater than 14 g cm^(-2).In fact,low Amass reflected high LD and cell wall thickness in the studied cryptogams.We conclude that evolutionarily old plant lineages attained poorly differentiated,ultrathin mesophyll by increasing LD.Across plant lineages,LD,not LMA,is the trait that represents the trade-off between leaf robustness and physiology in the LES.展开更多
Apricot has a long history of cultivation and has many varieties and types. The traditional variety identification methods are timeconsuming and labor-consuming, posing grand challenges to apricot resource management....Apricot has a long history of cultivation and has many varieties and types. The traditional variety identification methods are timeconsuming and labor-consuming, posing grand challenges to apricot resource management. Tool development in this regard will help researchers quickly identify variety information. This study photographed apricot fruits outdoors and indoors and constructed a dataset that can precisely classify the fruits using a U-net model (F-score:99%), which helps to obtain the fruit's size, shape, and color features. Meanwhile, a variety search engine was constructed, which can search and identify variety from the database according to the above features. Besides, a mobile and web application (ApricotView) was developed, and the construction mode can be also applied to other varieties of fruit trees.Additionally, we have collected four difficult-to-identify seed datasets and used the VGG16 model for training, with an accuracy of 97%, which provided an important basis for ApricotView. To address the difficulties in data collection bottlenecking apricot phenomics research, we developed the first apricot database platform of its kind (ApricotDIAP, http://apricotdiap.com/) to accumulate, manage, and publicize scientific data of apricot.展开更多
Siberian apricot(Prunus sibirica L.)is a traditional nut tree species in East Asia and Siberia and is a possible contribution to healthy diets.However,it has attracted little research attention and information on the ...Siberian apricot(Prunus sibirica L.)is a traditional nut tree species in East Asia and Siberia and is a possible contribution to healthy diets.However,it has attracted little research attention and information on the nutritional value of its kernel is limited.In this study,the profile,nutritional value and variation of amino acids were investigated in eight provenances.The kernels contained29×10-2 g/g protein and were rich in glutamic acid(26.5%),aspartic acid(11.3%)and arginine(10.1%).They showed higher essential amino acids(EAA)than similar protein values for almonds.The variation coefficients of amino acids ranged from 3.8 to 43.7%,and the levels of seven amino acids were significantly different among the eight provenances.The proportion of essential amino acids to total amino acids and amino acid score were also quite different.Protein was negatively correlated with some amino acids and protein quality values.In conclusion,there were two superior provenances(Wanjiagou and Horinger County)with high EAA contents and protein quality,and could be used in the large-scale development of this species.展开更多
Combined effects of ozone (O3) and cadmium (Cd) on growth and physiology of winter wheat (Triticum aestivum L. cv. JM22) were determined. Wheat plants were grown without or with Cd and exposed to charcoal-filter...Combined effects of ozone (O3) and cadmium (Cd) on growth and physiology of winter wheat (Triticum aestivum L. cv. JM22) were determined. Wheat plants were grown without or with Cd and exposed to charcoal-filtered air (〈 10 ppb O3) or elevated O3 (80 + 5 ppb, 7 hr/day) for 20 days. Results showed that O3 considerably depressed light saturated net photosynthetic rate (-20%), stomatal conductance (-33%), chlorophyll content (-33%), and total biomass (-29%) without Cd. The corresponding decreases were further enhanced by 45%, 56%, 60% and 59%, respectively with Cd, indicating a synergistic effect of O3 and Cd on wheat. Ozone significantly increased the activity of superoxide dismutase (46%), catalase (48%) and peroxidase (56%). However, great increases in malondialdehyde (MDA) content (2.55 folds) and intercellular CO2 concentration (1.13 folds) were noted in O3+Cd treatment compared to control. Our findings demonstrated that the increased anti-oxidative activities in wheat plants exposed to O3+Cd might not be enough to overcome the adverse effects of the combination of both pollutants as evidenced by further increase in MDA content, which is an important indicator of lipid peroxidation. Precise prediction model on O3 damages to crop should be conducted to ensure agricultural production security by considering environmental constraints in an agricultural system in peri-urban regions.展开更多
Increasing evidence indicates that long non- coding RNAs (IncRNAs) play pivotal roles in regulatory networks controlling plant and animal gene expression. However, IncRNA roles in regulating rubber biosynthesis in E...Increasing evidence indicates that long non- coding RNAs (IncRNAs) play pivotal roles in regulatory networks controlling plant and animal gene expression. However, IncRNA roles in regulating rubber biosynthesis in Eucommia ulmoides, an emerging source of natural rubber (Eu-rubber), are currently unknown. Here, we report on RNA deep-sequencing of E. ulmoides fruits at two developmental stages. Based on application of a stringent pipeline, 29,1o3 IncRNAs and 9,048 transcripts of uncertain coding potential (TUCPs) were identified.Two differentially expressed (DE)TUCPs appear to simultaneously regulate 12 protein-coding genes involved in Eu-rubber biosynthesis (GIEBs), as well as 95 DE genes. Functional categorization of these 95 DE genes indicated their involvement in subcellular microstructures and cellular processes, such as cell wall, cell division, and growth. These DE genes may participate in the differentiation and development of laticifers, where Eu-rubber is synthesized. A model is proposed in which "commanders" (DE TUCPs) direct the "builders" (DE genes) to construct a "storehouse" of materials needed for Eu-rubber synthesis, and the "workers" (GIEBs) to synthesize Eu-rubber. These findings provide insights into both cis- and trans-polyisoprene biosynthesis in plants, laying the foundation for additional studies of this crucial process.展开更多
基金funded by the EU Regional Development Fund within the framework of the Centre of Excellence EcolChange(2014-2020.4.01.15-0002),the European Commission through the European Research Council(advanced grant 322603,SIPVOL+),the Estonian Research Council(personal grant PSG884)base funding nr 190200,the National Natural Science foundation of China(31711530648)+2 种基金the Personnel Startup Project of the Scientific Research and Development Foundation of Zhejiang A&F University(2021FR041)the study was partly purchased from funding by the EU Regional Development Fund(AnaEE Estonia,2014-2020.4.01.20-0285,and the project“Plant Biology Infrastructure-TAIM”,2014-2020.4.01.20-0282)the Estonian Research Council(“Plant Biology Infrastructure-TAIM”,TT5).
文摘Leaf economics spectrum(LES)describes the fundamental trade-offs between leaf structural,chemical,and physiological investments.Generally,structurally robust thick leaves with high leaf dry mass per unit area(LMA)exhibit lower photosynthetic capacity per dry mass(Amass).Paradoxically,“soft and thinleaved”mosses and spikemosses have very low Amass,but due to minute-size foliage elements,their LMA and its components,leaf thickness(LT)and density(LD),have not been systematically estimated.Here,we characterized LES and associated traits in cryptogams in unprecedented details,covering five evolutionarily different lineages.We found that mosses and spikemosses had the lowest LMA and LT values ever measured for terrestrial plants.Across a broad range of species from different lineages,Amass and LD were negatively correlated.In contrast,Amass was only related to LMA when LMA was greater than 14 g cm^(-2).In fact,low Amass reflected high LD and cell wall thickness in the studied cryptogams.We conclude that evolutionarily old plant lineages attained poorly differentiated,ultrathin mesophyll by increasing LD.Across plant lineages,LD,not LMA,is the trait that represents the trade-off between leaf robustness and physiology in the LES.
基金supported by the Fundamental Research Funds for the Central Non-profit Research Institution of the Chinese Academy of Forestry (Grant No.CAFYBB2020ZY003)the Key S&T Project of Inner Mongolia (Grant No.2021ZD0041-001-002)the Central Public-interest Scientific Institution Basal Research Fund (Grant No.11024316000202300001)。
文摘Apricot has a long history of cultivation and has many varieties and types. The traditional variety identification methods are timeconsuming and labor-consuming, posing grand challenges to apricot resource management. Tool development in this regard will help researchers quickly identify variety information. This study photographed apricot fruits outdoors and indoors and constructed a dataset that can precisely classify the fruits using a U-net model (F-score:99%), which helps to obtain the fruit's size, shape, and color features. Meanwhile, a variety search engine was constructed, which can search and identify variety from the database according to the above features. Besides, a mobile and web application (ApricotView) was developed, and the construction mode can be also applied to other varieties of fruit trees.Additionally, we have collected four difficult-to-identify seed datasets and used the VGG16 model for training, with an accuracy of 97%, which provided an important basis for ApricotView. To address the difficulties in data collection bottlenecking apricot phenomics research, we developed the first apricot database platform of its kind (ApricotDIAP, http://apricotdiap.com/) to accumulate, manage, and publicize scientific data of apricot.
基金This study is supported by Fundamental Research Funds for the Central Non-profit Research Institution of Chinese Academy of Forestry (CAFYBB2017ZA004-4)
文摘Siberian apricot(Prunus sibirica L.)is a traditional nut tree species in East Asia and Siberia and is a possible contribution to healthy diets.However,it has attracted little research attention and information on the nutritional value of its kernel is limited.In this study,the profile,nutritional value and variation of amino acids were investigated in eight provenances.The kernels contained29×10-2 g/g protein and were rich in glutamic acid(26.5%),aspartic acid(11.3%)and arginine(10.1%).They showed higher essential amino acids(EAA)than similar protein values for almonds.The variation coefficients of amino acids ranged from 3.8 to 43.7%,and the levels of seven amino acids were significantly different among the eight provenances.The proportion of essential amino acids to total amino acids and amino acid score were also quite different.Protein was negatively correlated with some amino acids and protein quality values.In conclusion,there were two superior provenances(Wanjiagou and Horinger County)with high EAA contents and protein quality,and could be used in the large-scale development of this species.
基金supported by the Innovative Group Grant of Natural Science Foundation of China(No.30521002)the Project of Tai’shan Scholarship of Shandong Province of China(No. 00523902)
文摘Combined effects of ozone (O3) and cadmium (Cd) on growth and physiology of winter wheat (Triticum aestivum L. cv. JM22) were determined. Wheat plants were grown without or with Cd and exposed to charcoal-filtered air (〈 10 ppb O3) or elevated O3 (80 + 5 ppb, 7 hr/day) for 20 days. Results showed that O3 considerably depressed light saturated net photosynthetic rate (-20%), stomatal conductance (-33%), chlorophyll content (-33%), and total biomass (-29%) without Cd. The corresponding decreases were further enhanced by 45%, 56%, 60% and 59%, respectively with Cd, indicating a synergistic effect of O3 and Cd on wheat. Ozone significantly increased the activity of superoxide dismutase (46%), catalase (48%) and peroxidase (56%). However, great increases in malondialdehyde (MDA) content (2.55 folds) and intercellular CO2 concentration (1.13 folds) were noted in O3+Cd treatment compared to control. Our findings demonstrated that the increased anti-oxidative activities in wheat plants exposed to O3+Cd might not be enough to overcome the adverse effects of the combination of both pollutants as evidenced by further increase in MDA content, which is an important indicator of lipid peroxidation. Precise prediction model on O3 damages to crop should be conducted to ensure agricultural production security by considering environmental constraints in an agricultural system in peri-urban regions.
基金supported by the National Key R&D Program of China(2017YFD0600700)
文摘Increasing evidence indicates that long non- coding RNAs (IncRNAs) play pivotal roles in regulatory networks controlling plant and animal gene expression. However, IncRNA roles in regulating rubber biosynthesis in Eucommia ulmoides, an emerging source of natural rubber (Eu-rubber), are currently unknown. Here, we report on RNA deep-sequencing of E. ulmoides fruits at two developmental stages. Based on application of a stringent pipeline, 29,1o3 IncRNAs and 9,048 transcripts of uncertain coding potential (TUCPs) were identified.Two differentially expressed (DE)TUCPs appear to simultaneously regulate 12 protein-coding genes involved in Eu-rubber biosynthesis (GIEBs), as well as 95 DE genes. Functional categorization of these 95 DE genes indicated their involvement in subcellular microstructures and cellular processes, such as cell wall, cell division, and growth. These DE genes may participate in the differentiation and development of laticifers, where Eu-rubber is synthesized. A model is proposed in which "commanders" (DE TUCPs) direct the "builders" (DE genes) to construct a "storehouse" of materials needed for Eu-rubber synthesis, and the "workers" (GIEBs) to synthesize Eu-rubber. These findings provide insights into both cis- and trans-polyisoprene biosynthesis in plants, laying the foundation for additional studies of this crucial process.