Research on the solar magnetic field and its effects on solar dynamo mechanisms and space weather events has benefited from the continual improvements in instrument resolution and measurement frequency.The augmentatio...Research on the solar magnetic field and its effects on solar dynamo mechanisms and space weather events has benefited from the continual improvements in instrument resolution and measurement frequency.The augmentation and assimilation of historical observational data timelines also play a significant role in understanding the patterns of solar magnetic field variation.Within the realm of astronomical data processing,super-resolution(SR)reconstruction refers to the process of using a substantial corpus of training data to learn the nonlinear mapping between low-resolution(LR)and high-resolution(HR)images,thereby achieving higherresolution astronomical images.This paper is an application study in high-dimensional nonlinear regression.Deep learning models were employed to perform SR modeling on SOHO/MDI magnetograms and SDO/HMI magnetograms,thus reliably achieving resolution enhancement of full-disk SOHO/MDI magnetograms and enhancing the image resolution to obtain more detailed information.For this study,a data set comprising 9717pairs of data from 2010 April to 2011 February was used as the training set,1332 pairs from 2011 March were used as the validation set and 1034 pairs from 2011 April were used as the test set.After data preprocessing,we randomly cropped 128×128 sub-images as the LR cases from the full-disk MDI magnetograms,and the corresponding 512×512 sub-images as HR ones from the HMI full-disk magnetograms for model training.The tests conducted have shown that the study successfully produced reliable 4×SR reconstruction of full-disk MDI magnetograms.The MESR model's results(0.911)were highly correlated with the target HMI magnetographs as indicated by the correlation coefficient values.Furthermore,the method achieved the best PSNR,SSIM,MAE and RMSE values,indicating that the MESR model can effectively reconstruct magnetograms.展开更多
The Lijiang 2.4-meter Telescope(LJT), the largest common-purpose optical telescope in China,has been available to the worldwide astronomical community since 2008. It is located at the Gaomeigu site,Lijiang Observatory...The Lijiang 2.4-meter Telescope(LJT), the largest common-purpose optical telescope in China,has been available to the worldwide astronomical community since 2008. It is located at the Gaomeigu site,Lijiang Observatory(LJO), in the southwest of China. The site has very good observational conditions.During its 10-year operation, several instruments have been equipped on the LJT. Astronomers can perform both photometric and spectral observations. The main scientific goals of LJT include recording photometric and spectral evolution of supernovae, reverberation mapping of active galactic nuclei, investigating the physical properties of binary stars and near-earth objects(comets and asteroids), and identification of exoplanets and all kinds of transients. Until now, the masses of 41 high accretion rate black holes have been measured, and more than 168 supernovae have been identified by the LJT. More than 190 papers related to the LJT have been published. In this paper, the general observation conditions of the Gaomeigu site is introduced at first. Then, the structure of the LJT is described in detail, including the optical, mechanical, motion and control system. The specification of all the instruments and some detailed parameters of the YFOSC is also presented. Finally, some important scientific results and future expectations are summarized.展开更多
AIM: To investigate the location alteration of Smad2 and Smad4 mRNAs in the liver during and after fibrogenesis in rats. METHODS: Eighty male Wistar rats weighing approximately 200 g each were used. The rat models o...AIM: To investigate the location alteration of Smad2 and Smad4 mRNAs in the liver during and after fibrogenesis in rats. METHODS: Eighty male Wistar rats weighing approximately 200 g each were used. The rat models of experimental hepatic fibrosis were established by injection with carbon tetrachloride (CCh), normal rats and rats were injected with olive oil and served as control groups. In situ hybridization(ISH) was used to detect the Smad2 and Smad4 mRNA in liver. RESULTS: In situ hybridization showed Smad2 and Smad4 mRNA expressions in the cytoplasm of hepatic stellate cells (HSC), fibroblasts and myofibroblasts around the central vein and hepatic sinus during and after fibrogenesis. Expression of Smad2, 4 mRNA was higher than that in normal and control rats. CONCLUSION: In the process of and after hepatic fibrosis formation, HSC, fibroblasts and myofibroblasts are the major cells that express Smad2 and Smad4. The more serious the hepatic fibrosis is in the injured liver, the higher the level of Smad2 and Smad4 gene expression is during and after fibrogenesis respectively.展开更多
Observing a telluric standard star for correcting the telluric absorption lines of spectrum will take a significant amount of precious telescope time,especially in the long-term spectral monitoring project.Beyond that...Observing a telluric standard star for correcting the telluric absorption lines of spectrum will take a significant amount of precious telescope time,especially in the long-term spectral monitoring project.Beyond that,it is difficult to select a suitable telluric standard star near in both time and airmass to the scientific object.In this paper,we present a method of correcting the telluric absorption lines by combining the advantages of long slit spectroscopy.By rotating the slit,we observed the scientific object and a nearby comparison star in one exposure,so that the spectra of both objects should have the same telluric transmission spectrum.The telluric transmission spectrum was constructed by dividing the observed spectrum of the comparison star by its stellar template,and was used to correct the telluric absorption lines of the scientific object.Using the long slit spectrograph of the Lijiang 2.4-meter telescope,we designed a long-term spectroscopic observation strategy,and finished a four-year spectroscopic monitoring for a pair of objects(an active galactic nucleus and a non-varying comparison star).We applied this method to correct the telluric absorption lines of the long-term monitored spectra by the Lijiang 2.4-meter telescope,and investigated the variation of the telluric absorptions at Lijiang Observatory.We found that the telluric absorption transparency is mainly modulated by the seasonal variability of the relative humidity,airmass and seeing.Using the scatter of the [O Ⅲ] λ5007 fluxes emitted from the narrow-line region of active galactic nuclei as an indicator,we found that the correction accuracy of the telluric absorption lines is 1%.展开更多
Polarimetry plays an important role in investigating physical properties for celestial objects. We present a polarimeter named YFPOL for the Cassegrain focus of the Lijiang 2.4 m Telescope(LJT) of Yunnan Observatories...Polarimetry plays an important role in investigating physical properties for celestial objects. We present a polarimeter named YFPOL for the Cassegrain focus of the Lijiang 2.4 m Telescope(LJT) of Yunnan Observatories, Chinese Academy of Sciences. YFPOL is a traditional single-beam polarimeter with a rotating polarizer. As the focal-reducer instrument Yunnan Faint Object Spectrograph and Camera(YFOSC) is always positioned on the Cassegrain focal plane of LJT, we develop two sets of ultra-thin(thickness <12 mm) polarizer rotation control systems with wireless charging and control functions, which are suitable for mounting on the two front-wheels of YFOSC. One set is used as the polarimetric calibration unit, and the other is for the polarimetric modulation unit. Both of the polarizers have an ultra-high contrast ratio of 1,000,000:1 in the optical band. We investigate the instrumental polarization characteristics(IPCs) in the full field of view that is transferred from YFOSC. Furthermore, we identify that the IPCs change when the Cassegrain axis rotates. The spurious polarization from the IPCs can be effectively minimized by flat-fielding using the unpolarized domeflat, when the Cassegrain rotation angle is the same or nearest to that of the polarization observation. We develop a quasiautomatic pipeline for YFPOL and its effectiveness has been verified by tests of the polarimetric observation with blazar S5 0716+714. The calibration is performed by observing the zero-polarized and highly-polarized standard stars. We successfully reach high precision polarization in the 7’ field of view, and the systematic uncertainty is below 0.8% for a V = 11.68 target with a 10 s exposure. The instrument polarization angle offset is 2°. 6. YFPOL is not only a simple polarimeter, but also a spectropolarimeter with grisms that can be considered in the future.展开更多
In 2016,an exposure meter was installed on the Lijiang Fiber-fed High-Resolution Spectrograph to monitor the coupling of starlight to the science fiber during observations.Based on it,we investigated a method to estim...In 2016,an exposure meter was installed on the Lijiang Fiber-fed High-Resolution Spectrograph to monitor the coupling of starlight to the science fiber during observations.Based on it,we investigated a method to estimate the exposure flux of the CCD in real time by using the counts of the photomultiplier tubes(PMT)of the exposure meter,and developed a piece of software to optimize the control of the exposure time.First,by using flat-field lamp observations,we determined that there is a linear and proportional relationship between the total counts of the PMT and the exposure flux of the CCD.Second,using historical observations of different spectral types,the corresponding relational conversion factors were determined and obtained separately.Third,the method was validated using actual observation data,which showed that all values of the coefficient of determination were greater than 0.92.Finally,software was developed to display the counts of the PMT and the estimated exposure flux of the CCD in real-time during the observation,providing a visual reference for optimizing the exposure time control.展开更多
Allele frequencies for 15 short tandem repeat (STR) loci (D8S1179, D21S11, D7S820, CSFIPO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818, and FGA) were obtained from 7,636 unrelated ...Allele frequencies for 15 short tandem repeat (STR) loci (D8S1179, D21S11, D7S820, CSFIPO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818, and FGA) were obtained from 7,636 unrelated individuals of Chinese Han population living in Qinghai and Chongqing, China. Totally 206 alleles were observed, with the corresponding allele frequencies ranging from 0.0001-0.4982. Chi-square test showed that all of the STR loci agreed with the Hardy-Weinberg equilibrium. We also compared our data with previously published population data of other ethnics or areas. The results are valuable for human identification and paternity testing in Chinese Han population.展开更多
Based on a hydrothermal method, the Ce3+/Tb3+ co-doped Ba Gd F5 nanocrystals were synthesized by controlling the introduction concentration of Ba2+ and Gd3+. The samples were characterized by X-ray diffraction(XRD), f...Based on a hydrothermal method, the Ce3+/Tb3+ co-doped Ba Gd F5 nanocrystals were synthesized by controlling the introduction concentration of Ba2+ and Gd3+. The samples were characterized by X-ray diffraction(XRD), field emission scanning electron microscopy(FESEM) images, photoluminescence(PL) excitation, and emission spectra, as well as the photoluminescence dynamic decay curves. With the increase of the Ba2+ concentration in the synthesis procedure, the positions of diffraction peaks of XRD patterns move toward lower degree, and the case of the samples synthesized with the increase of the Gd3+ concentration is contrary, which consists well with each other. The FE-SEM images suggest that the BaGdF5 nanocrystals are in spherical morphology,and the average diameters decrease with the increase of Ba2+ or Gd3+ concentration. For the 4f–5d transition of Ce3+ is sensitive to the environment of local lattice, the PL excitation and emission spectra of the samples are different. The 4f–4f transition of Tb3+ also presents different optical properties in different host lattices. The variations of the optical properties of Ce3+ and Tb3+ as well as the lifetime of the 5D4+7F5 emission of Tb3+ are also consistent well with each other in the two series of samples.展开更多
The 2004 Southeast Asia Tsunami killed nearly 5,400 people in Southern Thailand, including foreign tourists and local residents. To recover DNA evidence as much as possible from the seriously decomposed bodies, we exp...The 2004 Southeast Asia Tsunami killed nearly 5,400 people in Southern Thailand, including foreign tourists and local residents. To recover DNA evidence as much as possible from the seriously decomposed bodies, we explored procedures of sample preparation from both bone and tooth samples as well as both mitochondrial and nuclear markers. Despite having failed to recover enough DNA for nuclear marker typing, we succeeded in obtaining fully informative results for mitochondrial markers (HV1 and HV2) from 258 tooth samples with a success rate of 51% (258/507). Using an organic DNA extraction method coupled with an ultrafiltration step, we obtained 16 STR (including 13 CODIS loci, one sex discrimination locus, and two Identifiler loci) profiles for 834 samples with a success rate of 79% (834/1,062). In addition, by comparing the allelic frequencies between the typed samples as a group and other index populations, we conclude that the Thai tsunami victims are a combined group of several populations. Our results provide valuable evidence and protocols for the future forensic practice.展开更多
The red palm weevil (RPW; Rhynchophorusferrugineus) is a devastating pest of palms, prevalent in the Middle East as well as many other regions of the world. Here, we report a large-scale de novo complementary DNA (...The red palm weevil (RPW; Rhynchophorusferrugineus) is a devastating pest of palms, prevalent in the Middle East as well as many other regions of the world. Here, we report a large-scale de novo complementary DNA (cDNA) sequencing effort that acquired ~5 million reads and assembled them into 26 765 contigs from 12 libraries made from samples of different RPW developmental stages based on the Roche/454 GS FLX platform. We annotated these contigs based on the publically available known insect genes and the Tribolium castaneum genome assembly. We find that over 80% of coding sequences (CDS) from the RPW contigs have high-identity homologs to known proteins with complete CDS. Gene expression analysis shows that the pupa and larval stages have the highest and lowest expression levels, respectively. In addition, we also identified more than 60 000 single nucleotide polymorphisms and 1 200 simple sequence repeat markers. This study provides the first large-scale eDNA dataset for RPW, a much-needed resource for future molecular studies.展开更多
基金funded by the National Natural Science Foundation of China(NSFC,Grant No.12003068)Yunnan Key Laboratory of Solar Physics and Space Science under the number 202205AG070009。
文摘Research on the solar magnetic field and its effects on solar dynamo mechanisms and space weather events has benefited from the continual improvements in instrument resolution and measurement frequency.The augmentation and assimilation of historical observational data timelines also play a significant role in understanding the patterns of solar magnetic field variation.Within the realm of astronomical data processing,super-resolution(SR)reconstruction refers to the process of using a substantial corpus of training data to learn the nonlinear mapping between low-resolution(LR)and high-resolution(HR)images,thereby achieving higherresolution astronomical images.This paper is an application study in high-dimensional nonlinear regression.Deep learning models were employed to perform SR modeling on SOHO/MDI magnetograms and SDO/HMI magnetograms,thus reliably achieving resolution enhancement of full-disk SOHO/MDI magnetograms and enhancing the image resolution to obtain more detailed information.For this study,a data set comprising 9717pairs of data from 2010 April to 2011 February was used as the training set,1332 pairs from 2011 March were used as the validation set and 1034 pairs from 2011 April were used as the test set.After data preprocessing,we randomly cropped 128×128 sub-images as the LR cases from the full-disk MDI magnetograms,and the corresponding 512×512 sub-images as HR ones from the HMI full-disk magnetograms for model training.The tests conducted have shown that the study successfully produced reliable 4×SR reconstruction of full-disk MDI magnetograms.The MESR model's results(0.911)were highly correlated with the target HMI magnetographs as indicated by the correlation coefficient values.Furthermore,the method achieved the best PSNR,SSIM,MAE and RMSE values,indicating that the MESR model can effectively reconstruct magnetograms.
基金supported by the Joint Research Fund in Astronomy (U1631127, U1631129 and U1831204) under cooperative agreement between the National Natural Science Foundation of China (NSFC) and Chinese Academy of Sciences (CAS)the National Natural Science Foundation of China (NSFC) (11473068, 11603072 and 11573067)+1 种基金the National Key R&D Program of China (2018YFA0404603)supported by the Key Laboratory for the Structure and Evolution of Celestial Objects, Chinese Academy of Sciences (CAS)
文摘The Lijiang 2.4-meter Telescope(LJT), the largest common-purpose optical telescope in China,has been available to the worldwide astronomical community since 2008. It is located at the Gaomeigu site,Lijiang Observatory(LJO), in the southwest of China. The site has very good observational conditions.During its 10-year operation, several instruments have been equipped on the LJT. Astronomers can perform both photometric and spectral observations. The main scientific goals of LJT include recording photometric and spectral evolution of supernovae, reverberation mapping of active galactic nuclei, investigating the physical properties of binary stars and near-earth objects(comets and asteroids), and identification of exoplanets and all kinds of transients. Until now, the masses of 41 high accretion rate black holes have been measured, and more than 168 supernovae have been identified by the LJT. More than 190 papers related to the LJT have been published. In this paper, the general observation conditions of the Gaomeigu site is introduced at first. Then, the structure of the LJT is described in detail, including the optical, mechanical, motion and control system. The specification of all the instruments and some detailed parameters of the YFOSC is also presented. Finally, some important scientific results and future expectations are summarized.
基金Supported by the Research Foundation of Department of Education of Heilongjiang Province, No.10551131
文摘AIM: To investigate the location alteration of Smad2 and Smad4 mRNAs in the liver during and after fibrogenesis in rats. METHODS: Eighty male Wistar rats weighing approximately 200 g each were used. The rat models of experimental hepatic fibrosis were established by injection with carbon tetrachloride (CCh), normal rats and rats were injected with olive oil and served as control groups. In situ hybridization(ISH) was used to detect the Smad2 and Smad4 mRNA in liver. RESULTS: In situ hybridization showed Smad2 and Smad4 mRNA expressions in the cytoplasm of hepatic stellate cells (HSC), fibroblasts and myofibroblasts around the central vein and hepatic sinus during and after fibrogenesis. Expression of Smad2, 4 mRNA was higher than that in normal and control rats. CONCLUSION: In the process of and after hepatic fibrosis formation, HSC, fibroblasts and myofibroblasts are the major cells that express Smad2 and Smad4. The more serious the hepatic fibrosis is in the injured liver, the higher the level of Smad2 and Smad4 gene expression is during and after fibrogenesis respectively.
基金supported by the National Natural Science Foundation of China(NSFCGrant Nos.11991051,12073068,11703077,and 11803087)+2 种基金financial support from the Yunnan Province Foundation(202001AT070069)the Light of West China Program provided by Chinese Academy of Sciences(Y7XB016001)financial support from the Light of West China Program provided by Chinese Academy of Sciences(Y8XB018001)。
文摘Observing a telluric standard star for correcting the telluric absorption lines of spectrum will take a significant amount of precious telescope time,especially in the long-term spectral monitoring project.Beyond that,it is difficult to select a suitable telluric standard star near in both time and airmass to the scientific object.In this paper,we present a method of correcting the telluric absorption lines by combining the advantages of long slit spectroscopy.By rotating the slit,we observed the scientific object and a nearby comparison star in one exposure,so that the spectra of both objects should have the same telluric transmission spectrum.The telluric transmission spectrum was constructed by dividing the observed spectrum of the comparison star by its stellar template,and was used to correct the telluric absorption lines of the scientific object.Using the long slit spectrograph of the Lijiang 2.4-meter telescope,we designed a long-term spectroscopic observation strategy,and finished a four-year spectroscopic monitoring for a pair of objects(an active galactic nucleus and a non-varying comparison star).We applied this method to correct the telluric absorption lines of the long-term monitored spectra by the Lijiang 2.4-meter telescope,and investigated the variation of the telluric absorptions at Lijiang Observatory.We found that the telluric absorption transparency is mainly modulated by the seasonal variability of the relative humidity,airmass and seeing.Using the scatter of the [O Ⅲ] λ5007 fluxes emitted from the narrow-line region of active galactic nuclei as an indicator,we found that the correction accuracy of the telluric absorption lines is 1%.
基金supported by the National Key R&D Program of China with No.2021YFA1600404the National Natural Science Foundation of China (NSFC, Grant Nos. 11991051, 11573067, 11673062,11527804, U1931206 and 11873091)+3 种基金the CAS “Light of West China” Programthe Yunnan Province Basic Research Plan with No. 2019FA001the China Manned Space Project with No. CMS-CSST-2021-A06funded by Yunnan Province,Chinese Academy of Sciences and NSFC。
文摘Polarimetry plays an important role in investigating physical properties for celestial objects. We present a polarimeter named YFPOL for the Cassegrain focus of the Lijiang 2.4 m Telescope(LJT) of Yunnan Observatories, Chinese Academy of Sciences. YFPOL is a traditional single-beam polarimeter with a rotating polarizer. As the focal-reducer instrument Yunnan Faint Object Spectrograph and Camera(YFOSC) is always positioned on the Cassegrain focal plane of LJT, we develop two sets of ultra-thin(thickness <12 mm) polarizer rotation control systems with wireless charging and control functions, which are suitable for mounting on the two front-wheels of YFOSC. One set is used as the polarimetric calibration unit, and the other is for the polarimetric modulation unit. Both of the polarizers have an ultra-high contrast ratio of 1,000,000:1 in the optical band. We investigate the instrumental polarization characteristics(IPCs) in the full field of view that is transferred from YFOSC. Furthermore, we identify that the IPCs change when the Cassegrain axis rotates. The spurious polarization from the IPCs can be effectively minimized by flat-fielding using the unpolarized domeflat, when the Cassegrain rotation angle is the same or nearest to that of the polarization observation. We develop a quasiautomatic pipeline for YFPOL and its effectiveness has been verified by tests of the polarimetric observation with blazar S5 0716+714. The calibration is performed by observing the zero-polarized and highly-polarized standard stars. We successfully reach high precision polarization in the 7’ field of view, and the systematic uncertainty is below 0.8% for a V = 11.68 target with a 10 s exposure. The instrument polarization angle offset is 2°. 6. YFPOL is not only a simple polarimeter, but also a spectropolarimeter with grisms that can be considered in the future.
基金funded by the National Natural Science Foundation of China(NSFC,Nos.11803088,12003068 and 12063002)Civil Aerospace preresearch project D020302+2 种基金the science research grants from the China Manned Space Project with NO.CMS-CSST-2021-B10Yunnan Science Foundation of China(202001AU070077)SinoGerman Scientist Mobility Programme M-0086。
文摘In 2016,an exposure meter was installed on the Lijiang Fiber-fed High-Resolution Spectrograph to monitor the coupling of starlight to the science fiber during observations.Based on it,we investigated a method to estimate the exposure flux of the CCD in real time by using the counts of the photomultiplier tubes(PMT)of the exposure meter,and developed a piece of software to optimize the control of the exposure time.First,by using flat-field lamp observations,we determined that there is a linear and proportional relationship between the total counts of the PMT and the exposure flux of the CCD.Second,using historical observations of different spectral types,the corresponding relational conversion factors were determined and obtained separately.Third,the method was validated using actual observation data,which showed that all values of the coefficient of determination were greater than 0.92.Finally,software was developed to display the counts of the PMT and the estimated exposure flux of the CCD in real-time during the observation,providing a visual reference for optimizing the exposure time control.
文摘Allele frequencies for 15 short tandem repeat (STR) loci (D8S1179, D21S11, D7S820, CSFIPO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818, and FGA) were obtained from 7,636 unrelated individuals of Chinese Han population living in Qinghai and Chongqing, China. Totally 206 alleles were observed, with the corresponding allele frequencies ranging from 0.0001-0.4982. Chi-square test showed that all of the STR loci agreed with the Hardy-Weinberg equilibrium. We also compared our data with previously published population data of other ethnics or areas. The results are valuable for human identification and paternity testing in Chinese Han population.
基金financially supported by the National Natural Science Foundation of China (No. 61205217)the National Science Foundation for Distinguished Young Scholars of Fujian Province (No. 2012J06024)+2 种基金the Natural Science Foundation of Fujian Province (No. 2011J05142)the Science and Technology Plan of Xiamen City (No. 3502Z20123040)the Ministry of Education in China Project of Humanities and Social Sciences (No. 11YJC820135)
文摘Based on a hydrothermal method, the Ce3+/Tb3+ co-doped Ba Gd F5 nanocrystals were synthesized by controlling the introduction concentration of Ba2+ and Gd3+. The samples were characterized by X-ray diffraction(XRD), field emission scanning electron microscopy(FESEM) images, photoluminescence(PL) excitation, and emission spectra, as well as the photoluminescence dynamic decay curves. With the increase of the Ba2+ concentration in the synthesis procedure, the positions of diffraction peaks of XRD patterns move toward lower degree, and the case of the samples synthesized with the increase of the Gd3+ concentration is contrary, which consists well with each other. The FE-SEM images suggest that the BaGdF5 nanocrystals are in spherical morphology,and the average diameters decrease with the increase of Ba2+ or Gd3+ concentration. For the 4f–5d transition of Ce3+ is sensitive to the environment of local lattice, the PL excitation and emission spectra of the samples are different. The 4f–4f transition of Tb3+ also presents different optical properties in different host lattices. The variations of the optical properties of Ce3+ and Tb3+ as well as the lifetime of the 5D4+7F5 emission of Tb3+ are also consistent well with each other in the two series of samples.
文摘The 2004 Southeast Asia Tsunami killed nearly 5,400 people in Southern Thailand, including foreign tourists and local residents. To recover DNA evidence as much as possible from the seriously decomposed bodies, we explored procedures of sample preparation from both bone and tooth samples as well as both mitochondrial and nuclear markers. Despite having failed to recover enough DNA for nuclear marker typing, we succeeded in obtaining fully informative results for mitochondrial markers (HV1 and HV2) from 258 tooth samples with a success rate of 51% (258/507). Using an organic DNA extraction method coupled with an ultrafiltration step, we obtained 16 STR (including 13 CODIS loci, one sex discrimination locus, and two Identifiler loci) profiles for 834 samples with a success rate of 79% (834/1,062). In addition, by comparing the allelic frequencies between the typed samples as a group and other index populations, we conclude that the Thai tsunami victims are a combined group of several populations. Our results provide valuable evidence and protocols for the future forensic practice.
文摘The red palm weevil (RPW; Rhynchophorusferrugineus) is a devastating pest of palms, prevalent in the Middle East as well as many other regions of the world. Here, we report a large-scale de novo complementary DNA (cDNA) sequencing effort that acquired ~5 million reads and assembled them into 26 765 contigs from 12 libraries made from samples of different RPW developmental stages based on the Roche/454 GS FLX platform. We annotated these contigs based on the publically available known insect genes and the Tribolium castaneum genome assembly. We find that over 80% of coding sequences (CDS) from the RPW contigs have high-identity homologs to known proteins with complete CDS. Gene expression analysis shows that the pupa and larval stages have the highest and lowest expression levels, respectively. In addition, we also identified more than 60 000 single nucleotide polymorphisms and 1 200 simple sequence repeat markers. This study provides the first large-scale eDNA dataset for RPW, a much-needed resource for future molecular studies.