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Analysis of GC×GC fingerprints from medicinal materials using a novel contour detection algorithm:A case of Curcuma wenyujin
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作者 Xinyue Yang Yingyu Sima +2 位作者 Xuhuai Luo Yaping Li Min He 《Journal of Pharmaceutical Analysis》 SCIE CAS CSCD 2024年第4期542-551,共10页
This study introduces an innovative contour detection algorithm,PeakCET,designed for rapid and efficient analysis of natural product image fingerprints using comprehensive two-dimensional gas chromatogram(GC×GC).... This study introduces an innovative contour detection algorithm,PeakCET,designed for rapid and efficient analysis of natural product image fingerprints using comprehensive two-dimensional gas chromatogram(GC×GC).This method innovatively combines contour edge tracking with affinity propagation(AP)clustering for peak detection in GC×GC fingerprints,the first in this field.Contour edge tracking signif-icantly reduces false positives caused by“burr”signals,while AP clustering enhances detection accuracy in the face of false negatives.The efficacy of this approach is demonstrated using three medicinal products derived from Curcuma wenyujin.PeakCET not only performs contour detection but also employs inter-group peak matching and peak-volume percentage calculations to assess the compositional similarities and differences among various samples.Furthermore,this algorithm compares the GC×GC fingerprints of Radix/Rhizoma Curcumae Wenyujin with those of products from different botanical origins.The findings reveal that genetic and geographical factors influence the accumulation of secondary metabolites in various plant tissues.Each sample exhibits unique characteristic components alongside common ones,and vari-ations in content may influence their therapeutic effectiveness.This research establishes a foundational data-set for the quality assessment of Curcuma products and paves the way for the application of computer vision techniques in two-dimensional(2D)fingerprint analysis of GC×GC data. 展开更多
关键词 GC×GC Image fingerprints Contour detection Clustering of mass spectra Curcuma products
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UV,five wavelengths fusion and electrochemical fingerprints combined with antioxidant activity for quality control of antiviral mixture
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作者 Kaining Zhou Zini Tang +2 位作者 Guoxiang Sun Ping Guo Lili Lan 《Asian Journal of Traditional Medicines》 2024年第3期119-136,151,共19页
Aiming to ensure the consistency of quality control of Traditional Chinese Medicines(TCMs),a combination method of high-performance liquid chromatography(HPLC),ultraviolet(UV),electrochemical(EC)was developed in this ... Aiming to ensure the consistency of quality control of Traditional Chinese Medicines(TCMs),a combination method of high-performance liquid chromatography(HPLC),ultraviolet(UV),electrochemical(EC)was developed in this study to comprehensively evaluate the quality of Antiviral Mixture(AM),and Comprehensive Linear Quantification Fingerprint Method(CLQFM)was used to process the data.Quantitative analysis of three active substances in TCM was conducted.A fivewavelength fusion fingerprint(FWFF)was developed,using second-order derivatives of UV spectral data to differentiate sample levels effectively.The combination of HPLC and UV spectrophotometry,along with electrochemical fingerprinting(ECFP),successfully evaluated total active substances.Ultimately,a multidimensional profiling analytical system for TCM was developed. 展开更多
关键词 TCM antiviral mixture five-wavelength fusion fingerprint(FWFF) Comprehensive Linear Quantification Fingerprint Method(CLQFM) quantization fingerprint antioxidant activity profilling
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Volatile Compounds Fingerprints for White Duck down and White Goose down Determined by Gas Chromatography-Ion Mobility Spectrometry
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作者 Fei Wang Qihui Zhang +6 位作者 Yiwen Lin Wenjian Chen Hui Wang Kuntai Li Jihua Li Yuliang Chen Leiyu Wang 《Agricultural Sciences》 CAS 2023年第3期432-445,共14页
This work first describes a simple approach for the untargeted profiling of volatile compounds for distinguishing between white duck down (WDD) and white goose down (WGD) based on resolution-optimized GC-IMS combined ... This work first describes a simple approach for the untargeted profiling of volatile compounds for distinguishing between white duck down (WDD) and white goose down (WGD) based on resolution-optimized GC-IMS combined with optimized chemometric techniques, namely PCA. The detection method for down samples was established by using GC-IMS. Meanwhile, the reason of unpleasant odors caused by WDD was explained on the basis of the characteristic volatile compounds identification. GC-IMS fingerprinting can be considered a revolutionary approach for a truly fully automatable, cost-efficient, and in particular highly sensitive method. A total of 22 compounds were successfully separated and identified through GC-IMS method, and the significant differences in volatile compounds were observed in three parts of WDD and WGD samples. The most characteristic volatile compounds of WGD belong to aldehydes, whereas carboxylic acids from WDD were detected generated by autoxidation reaction. Meanwhile, the main reason of unpleasant odor generation was possibly attributed to the high concentration of volatile carboxylic acids of WDD. Therefore, the constructed model presents a simple and efficient method of analysis and serves as a basis for down processing and quality control. 展开更多
关键词 Gas Chromatography-Ion Mobility Spectrometry (GC-IMS) Principal Components Analysis (PCA) DOWN Characteristic Volatiles fingerprints Carboxylic Acids
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Study and Application of Fingerprints of Ginkgo biloba Leaves Preparations 被引量:3
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作者 徐亚萍 姚彤炜 《Journal of Chinese Pharmaceutical Sciences》 CAS 2005年第1期43-50,共8页
Aim To establish a method for determination of Ginkgo biloba L, its extractand preparations with HPLC fingerprints, so as to control the quality of the preparations. MethodsHPLC-DAD method was used to determine the co... Aim To establish a method for determination of Ginkgo biloba L, its extractand preparations with HPLC fingerprints, so as to control the quality of the preparations. MethodsHPLC-DAD method was used to determine the constituents in preparations. Diamonsil? C_(18) (200mm X 4.6 mm, 5 μm) was used as analytical column, and acetonitrile/KH_2PO_4 was used as mobilephase with gradient elu-tion. The column temperature was at 24 ℃. The HPLC profile of chemicalconstituents of control sample and preparations were analyzed using similarity software. Results Thefingerprints of different preparations from different companies were slightly different because ofthe different preparing procedures. Mean while, the fingerprints of different batches of the samepreparation from the same company were similar to each other and the technology of each preparationwas stable. Conclusion This method is accurate, reproducible , simple, and can be used as ananalytical method for the routine quality control of Ginkgo biloba preparations. 展开更多
关键词 ginkgo biloba high-performance liquid chromatography fingerprints SIMILARITY
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Nutritional Compositions of Maca Grown in Ebian and HPLC Fingerprints of Macaene and Macamide
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作者 陈建 夏陈 +1 位作者 朱永清 栢凤女 《Agricultural Science & Technology》 CAS 2016年第4期947-950,共4页
In the present study, the nutritional compositions of maca which was grown in a mountain area at an elevation of 2 200-2 800 m of Ebian County,Sichuan Province were measured, and then HPLC analysis on two representati... In the present study, the nutritional compositions of maca which was grown in a mountain area at an elevation of 2 200-2 800 m of Ebian County,Sichuan Province were measured, and then HPLC analysis on two representative active compounds(macaene and macamide) in the maca sample was performed.The results revealed that there were 24.20% total protein, 18.40% total amino acids(including 3.84% arginine), 42.80% total sugars, 1.36% fat and kinds of minerals(including 1.14% potassium) in Ebian maca. HPLC fingerprints of macaene and macamide of Ebian maca were similar to those of Peru maca. The results suggested that maca could be cultivated with good quality in some mountain areas with an altitude1 000 m lower than the origin place in Peru. 展开更多
关键词 MACA Nutritional compositions Macaene Macamide HPLC fingerprints
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Optimization of high pressure machine decocting process for Dachengqi Tang using HPLC fingerprints combined with the Box–Behnken experimental design 被引量:6
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作者 Rui-Fang Xie Zhi-Na Shi +3 位作者 Zhi-Cheng Li Pei-Pei Chen Yi-Min Li Xin Zhou 《Journal of Pharmaceutical Analysis》 SCIE CAS 2015年第2期110-119,共10页
Using Dachengqi Tang(DCQT) as a model, high performance liquid chromatography(HPLC)fingerprints were applied to optimize machine extracting process with the Box–Behnken experimental design. HPLC fingerprints were... Using Dachengqi Tang(DCQT) as a model, high performance liquid chromatography(HPLC)fingerprints were applied to optimize machine extracting process with the Box–Behnken experimental design. HPLC fingerprints were carried out to investigate the chemical ingredients of DCQT; synthetic weighing method based on analytic hierarchy process(AHP) and criteria importance through intercriteria correlation(CRITIC) was performed to calculate synthetic scores of fingerprints; using the mark ingredients contents and synthetic scores as indicators, the Box–Behnken design was carried out to optimize the process parameters of machine decocting process under high pressure for DCQT. Results of optimal process showed that the herb materials were soaked for 45 min and extracted with 9 folds volume of water in the decocting machine under the temperature of 140 1C till the pressure arrived at 0.25 MPa;then hot decoction was excreted to soak Dahuang and Mangxiao for 5 min. Finally, obtained solutions were mixed, filtrated and packed. It concluded that HPLC fingerprints combined with the Box–Behnken experimental design could be used to optimize extracting process of traditional Chinese medicine(TCM). 展开更多
关键词 Dachengqi Tang HPLC fingerprints Box–Behnken design Synthetic weighing method
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Construction of Gliadin Fingerprints Database for the Main Wheat Cultivars Grown in North China 被引量:1
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作者 LANG Ming-lin, LU Shao-yuan and ZHANG Rong-zhi( Department of Biology, Graduate School of CAS , Beijing 100039 College of Life Science , Hebei Agricultural University , Baoding 071001 ) 《Agricultural Sciences in China》 CAS CSCD 2002年第2期125-131,共7页
The standard gliadin fingerprints and their database of 68 major cultivars and a part of backbone parents, which have ever been extensively grown in North China since the 1950' s, were constructed by using CAWGES ... The standard gliadin fingerprints and their database of 68 major cultivars and a part of backbone parents, which have ever been extensively grown in North China since the 1950' s, were constructed by using CAWGES software and an improved method of pH 3.2 A-PAGE. In the meantime, investigations were made on the utilization of the database in the area of gliadin fingerprints analysis, variety identification and genetic relationship study. The results showed that it provided an effective method for building core collections and variety identification. 展开更多
关键词 Wheat Major cultivars GLIADIN A-PAGE fingerprints database
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Anti-Spoof Reliable Biometry of Fingerprints Using <i>En-Face</i>Optical Coherence Tomography 被引量:3
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作者 Mohammad-Reza Nasiri-Avanaki Alexander Meadway +3 位作者 Adrian Bradu Rohollah Mazrae Khoshki Ali Hojjatoleslami Adrian Gh. Podoleanu 《Optics and Photonics Journal》 2011年第3期91-96,共6页
Optical coherence tomography (OCT) is a relatively new imaging technology which can produce high resolution images of three-dimensional structures. OCT has been mainly used for medical applications such as for ophthal... Optical coherence tomography (OCT) is a relatively new imaging technology which can produce high resolution images of three-dimensional structures. OCT has been mainly used for medical applications such as for ophthalmology and dermatology. In this study we demonstrate its capability in providing much more reliable biometry identification of fingerprints than conventional methods. We prove that OCT can serve secure control of genuine fingerprints as it can detect if extra layers are placed above the finger. This can prevent with a high probability, intruders to a secure area trying to foul standard systems based on imaging the finger surface. En-Face OCT method is employed and recommended for its capability of providing not only the axial succession of layers in depth, but the en-face image that allows the traditional pattern identification. Another reason for using such OCT technology is that it is compatible with dynamic focus and therefore can provide enhanced transversal resolution and sensitivity. Two En-Face OCT systems are used to evaluate the need for high resolution and conclusions are drawn in terms of the most potential commercial route to ex- ploitation. 展开更多
关键词 Optical Coherence Tomography En-Face OCT fingerprints BIOMETRY High Resolution
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Correlation analysis between the HPLC fingerprints and in vitro antibacterial activity of ethyl acetate extracts from Radix isatidis
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作者 孔维军 赵艳玲 +2 位作者 山丽梅 肖小河 郭伟英 《Journal of Chinese Pharmaceutical Sciences》 CAS 2007年第4期282-287,共6页
Aim To study the correlation between the HPLC fingerprints and in vitro antibacterial activities of EtOAc extracts of Radix isatidis from various sources. Methods Ten batches of Radix isatidis EtOAc extracts were anal... Aim To study the correlation between the HPLC fingerprints and in vitro antibacterial activities of EtOAc extracts of Radix isatidis from various sources. Methods Ten batches of Radix isatidis EtOAc extracts were analyzed with HPLC and the fingerprints were established. The influence of EtOAc extracts on the thermogenic curve of growth of Escherchia coli was obtained by microcalorimetry. The chemical differences of EtOAc extracts of Radix isatidis from various sources in the HPLC fingerprints were probed with hierarchical clustering analysis and similarity analysis. The correlation between the HPLC fingerprints and in vitro antibacterial activities was analyzed with multivafiant correlation analysis. Results Close correlation existed between the HPLC fingerprints and in vitro antibacterial activities of EtOAc extracts of Radix isatidis. Conlusion The combination of HPLC fingerprints and antibacterial activities can be used to discover principle components of Radix isatidis on bioactivity. 展开更多
关键词 Radix isatidis HPLC Fingerprint Antibacterial activity Correlation analysis
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Study on Infrared Fingerprints of Different Sources of Yi Medicine Ebazema
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作者 Hong YANG Ying LI +4 位作者 Risha WEIZE Jixiu SHEN Xuexue LI Yuan LIU Rui ZENG 《Medicinal Plant》 CAS 2019年第1期46-50,共5页
[Objectives] To establish infrared fingerprints of different parts of Boenninghausenia albiflora(Hook.) Reichb.ex Meissn. and Boenninghausenia sessilicarpa Levl.(two sources of Yi medicine Ebazema) and analyze the sim... [Objectives] To establish infrared fingerprints of different parts of Boenninghausenia albiflora(Hook.) Reichb.ex Meissn. and Boenninghausenia sessilicarpa Levl.(two sources of Yi medicine Ebazema) and analyze the similarity between them. [Methods] The infrared fingerprints of powder of B. albiflora(Hook.) Reichb.ex Meissn. and B. sessilicarpa Levl. were measured, and the common peak rate and variation peak rate of six samples were calculated to establish the sequence analysis method of common peak rate. [Results] There was a very high common peak rate(≥81.3%) and a very low variation peak rate(≤15.4%) between S1 and S4 as well as S2 and S6. There was a low common peak rate between S1 and S3 as well as S3 and S4, and the common peak rate was 42.9% and 47.6% respectively. There was a low common peak rate(≤47.6%) and a high variation peak rate(≥100.0%) between S1 and S3 as well as S3 and S4. [Conclusions] The method is simple and convenient to operate, can quickly identify different parts used as medicine of B. albiflora(Hook.) Reichb.ex Meissn. and B. sessilicarpa Levl.(two sources of Yi medicine Ebazema), and provide a new method to judge whether the two are equivalent when being used as medicine and quality evaluation. 展开更多
关键词 Boenninghausenia albiflora(Hook.) Reichb.ex Meissn. Boenninghausenia sessilicarpa Levl. INFRARED fingerprints Common PEAK RATE Variation PEAK RATE
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大联大世平集团推出基于NXP和Fingerprints产品的指纹电子锁解决方案
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《世界电子元器件》 2017年第8期33-33,共1页
2017年5月18日,致力于亚太地区市场的领先半导体元器件分销商——大联大控股宣布,其旗下世平推出基于恩智浦半导体(NXP)LPC54101和Fingerprints FPC1025的指纹电子锁解决方案,其具有安全性高、不可复制性、记忆性强等特点,支持3秒内快... 2017年5月18日,致力于亚太地区市场的领先半导体元器件分销商——大联大控股宣布,其旗下世平推出基于恩智浦半导体(NXP)LPC54101和Fingerprints FPC1025的指纹电子锁解决方案,其具有安全性高、不可复制性、记忆性强等特点,支持3秒内快速指纹录入,同时还支持蓝牙数据上传的功能。 展开更多
关键词 指纹电子锁 FPC fingerprints 世平 NXP
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Development of the fingerprints for the quality evaluation of Viscum coloratum by high performance liquid chromatography 被引量:7
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作者 Yun-Li Zhao Rong-Hua Fan +3 位作者 Hong-Xia Yuan Miao Yu Kai-Shun Bi Zhi-Guo Yu 《Journal of Pharmaceutical Analysis》 SCIE CAS 2011年第2期113-118,共6页
A high-performance liquid chromatography coupled ultraviolet (HPLC-UV) method was developed for a chemical fingerprint analysis of Viscum coloratura. Eighteen peaks were selected as the common peaks and Homoeriodict... A high-performance liquid chromatography coupled ultraviolet (HPLC-UV) method was developed for a chemical fingerprint analysis of Viscum coloratura. Eighteen peaks were selected as the common peaks and Homoeriodictyol-7-O-β-D-apiosiyl-(1→2)-β-D-glucoside was used as a reference. The relative areas of common peaks were used for hierarchical clustering analysis and similarity calculation. Thirty-seven samples collected from different sources were classified into five groups. The similarities of 21 batches Viscum coloratura samples were beyond 0.90. The results obtained suggest that the chromatographic fingerprint can efficiently identify Viscum coloratum. Additionally, the fingerprints can then be used to evaluate the correlation between Viscum coloratura and hosts. 展开更多
关键词 Viscum coloratum QUALITY high-performance liquid chromatography FINGERPRINT
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Spectrum-Effect Relationship Between High Performance Liquid Chromatography Fingerprints and Anticoccidial Activities of a Compound Chinese Medicine 被引量:5
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作者 XIAO Sui FEI Chen-zhong +3 位作者 ZHANG Li-fang ZHENG Wen-li ZHANG Ke-yu XUE Fei-qun 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2014年第5期1082-1089,共8页
Quality control and screening of active substances in traditional Chinese medicines have been performed using fingerprint analysis. The spectrum-effect relationship between chromatography fingerprints and efficacy of ... Quality control and screening of active substances in traditional Chinese medicines have been performed using fingerprint analysis. The spectrum-effect relationship between chromatography fingerprints and efficacy of herbal drugs is considered as a potentially useful method for determining active ingredients in complex mixtures. The study was designed to develop a method for determining the bioactive components of a compound Chinese medicine called Tiefeng based on spectrum-effect relationships between high-performance liquid chromatography (HPLC) fingerprints and anticoccidial activities. Four peaks of the established HPLC fingerprint indicate the main bioactive components of this medicine. In addition, pharrnacodynamic atlas was defined and used to assess the anticoccidial activity of Tiefeng from different sources for the first time. We found that the level of anticoccidial activity of Tiefeng was consistent with the degree of similarity between the pharmacodynamic atlas and chromatogram of any sample. Furthermore, effect of this medicine was related with the main active constituents, along with the origin and the harvesting time. 展开更多
关键词 herb medicine FINGERPRINT anticoccidial index spectrum-effect relationship
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Molecular Fingerprints of Soil Organic Matter in a Typical Freshwater Wetland in Northeast China 被引量:4
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作者 LI Zhe ZHANG Zhongsheng +5 位作者 XUE Zhenshan SONG Xiaolin ZHANG Hongri WU Haitao JIANG Ming LYU Xianguo 《Chinese Geographical Science》 SCIE CSCD 2019年第4期700-711,共12页
Natural wetlands are known to store huge amounts of organic carbon in their soils. Despite the importance of this storage,uncertainties remain about the molecular characteristics of soil organic matter(SOM), a key fac... Natural wetlands are known to store huge amounts of organic carbon in their soils. Despite the importance of this storage,uncertainties remain about the molecular characteristics of soil organic matter(SOM), a key factor governing the stability of soil organic carbon(SOC). In this study, the molecular fingerprints of SOM in a typical freshwater wetland in Northeast China were investigated using pyrolysis gas-chromatography/mass-spectrometry technology(Py-GC/MS). Results indicated that the SOC, total nitrogen(TN),and total sulfur contents of the cores varied between 16.88% and 45.83%, 0.93% and 2.82%, and 1.09% and 3.79%, respectively. The bulk δ^13C and δ^15N varied over a range of 9.85‰, between –26.85‰ and –17.00‰, and between –0.126‰ and 1.002‰, respectively. A total of 134 different pyrolytic products were identified, and they were grouped into alkyl(including n-alkanes(C:0) and n-alkenes(C:1),aliphatics(Al), aromatics(Ar), lignin(Lg), nitrogen-containing compounds(Nc), polycyclic aromatic hydrocarbons(PAHs), phenols(Phs), polysaccharides(Ps), and sulfur-containing compounds(Sc). On average, Phs moieties accounted for roughly 24.11% peak areas of the total pyrolysis products, followed by Lg(19.27%), alkyl(18.96%), other aliphatics(12.39%), Nc compounds(8.08%), Ps(6.49%), aromatics(6.32%), Sc(3.26%), and PAHs(1.12%). Soil organic matter from wetlands had more Phs and Lg and less Nc moieties in pyrolytic products than soil organic matters from forests, lake sediments, pastures, and farmland.δ^13 C distribution patterns implied more C3 plant-derived soil organic matter, but the vegetation was in succession to C4 plant from C3 plant. Significant negative correlations between Lg or Ps proportions and C3 plant proportions were observed. Multiple linear analyses implied that the Ar and Al components had negative effects on SOC. Alkyl and Ar could facilitate ratios between SOC and total nitrogen(C/N), while Al plays the opposite role. Al was positively related to the ratio of dissolved organic carbon(DOC) to SOC. In summary, SOM of wetlands might characterize by more Phs and lignin and less Nc moieties in pyrolytic products. The use of Pyrolysis gas-chromatography/mass-spectrometry(Py-GC/MS) technology provided detailed information on the molecular characteristics of SOM from a typical freshwater wetland. 展开更多
关键词 molecular fingerprint soil organic matter pyrolysis gas-chromatography/mass-spectrometry FRESHWATER MARSH NORTHEAST China
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Studies on the Primers Screening for AFLP Fingerprints of Rice Cultivars 被引量:2
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作者 ZHANG Chun-qing and JIA Ji-zeng(Institute of Crop Germplasm Resources , Chinese Academy of Agricultural Sciences , Beijing 100081 , P. R . China) 《Agricultural Sciences in China》 CAS CSCD 2002年第9期949-953,共5页
AFLP(amplified fragment length polymorphism) is a very powerful fingerprinting technology. The key of making variety fingerprints is to select specific powerful primers for each crop. A quick and effective procedure f... AFLP(amplified fragment length polymorphism) is a very powerful fingerprinting technology. The key of making variety fingerprints is to select specific powerful primers for each crop. A quick and effective procedure for selecting AFLP primers for rice variety fingerprinting was established as the following: (1) Choose3 or more group materials that have close genetic relations. (2) Select potential polymorphic primers from primer pairs that are 2 + 2 primer crosses and same at two ends. (3) Recombine the selected potential polymorphic primers and choosing more polymorphic primers. (4) Add one selecting base at one end to become 2 + 3 or 3 + 2 primers and further selecting more polymorphic primers. Some primers were selected with this procedure, such as M21 P87 and M73P17, with which the fingerprints had more polymorphism and high quality. 展开更多
关键词 Rice AFLP fingerprint Primer selection
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Analysis of SSR Fingerprints in Introduced Silkworm Germplasm Resources 被引量:1
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作者 HOU Cheng-xiang LI Mu-wang +7 位作者 ZHANG Yue-hua QIAN He-ying SUN Ping-jiang XU An-ying MIAO Xue-xia GUO Qiu-hong XIANG Hui HUANG Yong-ping 《Agricultural Sciences in China》 CAS CSCD 2007年第5期620-627,共8页
Thirty-five SSR markers were used to construct 96 silkworm races fingerprint. All the SSR markers were polymorphic and unambiguously separated silkworm strains from each other. A total of 467 alleles were detected wit... Thirty-five SSR markers were used to construct 96 silkworm races fingerprint. All the SSR markers were polymorphic and unambiguously separated silkworm strains from each other. A total of 467 alleles were detected with a mean value of 13.34 alleles/locus (range 3-28). The mean polymorphism index content (PIC) was 0.71 (range 0.299-0.919). UPGMA cluster analysis of Nei's genetic distance grouped silkworm strains on the basis of their origin. The results indicated that SSR markers are efficient tools for fingerprinting cultivars and conducting genetic diversity studies in the silkworm. 展开更多
关键词 silkworm (Bombyx mori L.) GERMPLASM SSR marker FINGERPRINT
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Identification of Four Gastrodia elata Bl. Variants with DNA Fingerprints 被引量:1
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作者 Xiaoli WANG Xiaoling WANG 《Agricultural Biotechnology》 CAS 2012年第4期1-2,6,共3页
[Objective] This study aimed to investigate the four Gastrodia elata B1. variants at the DNA level. [Method] Primers with good reproducibility, abundant polymorphism and high resolution were selected from the 35 rando... [Objective] This study aimed to investigate the four Gastrodia elata B1. variants at the DNA level. [Method] Primers with good reproducibility, abundant polymorphism and high resolution were selected from the 35 random primers with RAPD marker technology and the amplification results were analyzed. [ Result] By using RAPD technology, DNA fingerprints of four Gastrodia elata B1. variants with abundant polymorphism, good reproducibility and high resolution was successfully constructed; to be specific, each Gastrodia elata B1. variant has its unique fingerprint with primers S29 and S38 ; DNA bands of the Gastrodia elata BI. variants vary significantly, which is contributive to distinguish the four Gastrodia clara B1. variants. [Condusion] This study provided an effective means for the identification and protection of Gastrodia elata germplasms with intraspecific variations. 展开更多
关键词 C.astrodia elata B1. germplasms RAPD DNA fingerprint
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Comparing biomarkers and proteomic fingerprints for classification studies
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作者 Brian T. Luke Jack R. Collins +3 位作者 Jens K. Habermann DaRue A. Prieto Timothy D. Veenstra Thomas Ried 《Journal of Biomedical Science and Engineering》 2013年第4期453-465,共13页
Early disease detection is extremely important in the treatment and prognosis of many diseases, especially cancer. Often, proteomic fingerprints and a pattern recognition algorithm are used to classify the pathologica... Early disease detection is extremely important in the treatment and prognosis of many diseases, especially cancer. Often, proteomic fingerprints and a pattern recognition algorithm are used to classify the pathological condition of a given individual. It has been argued that accurate classification of the existing data implies an underlying biological significance. Two fingerprint-based classifiers, decision tree and medoid classification algorithm, and a biomarker-based classifier were examined using a published dataset of mass spectral peaks from 81 healthy individuals and 78 individuals with benign prostate hyperplasia (BPH). For all three methods, classifiers were constructed using the original data and the data after permuting the labels of the samples (BPH and healthy). The fingerprint-based classifiers produced accurate results for the original data, though the peaks used in a given classifier depended upon which samples were placed in the training set. Accurate results were also obtained for the dataset with permuted labels. In contrast, only three unique peaks were identified as putative biomarkers, producing a small number of reasonably accurate biomarker-based classifiers. The dataset with permuted labels was poorly classified. Since fingerprint-based classifiers accurately classified the dataset with permuted labels, the argument for biological significance from a fingerprint-based classifier must be questioned. 展开更多
关键词 BIOMARKER CLASSIFIER PROTEOMIC FINGERPRINT
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Characterization of mineral element fingerprints under soilcrop systems in eastern and western rice-producing areas of Jilin Province,China
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作者 BU Yuanbo CAO Shuhe LI Linze 《Global Geology》 2022年第4期277-286,共10页
To assess the indicative function of the fingerprint characteristics of mineral elements for small agricultural producing areas,20 sets of soil surface samples and corresponding rice samples were collected from Songyu... To assess the indicative function of the fingerprint characteristics of mineral elements for small agricultural producing areas,20 sets of soil surface samples and corresponding rice samples were collected from Songyuan and Hunchun of Jilin Province,China.Forty-six mineral elements of brown rice,soil,and rice husk were examined by inductively coupled plasma mass spectrometry.Ten characteristic elements(Li,Ag,Y,Bi,U,Eu,Er,Rb,Mo and As)were identified via multivariate statistics(Variance importance value analysis and rank sum test in SPSS and SIMCA software packages).The correlation of mineral elements in brown rice,soil,and rice husks of the two sample areas was analyzed and regression analysis models of characteristic mineral elements in brown rice were developed.The results indicate that a correlation exists among brown rice,soil,and rice husks in the same area,and the correlation tests using selected elements showed that all correlation coefficients were 0.65 or above.Differences in brown rice were found between different regions.Consequently,brown rice producing areas can be distinguished by the fingerprint characteristics of mineral elements. 展开更多
关键词 Jilin Province rice producing area soil-crop system mineral element fingerprint
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Integrated evaluation of HPLC fingerprints for the quality control of Ginseng Yang Rong Wan by multi-wavelength fusion fingerprint method
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作者 Hanxiao Chi Guoxiang Sun 《Asian Journal of Traditional Medicines》 2019年第4期171-182,共12页
The aim of this study was to develop comprehensive evaluation methods for the quality control of Ginseng Yang Rong Wan(RSYRW).Multi-wavelength fusion fingerprints were successfully developed by high-performance liquid... The aim of this study was to develop comprehensive evaluation methods for the quality control of Ginseng Yang Rong Wan(RSYRW).Multi-wavelength fusion fingerprints were successfully developed by high-performance liquid chromatography,which avoided the one-sidedness of single fingerprinting.Characteristic fingerprints of thirty batches of samples were generated at five wavelengths and evaluated by quantified ratio fingerprint method(QRFM).The results showed that thirty batches of samples were classified into seven grades.The methods established in this paper were found suitable for the analysis of Ginseng Yang Rong Wan. 展开更多
关键词 GINSENG Yang Rong WAN quantified ratio FINGERPRINT METHOD traditional Chinese MEDICINE
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