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基于全基因组正选择基因揭示大狐蝠和小棕蝠功能分化分子机制 被引量:3
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作者 曾燕妮 沈永义 张亚平 《Zoological Research》 CAS CSCD 北大核心 2013年第3期221-227,共7页
小棕蝠(Myotis lucifugus)和大狐蝠(Pteropus vampyrus)在生理和行为上有诸多差异,应被诉诸于分子水平并加以系统探讨。该研究对包括小棕蝠和大狐蝠在内的7个哺乳动物全基因组同源编码序列进行了高质量比对,使用比对序列进行了分别以两... 小棕蝠(Myotis lucifugus)和大狐蝠(Pteropus vampyrus)在生理和行为上有诸多差异,应被诉诸于分子水平并加以系统探讨。该研究对包括小棕蝠和大狐蝠在内的7个哺乳动物全基因组同源编码序列进行了高质量比对,使用比对序列进行了分别以两个蝙蝠枝为前景枝的全基因组水平选择压力分析,并对两种蝙蝠中的正选择基因进行了富集聚类分析。结果表明,在小棕蝠枝受到正选择的基因数高于大狐蝠枝;两种蝙蝠中独立受到正选择的基因富集于不同的功能类别;且正选择基因的富集差异与小棕蝠和大狐蝠在免疫、运动协调、能量代谢和感觉器官发育等关键生物学功能方面的分化大体吻合。 展开更多
关键词 小棕蝠 大狐蝠 正选择 适应性性进化 基因组
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Participatory Action Research for Catalyzing Adaptive Management: Analysis of a "Fits and Starts" Process
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作者 C.J.P. Colfer E. Andriamampandry +4 位作者 S. Asaha E. Lyimo E. Martini J.L. Pfund J. Watts 《Journal of Environmental Science and Engineering》 2011年第1期28-43,共16页
This paper argues that contextual constraints can significantly interfere with the conduct of research and development, and accordingly should be analyzed more honestly. It describes a five country research project, L... This paper argues that contextual constraints can significantly interfere with the conduct of research and development, and accordingly should be analyzed more honestly. It describes a five country research project, Landscape Mosaics, in which participatory action research (PAR) was intended as one of two central approaches in the original research design (the other approach being more conventional research). The five sites, in Cameroon, Indonesia, Laos, Madagascar, and Tanzania, are described, with an emphasis on their implementation of PAR. The fact that personnel and partners on three of the five sites failed to implement PAR is analyzed, to determine the constraints to such action. These findings are then compared with our experience with two other similar projects in which PAR was more widely implemented. We conclude by identifying the most important constraints to be overcome in implementing a PAR process, something we consider important in efforts to deal with change processes in developing countries. 展开更多
关键词 Participatory action research research approach LANDSCAPE BIODIVERSITY community
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Approaches to Detecting Gene-Environment Interactions in Human Variation Using Genetic Engineering, Remote Sensing and GIS
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《Journal of Earth Science and Engineering》 2013年第6期371-378,共8页
Elucidation of the relationships between genetic polymorphisms and environmental exposures can provide insights into the pathways and mechanisms underlying complex traits. A new approach was used to detect G×E (... Elucidation of the relationships between genetic polymorphisms and environmental exposures can provide insights into the pathways and mechanisms underlying complex traits. A new approach was used to detect G×E (gene-environment) interactions involved in human skin pigmentation variation to better understand the adaptive evolution of skin pigmentation. Specifically, we used genetic engineering, remote UVR (ultraviolet radiation) sensing and GIS (geographic information systems) to integrate the analysis of genetic and environmental factors into a coherent biological framework. Since we expected to generate large datasets for this multidimensional analysis, we used PCA (principal components analysis) as a spatial statistical analysis technique for analyzing the G×E interactions. The results suggest that skin pigmentation may be affected by mutations induced by UVR and support the hypothesis that global variation in skin pigmentation may be the result of localized adaptation to different UVR conditions via natural selection. Analyzing the relationships between heterozygous frequencies for SNP (single nucleotide polymorphism) loci and seasonal UVR levels as the environment changes will help elucidate the selective mechanisms involved in the UVR-induced evolution of skin pigmentation. Skin pigmentation fulfills the criteria for a successful evolutionary G×E interactions model. 展开更多
关键词 RS (remote sensing) GIS genetic engineering G×E interactions adaptability.
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