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龟裂链霉菌M527荧光定量PCR内参基因的选择及其稳定性评估
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作者 徐洁 胡叶锋 +2 位作者 廖芷君 马正 俞晓平 《中国生物防治学报》 CSCD 北大核心 2020年第3期429-436,共8页
龟裂链霉菌Streptomyces rimosus M527是龟裂霉素(rimocidin)的生产菌,其对多种植物病原真菌具有较强的拮抗作用。为从转录水平分析菌株M527以及其抗性突变株中龟裂霉素的合成调控机制,荧光定量PCR内参基因的选择与稳定性评估显得尤为... 龟裂链霉菌Streptomyces rimosus M527是龟裂霉素(rimocidin)的生产菌,其对多种植物病原真菌具有较强的拮抗作用。为从转录水平分析菌株M527以及其抗性突变株中龟裂霉素的合成调控机制,荧光定量PCR内参基因的选择与稳定性评估显得尤为重要。本研究选用16SrRNAsr、hrd Bsr、rpoAsr、sigFsr、sigBsr、gyrBsr这6个基因作为候选内参基因,使用geNorm、NormFinder、BestKeeper三个软件分析在野生型龟裂链霉菌M527、高产龟裂霉素抗性突变株M527-GR7和低产龟裂霉素抗性突变株M527-GR21中候选内参基因的稳定性,筛选出稳定性最高的内参基因。结果显示,sigBsr基因在菌株M527及抗性突变株M527-GR7和M527-GR21中表达稳定性最好。通过以基因sigBsr、16S rRNAsr、rpoAsr为内参基因,检测龟裂霉素生物合成基因簇中的结构基因rim Gsr在菌株M527-GR7中不同时间的相对表达量,发现基因sigBsr作为内参基因时能得到更准确的结果。 展开更多
关键词 龟裂链霉菌m527 荧光定量PCR 内参基因 稳定性
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Development and optimization of an intergeneric conjugation system and analysis of promoter activity in Streptomyces rimosus M527 被引量:5
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作者 Zhang-qing SONG Zhi-jun LIAO +3 位作者 Ye-feng HU Zheng MA Andreas BECHTHOLD Xiao-ping YU 《Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)》 SCIE CAS CSCD 2019年第11期891-900,共10页
An efficient genetic transformation system and suitable promoters are essential prerequisites for gene expression studies and genetic engineering in streptomycetes.In this study,firstly,a genetic transformation system... An efficient genetic transformation system and suitable promoters are essential prerequisites for gene expression studies and genetic engineering in streptomycetes.In this study,firstly,a genetic transformation system based on intergeneric conjugation was developed in Streptomyces rimosus M527,a bacterial strain which exhibits strong antagonistic activity against a broad range of plant-pathogenic fungi.Some experimental parameters involved in this procedure were optimized,including the conjugative media,ratio of donor to recipient,heat shock temperature,and incubation time of mixed culture.Under the optimal conditions,a maximal conjugation frequency of 3.05^10-5 per recipie nt was obtai ned.Subseque ntly,based on the above developed and optimized tran sformati on system,the synthetic promoters SPL-21 and SPL-57,a native promoter potrB,and a constitutive promoter permE commonly used for gene expression in streptomycetes were selected and their activity was analyzed using gusA as a reporter gene in S.rimosus M527.Among the four tested promoters,SPL-21 exhibited the strongest expression activity and gave rise to a 2.2-fold increase in p-glucuronidase(GUS)activity compared with the control promoter permE.Promoter SPL-57 showed activity comparable to that of permE.Promoter potrB,which showed the lowest activity,showed a 50%decrease in GUS activity compared with the control permE.The transformation system developed in this study and the tested promotors provide a basis for the further modification of S.rimosus M527. 展开更多
关键词 Streptomyces rimosus m527 Intergeneric conjugation PROmOTER β-Glucuronidase(GUS)
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