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Mitochondrial DNA haplogroup associated with sperm motility in the Han population 被引量:1
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作者 Guo-Fang Feng Jing Zhang +3 位作者 Li-Min Feng Nai-Xian Shen Le-Jun Li Yi-Min Zhu 《Asian Journal of Andrology》 SCIE CAS CSCD 2013年第5期630-633,共4页
In this study, we aimed to determine whether the main mitochondrial DNA (mtDNA) haplogroups of the Han people have an impact on spermatozoa motility, We recruited 312 men who were consecutively admitted to two affil... In this study, we aimed to determine whether the main mitochondrial DNA (mtDNA) haplogroups of the Han people have an impact on spermatozoa motility, We recruited 312 men who were consecutively admitted to two affiliated hospitals of College of Medicine, Zhejiang University from May 2011 to April 2012 as part of fertility investigations. Semen and whole blood samples were collected from the men. We determined the mtDNA haplogroups by analysing the sequences of mtDNA hypervariable segment I and testing diagnostic polymorphisms in the mtDNA coding region with DNA probes, No significant differences were found in the clinical characteristics of the mtDNA haplogroup R and non-R (P〉0.05). Our results suggest that mtDNA haplogroup R is a strong independent predictor of sperm motility in the Han population, conferring a 2.97-fold (95% confidence interval: 1.74-4.48, P〈0.001) decreased chance of asthenozoospermia compared with those without haplogroup R. 展开更多
关键词 ASTHENOZOOSPERMIA haplogroup mitochondrial DNA (mtDNA)
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Presence of G84E Allelic Heterogeneity of the European Prostate Cancer SNP Mutation of HOX13B-G84E Associated with the European R-Haplogroup of Y-Chromosome and Absence of Gene Flow into Moroccans Patients
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作者 Ihsan Ali Mahasneh Moulay Mustapha Ennaji +1 位作者 Berjas Abumsimir Yassine Kasmi 《Journal of Biosciences and Medicines》 2021年第5期50-61,共12页
SNP mutations in the HOXB13 gene associated with prostate cancer were determined in Moroccans prostate cancer patients (PCa). All PCa SNP mutations were new and belong to the SNP point-mutations located on the stop co... SNP mutations in the HOXB13 gene associated with prostate cancer were determined in Moroccans prostate cancer patients (PCa). All PCa SNP mutations were new and belong to the SNP point-mutations located on the stop codon of HOXB13 exon 1 and 2 located in chromosome 17. The five mutations and their frequencies were as follows: rs1197613952 (12%), rs1597934612 (4%), rs1597933874 (4%), rs1597933837 (4%) and rs867793282 (4%). The European HOXB13-G84E (rs138213197) PCa mutation was not detected among Moroccan patients. The Y-chromosome genealogical haplotypes of the Western European (R1b1b2-M2G9) and the Eastern European (R191a-M-17) were not observed in Moroccans PCa patients. The patients have their own haplotypes E1b1 and J with a frequency of 55 and 35%, respectively. The results of the SNP mutations in the HOXB13, the absence of the HOXB13-G84E of the European in the Moroccans PCa patients, the absence of the European-lineage haplogroups (R1a1a-M17 and R1b1b2-M269) and the presence of E1b1b and J in Moroccans PCa patients would clearly indicate the absence of gene flow from European to Moroccans gene pool. 展开更多
关键词 Prostate Cancer HOXB13 G84E Allelic Heterogeneity Y-Chromosome haplogroups European Genome Moroccan Genome Gene Flow
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Major depressive disorder is associated with mitochondrial ND6 T14502C mutation in two Han Chinese families
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作者 Pan Jing Hai-Hang Yu +7 位作者 Ting-Ting Wu Bi-Hua Yu Ming Liang Ting-Ting Xia Xue-Wen Xu Ting Xu Ling-Jiang Liu Xiao-Bin Zhang 《World Journal of Psychiatry》 SCIE 2024年第11期1746-1754,共9页
BACKGROUND Globally,the World Health Organization ranks major depressive disorder(MDD)as the leading cause of disability.However,MDD molecular etiology is still poorly understood.AIM To explore the possible associatio... BACKGROUND Globally,the World Health Organization ranks major depressive disorder(MDD)as the leading cause of disability.However,MDD molecular etiology is still poorly understood.AIM To explore the possible association between mitochondrial ND6 T14502C mutation and MDD.METHODS Clinical data were collected from two pedigrees,and detailed mitochondrial genomes were obtained for the two proband members.The assessment of the resulting variants included an evaluation of their evolutionary conservation,allelic frequencies,as well as their structural and functional consequences.Detailed mitochondrial whole genome analysis,phylogenetic,and haplotype analysis were performed on the probands.RESULTS Herein,we reported the clinical,genetic,and molecular profiling of two Chinese families afflicted with MDD.These Chinese families exhibited not only a range of onset and severity ages in their depression but also extremely low penetrances to MDD.Sequence analyses of mitochondrial genomes from these pedigrees have resulted in the identification of a homoplasmic T14502C(I58V)mutation.The polymorphism is located at a highly conserved isoleucine at position 58 of ND6 and distinct mitochondrial DNA(mtDNA)polymorphisms originating from haplogroups M10 and H2.CONCLUSION Identifying the T14502C mutation in two individuals with no genetic relation who exhibit symptoms of depression provides compelling evidence that this mutation may be implicated in MDD development.Nonetheless,the two Chinese pedigrees that carried the T14502C mutation did not exhibit any functionally significant mutations in their mtDNA.Therefore,the phenotypic expression of the T14502C mutation related to MDD may be influenced by the nuclear modifier gene(s)or environmental factors. 展开更多
关键词 Major depressive disorder Mitochondrial DNA ND6 T14502C MUTATION haplogroup CHINESE
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Convergence of Y Chromosome STR Haplotypes from Different SNP Haplogroups Compromises Accuracy of Haplogroup Prediction 被引量:9
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作者 Chuan-Chao Wang Ling-Xiang Wang +5 位作者 Rukesh Shrestha Shaoqing Wen Manfei Zhang Xinzhu Tong Li Jin Hui Li 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2015年第7期403-407,共5页
The paternally inherited Y chromosome has been widely used in forensics for personal identification, in anthropology and population genetics to understand origin and migration of human populations, and also in medical... The paternally inherited Y chromosome has been widely used in forensics for personal identification, in anthropology and population genetics to understand origin and migration of human populations, and also in medical and clinical studies (Wang and Li, 2013; Wang et al., 2014). There are two kinds of extremely useful markers in Y chromosome, single nucle- otide polymorphism (SNP) and short tandem repeats (STRs). With a very low mutation rate on the order of 3.0 x 10-8 mutations/nucleotide/generation (Xue et al., 2009), SNP markers have been used in constructing a robust phylogeny tree linking all the Y chromosome lineages from world pop- ulations (Karafet et al., 2008). Those lineages determined by the pattern of SNPs are called haplogroups. That is to say, we have to genotype an appropriate number of SNPs in order to assign a given Y chromosome to a haplogroup. Compared with SNPs, the mutation rates of STR markers are about four to five orders of magnitude higher (Gusmgo et al., 2005; Ballantyne et al., 2010). Typing STR has advantages of saving time and cost compared with typing SNPs in phylogenetic assignment of a Y chromosome (Wang et al., 2010). A set of STR values for an individual is called a haplotype. Because of the disparity in mutation rates between SNP and STR, one SNP haplogroup could actually comprise many STR haplotypes (Wang et al., 2010). It is most interesting that STR variability is clustered more by haplogroups than by populations (Bosch et al., 1999; Behar et al., 2004), which indicates that STR haplotypes could be used to infer the haplogroup information of a given Y chromosome. There has been increasing interest in this cost- effective strategy for predicting the haplogroup from a given STR haplotype when SNP data are unavailable. For instance, Vadim Urasin's YPredictor (http://predictor.ydna.ru/), Whit Atheys' haplogroup predictor (http://www.hprg.com/hapest5/) (Athey, 2005, 2006), and haplogroup classifier of Arizona University (Schlecht et al., 2008) have been widely employed in previous studies for haplogroup prediction (Larmuseau et al., 2010; Bembea et al., 2011; Larmuseau et al., 2012; Tarlykov et al., 2013). 展开更多
关键词 STR Convergence of Y Chromosome STR Haplotypes from Different SNP haplogroups Compromises Accuracy of haplogroup Prediction SNP SNPs
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Mitochondrial DNA Haplogroups and the Risk of Sporadic Parkinson's Disease in Han Chinese 被引量:4
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作者 Ya-Fang Chen Wan-Jin Chen +4 位作者 Xiao-Zhen Lin Qi-Jie Zhang Jiang-Ping Cai Chia-Wei Liou Ning Wang 《Chinese Medical Journal》 SCIE CAS CSCD 2015年第13期1748-1754,共7页
Background: Mitochondrial dysflmction is linked to the pathogenesis of Parkinson's disease (PD). However, the precise role of mitochondrial DNA (mtDNA) variations is obscure. On the other hand, mtDNA haplogroups... Background: Mitochondrial dysflmction is linked to the pathogenesis of Parkinson's disease (PD). However, the precise role of mitochondrial DNA (mtDNA) variations is obscure. On the other hand, mtDNA haplogroups have been inconsistently reported to modify the risk of PD among differeni population. Here, we try to explore the relationship between mtDNA haplogroups and sporadic PD in a Han Chinese population. Methods: Nine single-nucleotide polymorphisms, which define the major Asian mtDNA haplogroups (A, B, C, D, F, G), were detected via polymerase chain reaction-restriction fragment length polymorphism or denaturing polyacrylamide gel electrophoresis in 279 sporadic PD patients and 510 matched controls of Hart population. Results: Overall, the distribution ofmtDNA haplogroups did not show any significant differences between patients and controls. However, alter stratification by age at onset, the frequency of haplogroup B was significantly lower in patients with early-onset PD (EOPD) compared to the controls (odds ratio [OR] =0.225, 95% confidence interval [CI]: 0.082-0.619, P 0.004), while other haplogroups did not show significant differences. Alter stratification by age at examination, among subjects younger than 50 years of age: Haplogroup B also showed a lower frequency in PD cases (OR = 0. 146, 95% CI: 0.030-0.715~ P = 0.018) while haplogroup D presented a higher risk of PD (OR - 3.579, 95% CI: 1. 112-11.523, P = 0.033), other haplogroups also did not show significant differences in the group. Conclusions: Our study indicates that haplogroup B might confer a lower risk for EOPD and people younger than 50 years in Han Chinese, while haplogroup D probably lead a higher risk of PD in people younger than 50 years of age. In brief particular Asian mtDNA haplogroups likely play a role in the pathogenesis of PD among Hart Chinese. 展开更多
关键词 l-tan Chinese haplogroupS Mitochondrial DNA Parkinson's Disease
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Mitochondrial haplogroups associated with Japanese centenarians, Alzheimer's patients, Parkinson's patients, type 2 diabetic patients and healthy non-obese young males 被引量:4
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作者 Shigeru Takasaki 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2009年第7期425-434,共10页
The relationships between five classes of Japanese people (i.e., 96 centenarians, 96 Alzheimer's disease (AD) patients, 96 Parkinson's disease (PD) patients, 96 type 2 diabetic (T2D) patients, and 96 healthy ... The relationships between five classes of Japanese people (i.e., 96 centenarians, 96 Alzheimer's disease (AD) patients, 96 Parkinson's disease (PD) patients, 96 type 2 diabetic (T2D) patients, and 96 healthy non-obese young males) and their mitochondrial single nucleotide polymorphism (mtSNP) frequencies at individual mtDNA positions of the entire mitochondrial genome were examined using the radial basis function (RBF) network and the modified method. New findings of mitochondrial haplogroups were obtained for individual classes. The five classes of people were associated with the following haplogroups: Japanese centenarians-M7b2, D4b2a, and B5b; Japanese AD patients-G2a, B4cl, and N9b1; Japanese PD patients-M7b2, B4e, and B5b; Japanese T2D patients-B5b, M8al, G, D4, and F1; and Japanese healthy non-obese young males-D4g and D4b1b. From the points of common haplogroups among the five classes, the cente- narians have the common haplogroups M7b2 and B5b with the PD patients and common haplogroup B5b with the T2D patients. In addition, the 112 Japanese semi-supercentenarians (over 105 years old) recently reported were also examined by the method proposed. The results obtained were the haplogroups D4a, B4c1a, M7b2, F1, M1, and B5b. These results are different from the previously reported haplogroup classifications. As the proposed analysis method can predict a person's mtSNP constitution and the probabilities of becoming a centenarian, AD patient, PD patient, or T2D patient, it may be useful in initial diagnosis of various diseases. 展开更多
关键词 mtSNPs haplogroup semi-supercentenarians CENTENARIANS Alzheimer's disease Parkinson's disease type 2 diabetic patients healthy non-obese young males radial basis function (RBF)
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Major depressive disorder is correlated with the mitochondrial ND1 T3394C mutation in two Han Chinese families:Two case reports 被引量:1
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作者 Pan Jing Xi Mei +5 位作者 Yuan-Yuan Zhang Fei-Jie Zheng Xiao-Min Luo Ling-Jiang Liu Hai-Hang Yu Xiao-Bin Zhang 《World Journal of Psychiatry》 SCIE 2023年第2期75-83,共9页
BACKGROUND Major depressive disorder(MDD)is the most frequent reason of disabled people in the world,as reported by the World Health Organization.However,the diagnosis of MDD is mainly based on clinical symptoms.CASE ... BACKGROUND Major depressive disorder(MDD)is the most frequent reason of disabled people in the world,as reported by the World Health Organization.However,the diagnosis of MDD is mainly based on clinical symptoms.CASE SUMMARY The clinical,genetic,and molecular characteristics of two Chinese families with MDD are described in this study.There were variable ages of onset and severity in depression among the families.Both Chinese families had a very low prevalence of MDD.The mitochondrial genomes of these pedigrees were sequenced and indicated a homoplasmic T3394C(Y30H)mutation,with the polymorphism located at a highly conserved tyrosine at position 30 of ND1.The analysis also revealed unique sets of mitochondrial DNA(mtDNA)polymorphisms originating from haplogroups M9a3 and M9a.CONCLUSION This finding of the T3394C mutation in two unrelated depressed patients provides strong evidence that this mutation may have a part in the etiology of MDD.However,In these two Chinese families having the T3394C mutation,no functional mt DNA mutation was observed.Therefore,T3394C mutations are related with MDD,and the phenotypic manifestation of these mutations may be affected by changes in nuclear genes or environmental factors. 展开更多
关键词 Major depressive disorder Mitochondrial DNA ND1 MUTATION haplogroup Chinese Case report
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Ion Ampliseq HID Y-SNP Research Panel V1试剂盒的法医学验证
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作者 蔡信 王凯旋 +4 位作者 缪路 朱久亮 刁中杰 吴静 徐伟 《刑事技术》 2023年第6期602-609,共8页
为了测试Ion Ampliseq HID Y-SNP Research Panel V1试剂盒的技术性能指标,评估其法医学应用价值,本研究从测序表现、重复性和灵敏度等方面对该试剂盒进行测试,并采用该试剂盒对一个家系中44份遗传关系清晰但存在Y-STR突变的样本进行检... 为了测试Ion Ampliseq HID Y-SNP Research Panel V1试剂盒的技术性能指标,评估其法医学应用价值,本研究从测序表现、重复性和灵敏度等方面对该试剂盒进行测试,并采用该试剂盒对一个家系中44份遗传关系清晰但存在Y-STR突变的样本进行检测。测序结果表明,每轮测序均产生了不低于1.97 Gb的数据,序列比中率超过99%,平均有845个(98.37%)Y-SNP位点可用于后续分析,测序结果可靠。标准品DNA 9948的分型准确,结果一致,重复性好,灵敏度可低至100 pg。所有检测的家系样本均可获得高分辨率的一致性Y-SNP单倍群。综上,Ion Ampliseq HID Y-SNP Research Panel V1试剂盒的测序质量优良,灵敏度高,重复性好,可作为家系排查的补充手段之一。 展开更多
关键词 法医遗传学 家系排查 单倍群 Y染色体单核苷酸多态性 二代测序
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中国人群携带m.14484T>C突变的Leber’s遗传性视神经病变线粒体单体型及多态位点分析 被引量:11
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作者 孟祥娟 朱金萍 +9 位作者 高敏 张赛 赵福新 张娟娟 刘晓玲 韦企平 童绎 张铭连 瞿佳 管敏鑫 《遗传》 CAS CSCD 北大核心 2014年第4期336-345,共10页
线粒体ND6基因(MT-ND6)上的m.14484T>C突变是Leb er's遗传性视神经病变(Leber's hereditary optic neuropathy,LHON)的一个原发性突变,但该突变自身不足以产生视力损伤.为研究线粒体单体型对携带该突变人群LHON发病的影响,文章对... 线粒体ND6基因(MT-ND6)上的m.14484T>C突变是Leb er's遗传性视神经病变(Leber's hereditary optic neuropathy,LHON)的一个原发性突变,但该突变自身不足以产生视力损伤.为研究线粒体单体型对携带该突变人群LHON发病的影响,文章对1 177例中国汉族LHON患者MT-ND6基因进行了全面系统的筛查,共筛查到67例患者携带m.14484T>C同质性突变,在该研究群体中所占比例为5.7%.携带m.14484T>C突变的51例家系LHON的外显率从5.6%~100.0%不等,平均外显率为21.5%.对家系中51例先证者线粒体全基因组进行分析,各表现为不同的多态性,分别属于18个东亚线粒体单体型.其中单体型A和单体型F在病例组频率均明显低于106例对照组.另外,单体型M10a在病例组中占9.8%,在对照组中未被发现,进一步发现该单体型家系LHON的平均外显率(46.13%)显著高于其他单体型家系的平均外显率,提示线粒体单体型M10a可能增加视力损伤的风险. 展开更多
关键词 LEBER遗传性视神经病变 线粒体 突变 单体型 外显率
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中国6个人群中Y染色体15个双等位基因标记变异频率分布及单体群分析 被引量:8
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作者 于敏 张咏莉 +11 位作者 陈峰 薛雅丽 于旸 马琳琳 黄小义 刘岸 史榕茜 吕芙蕖 黄承滨 张贵寅 李璞 傅松滨 《Acta Genetica Sinica》 SCIE CAS CSCD 北大核心 2002年第4期283-289,共7页
以 6个群体 (5个民族 ) 342名男性为研究对象 ,采用等位基因特异性PCR技术对Y染色体上 15个双等位基因标记进行基因分型 ,得到 15个标记的变异频率分布并界定了 6个群体的单体群。结果显示 ,两个汉族人群中M9G的频率相当高 (96 2 0 %和... 以 6个群体 (5个民族 ) 342名男性为研究对象 ,采用等位基因特异性PCR技术对Y染色体上 15个双等位基因标记进行基因分型 ,得到 15个标记的变异频率分布并界定了 6个群体的单体群。结果显示 ,两个汉族人群中M9G的频率相当高 (96 2 0 %和 96 4 3% ) ,为一特征性标志 ;四川汉族以高M95T(82 14 % )为显著特点 ;回族以M4 5A(18 5 7% )的高频率有别于其他 5个群体 (0 % )。进一步对单体群分析表明 ,4个少数民族群体享有共同的基本单体群 ,并根据群体间的共有单体群比较推测出 4个少数民族间的相对遗传距离 。 展开更多
关键词 中国 基因标记 变异频率分布 Y染色体 双等位基因 单体群
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拓跋鲜卑与四个北方少数民族间亲缘关系的遗传学分析 被引量:7
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作者 于长春 谢力 +2 位作者 张小雷 周慧 朱泓 《东北师大学报(自然科学版)》 CAS CSCD 北大核心 2007年第4期121-126,共6页
为了从整体上了解拓跋鲜卑的遗传多态性及其对中国北方少数民族起源的影响,对33例东汉到魏晋时期的拓跋鲜卑遗存的线粒体DNA进行了遗传学分析.结合已发表的中国北方少数民族的数据,在遗传多态性、单倍型组分布状态、Fst遗传距离、系统... 为了从整体上了解拓跋鲜卑的遗传多态性及其对中国北方少数民族起源的影响,对33例东汉到魏晋时期的拓跋鲜卑遗存的线粒体DNA进行了遗传学分析.结合已发表的中国北方少数民族的数据,在遗传多态性、单倍型组分布状态、Fst遗传距离、系统发育和多尺度分析等方面,对拓跋鲜卑和四个北方少数民族(鄂伦春、鄂温克、达斡尔和蒙古)之间的亲缘关系进行了探讨.结果表明:在多态性方面,拓跋鲜卑表现为与北亚类型具有相似性;在和北方少数民族的亲缘关系上,拓跋鲜卑首先表现出与鄂伦春人之间有更近的亲缘关系,其次是蒙古人、鄂温克人,再次是达斡尔人. 展开更多
关键词 拓跋鲜卑 线粒体DNA 遗传多态性 单倍型组 系统发育分析
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人类线粒体DNA变异的检测方法和思路 被引量:8
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作者 姚永刚 孔庆鹏 张亚平 《Zoological Research》 CAS CSCD 北大核心 2001年第4期321-331,共11页
基于线粒体DNA (mtDNA)的研究对于人群源流迁移、线粒体相关疾病病因的探讨和法医鉴定等具有重要意义 ,就检测人线粒体突变的一些常用方法 ,如RFLP、SSO和控制区测序等作一小结和归纳 ,并重点介绍目前mtDNA突变的筛选方法和思路。另外 ... 基于线粒体DNA (mtDNA)的研究对于人群源流迁移、线粒体相关疾病病因的探讨和法医鉴定等具有重要意义 ,就检测人线粒体突变的一些常用方法 ,如RFLP、SSO和控制区测序等作一小结和归纳 ,并重点介绍目前mtDNA突变的筛选方法和思路。另外 ,还总结了近年来对人mtDNA方面的研究结果 ,对世界人群中主要单倍型类群 (haplogroup)特征变异位点和相应的酶切检测引物作了归纳。 展开更多
关键词 MTDNA RFLP SSO 控制区 单倍型类群 人类 线粒体DNA 检测
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贵州瑶族3支系Y-DNA及线粒体DNA序列多态性分析 被引量:7
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作者 褚迅 单可人 +7 位作者 文波 齐晓岚 李毅 吴昌学 刘 赵艳 任锡麟 金力 《遗传》 CAS CSCD 北大核心 2006年第2期153-158,共6页
采用PCRRFLP技术,通过观察由12个单核苷酸多态位点(SNPs)组成的Y染色体单倍型及由9个多态位点组成的线粒体DNA单倍型在贵州瑶族中的分布,分析贵州瑶族父系及母系遗传结构,探讨其起源及迁徙。结果显示,97份男性样本分别属于H7、H8、H9、H... 采用PCRRFLP技术,通过观察由12个单核苷酸多态位点(SNPs)组成的Y染色体单倍型及由9个多态位点组成的线粒体DNA单倍型在贵州瑶族中的分布,分析贵州瑶族父系及母系遗传结构,探讨其起源及迁徙。结果显示,97份男性样本分别属于H7、H8、H9、H114种YDNA单倍型,苗瑶语系特异YDNA单倍型H7的平均频率为92.4%;通过对线粒体DNA基因分型,得到8种单倍型,可归入B4、B5、D4、D5和N单倍型类群中,CoⅡ/tRNALys区域间的9bp缺失平均频率为58.2%。结果提示贵州瑶族父系遗传结构单一,具有典型的苗瑶族群特征,又存在与其他族群的融合。母系遗传结构相对复杂,9bp缺失是贵州瑶族的母系遗传结构特征。 展开更多
关键词 贵州瑶族 Y-DNA单倍型 mtDNA单倍型类群
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25个携带线粒体12S rRNA A1555G突变的中国汉族非综合征型耳聋家系 被引量:6
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作者 彭光华 郑斌娇 +10 位作者 方芳 伍越 梁玲芝 郑静 南奔宇 余啸 唐霄雯 朱翌 吕建新 陈波蓓 管敏鑫 《遗传》 CAS CSCD 北大核心 2013年第1期62-72,共11页
线粒体12S rRNA A1555G突变是引起氨基糖甙类药物诱导的非综合征型耳聋的重要原因之一。文章对收集的25个携带A1555G突变的中国汉族非综合征型耳聋家系进行了临床和分子遗传学评估。结果表明,这25个家系的母系成员在耳聋外显率、听力损... 线粒体12S rRNA A1555G突变是引起氨基糖甙类药物诱导的非综合征型耳聋的重要原因之一。文章对收集的25个携带A1555G突变的中国汉族非综合征型耳聋家系进行了临床和分子遗传学评估。结果表明,这25个家系的母系成员在耳聋外显率、听力损失严重程度和发病年龄上存在较大差异。当包括和不包括氨基糖甙类药物使用史时,耳聋的平均外显率分别为28.1%和21.5%,排除氨基糖甙类药物时,耳聋的平均发病年龄从1~15岁不等。线粒体全序列分析发现了16个新变异,不同的线粒体DNA多态性位点显示这25个家系分别属于东亚人群A、B、D、F、G、M、N和R单倍型,其中线粒体单倍型B的家系耳聋外显率和表现度较其他单倍型高。此外,7个继发突变位点和21个高保守性位点突变可能增加了这些家系的耳聋外显率。GJB2基因上未检测到与耳聋相关的突变,表明在本研究的耳聋家系中,GJB2基因可能没有参与A1555G突变的表型表达。以上各方面提示,线粒体单倍型和其他因素可能参与了这25个家系耳聋患者的表型修饰。 展开更多
关键词 线粒体12S rRNA A1555G突变 非综合征型耳聋 氨基糖甙类抗生素 单倍型
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武汉汉族群体23个Y染色体双等位基因标记遗传多态性研究 被引量:4
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作者 黄代新 杨庆恩 +2 位作者 尹慧 翟仙敦 杨荣芝 《遗传》 CAS CSCD 北大核心 2006年第7期791-798,共8页
筛选汉族群体中具有多态性的Y染色体双等位基因标记并获取其群体遗传学数据。采用片段长度差异等位基因特异性PCR和PAGE技术对武汉地区160名男性汉族无关个体的23个Y染色体双等位基因标记(M7,M9,M50,M88,M89,M95,M111,M117,M11... 筛选汉族群体中具有多态性的Y染色体双等位基因标记并获取其群体遗传学数据。采用片段长度差异等位基因特异性PCR和PAGE技术对武汉地区160名男性汉族无关个体的23个Y染色体双等位基因标记(M7,M9,M50,M88,M89,M95,M111,M117,M119,M121,M122,M134,M159,M164,M175,M214,LINE1,MSY2,RPS4Y711,SRY+465,IMS-Js7-164520,IMS-JST021354和IMS-Js7-003305)进行分型。除M50、M159和M164外,其余20个标记在武汉汉族群体中均具有遗传多态性,其基因多样性(GD)范围为0.0126~0.4855,共检出35种不同单体群组合(Hg1~35),单体群多样性(HD)为0.9471。表明20个Y染色体双等位基因标记组成的单体群具有较高的遗传多样性,在法医学应用和群体进化研究中具有较高的实用价值。 展开更多
关键词 Y染色体 双等位基因标记 遗传多态性 单体群
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线粒体基因ND3、ND4L核苷酸变异与弱精子症相关分析 被引量:5
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作者 李传连 楼哲丰 +4 位作者 黄学锋 吴永根 张李雅 吕建新 金龙金 《中国病理生理杂志》 CAS CSCD 北大核心 2010年第2期362-367,共6页
目的:对弱精子症(AST)精子线粒体DNAND3、ND4L基因突变检测和分析,探索弱精子症致病的分子机制。方法:收集弱精子症患者50例,年龄匹配的对照42例,用密度梯度离心将弱精子症患者和对照组的不同活力精子进行分离,扩增线粒体ND3、ND4L基因... 目的:对弱精子症(AST)精子线粒体DNAND3、ND4L基因突变检测和分析,探索弱精子症致病的分子机制。方法:收集弱精子症患者50例,年龄匹配的对照42例,用密度梯度离心将弱精子症患者和对照组的不同活力精子进行分离,扩增线粒体ND3、ND4L基因,测序和比对,比较弱精子症组和对照组线粒体ND3、ND4L基因核苷酸变异和单体型差异。结果:在弱精子症组和对照组中共检测出22个变异位点,其中A10157G和A10313C未见报道,G10320A、A10398G、T10609C为错义突变。A10398G和C10400T核苷酸变异率在弱精子症组显著低于对照组(P<0.05),G10310A核苷酸变异率在弱精子症组显著高于对照组(P<0.05);单体型分析可见弱精子症组单体型N百分率(33/50)显著高于对照组(14/42)(P<0.05),单体型R9在弱精子症组(15/50)的比例显著高于对照组(4/42)(P<0.05);单体型F1、F2和R9的前向运动精子百分率显著低于单体型M和Mrest(P<0.05)。对弱精子症同一病例不同活力精子进行检测,有2例不同活力的精子的线粒体单体型存在差异,活力好的精子为单体型M,而活力差的精子为单体型N;在50例弱精子症中有2例活力中等和活力差的精子标本中检测出G10310A异质性突变,而在活力好的精子标本中无G10310A突变。结论:线粒体单体型与精子活力可能存在一定的相关性;线粒体DNA10398G-10400T多态性可能是精子活力的有益因素,线粒体DNAG10310A突变可能是精子活力的有害因素。 展开更多
关键词 弱精子症 基因 ND3 基因 ND4L 核苷酸变异 单体型
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尼雅遗址古代居民线粒体DNA研究 被引量:3
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作者 谢承志 李春香 +3 位作者 崔银秋 张全超 周慧 朱泓 《西域研究》 CSSCI 北大核心 2007年第2期51-55,共5页
尼雅遗址是《汉书·西域传》中记载的代遗址之一,^14C测定在距今1480~2635年之间。“精绝”国故址,是丝绸之路沿线保存最完好的古本实验对一例尼雅股骨样本线粒体高可变一区(364bp)进行扩增和测序.并同时做了编码区的限制性... 尼雅遗址是《汉书·西域传》中记载的代遗址之一,^14C测定在距今1480~2635年之间。“精绝”国故址,是丝绸之路沿线保存最完好的古本实验对一例尼雅股骨样本线粒体高可变一区(364bp)进行扩增和测序.并同时做了编码区的限制性片段长度分析,结果显示这一个体属于U3亚型。U3亚型在现代人群中主要集中分布在近东和伊朗,与其他新疆古代人群对比显示:尼雅人群和山普拉人群可能存在一定的母系遗传联系.与潘其凤先生的体质人类学分析结果一致。 展开更多
关键词 古DNA 线粒体DNA 单倍型类群 U3亚型 山普拉人群 尼雅人群 尼雅遗址
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中国蒙古族群体mtDNA测序的聚类分析及其法医学意义 被引量:4
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作者 程宝文 曾发明 +8 位作者 路帆 李貌 翟滇 何玮 邢豫明 鲁靖 陈燕祥 吴道来 肖春杰 《中国法医学杂志》 CSCD 2007年第2期81-84,I0001-I0002,共6页
目的建立一种既节省模板、又能延长测序长度的m tDNA单倍型(群)分析方法,构建中国蒙古族mtDNA单倍型类型关系树。方法用复合扩增、巢式PCR对201名中国蒙古族m tDNA样本进行D-环区、3010~3460、4640~5204、10171~10659和14478~1520... 目的建立一种既节省模板、又能延长测序长度的m tDNA单倍型(群)分析方法,构建中国蒙古族mtDNA单倍型类型关系树。方法用复合扩增、巢式PCR对201名中国蒙古族m tDNA样本进行D-环区、3010~3460、4640~5204、10171~10659和14478~15204编码区域的测序分析,部份样品进行L3953/H4508等区域的测序;根据其多态界定各样本单倍型并进行聚类分析。结果L15996/H107等巢式PCR扩增产物经测序检验结果互不干扰,其分型以A等东亚人群常见的单倍型(群)为主,包括部份HV、K、J、I和U等欧洲人群优势单倍型(群),23个单倍群和共53个单倍型全部归为欧亚人群特有的M和N两大类单倍类群并呈巢式聚类。结论本研究选取的测序区域适用于构建我国各民群的m tDNA单倍型(群);复合扩增、巢式PCR法既节省模板DNA,又延长测序的长度,适用于法医学、考古学研究中的微量样本的检测。 展开更多
关键词 法医物证学 线粒体DNA 单倍型(群) 聚类分析 中国蒙古族
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AZF microdeletions and partial deletions of AZFc region on the Y chromosome in Moroccan men 被引量:22
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作者 Laila Imken Brahim El Houate +10 位作者 Abdelaziz Chafik Halima Nahili Redouane Boulouiz Omar Abidi Elbakkay Chadli Noureddine Louanjli Abdelouhab Elfath Mohammed Hassar Ken McElreavey Abdelhamid Barakat Hassan Rouba 《Asian Journal of Andrology》 SCIE CAS CSCD 2007年第5期674-678,共5页
Aim: To evaluate for the first time the frequency of Y chromosome microdeletions and the occurrence of the partial deletions of AZFc region in Moroccan men, and to discuss the clinical significance of AZF deletions. ... Aim: To evaluate for the first time the frequency of Y chromosome microdeletions and the occurrence of the partial deletions of AZFc region in Moroccan men, and to discuss the clinical significance of AZF deletions. Methods: We screened Y chromosome microdeletions and partial deletions of the AZFc region of a consecutive group of infertile men (n = 149) and controls (100 fertile men, 76 normospermic men). AZFa, AZFb, AZFc and partial deletions of the AZFc region were analyzed by polymerase chain reaction (PCR) according to established protocols. Results: Among the 127 infertile men screened for microdeletion, four subjects were found to have microdeletions: two AZFc deletions and two AZFb+AZFc deletions. All the deletions were found only in azoospermic subjects (4/48, 8.33%). The overall AZFc deletion frequency was low (4/127, 3.15%). AZF microdeletions were not observed in either oligoasthenoteratozoospermia (OATS) or the control. Partial deletions of AZFc (gr/gr) were observed in a total of 7 of the 149 infertile men (4.70%) and 7 partial AZFc deletions (gr/gr) were found in the control group (7/176, 3.98%). In addition, two b2/b3 deletions were identified in two azoospermic subjects (2/149, 1.34%) but not in the control group. Conclusion: Our results suggest that the frequency of Y chromosome AZF microdeletions is elevated in individuals with severe spermatogenic failure and that gr/gr deletions are not associated with spermatogenic failure. 展开更多
关键词 Y microdeletions haplogroupS gr/gr INFERTILITY bi-allelic markers
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Y染色体单倍群与西南地区男性生精障碍的相关性 被引量:4
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作者 冉静 韩婷婷 +6 位作者 丁显平 魏霞 张丽媛 张玉平 李天俊 聂双双 陈林 《遗传》 CAS CSCD 北大核心 2013年第1期73-78,共6页
男性不育中,原发无精、少精是最为重要的因素之一,核型异常和无精子症因子(Azoospermia factor,AZF)微缺失能解释部分原发无精、少精的原因,然而还有许多致病因素尚不清楚。Y染色体作为男性特有的染色体,与男性生殖系统的正常功能密切... 男性不育中,原发无精、少精是最为重要的因素之一,核型异常和无精子症因子(Azoospermia factor,AZF)微缺失能解释部分原发无精、少精的原因,然而还有许多致病因素尚不清楚。Y染色体作为男性特有的染色体,与男性生殖系统的正常功能密切相关。文章主要对Y染色体单倍群这一分子遗传背景与男性原发无精、严重少精症之间是否存在相关性进行探讨,为进一步探索原发无精、严重少精症的遗传学致病原因提供依据和可行的方向。采集265名生精障碍患者(原发无精症患者193名,原发严重少精症患者72名)以及193名正常男性样本的外周血,进行核型分析和AZF缺失分析,以排除有此两类异常的样本。将经过筛选的样本进行Y染色体单倍群分析,并对其单倍群分布情况进行统计分析。分析显示,生精障碍组和对照组分别在D1*、F*、K*、N1*和O3*上有显著性差异(P=0.032,0.022,0.009,0.009,0.017,<0.05)。Y染色体单倍群,这一Y染色体遗传背景与男性原发生精障碍的发生有相关性。 展开更多
关键词 Y染色体单倍群 原发生精障碍 无精子症因子(AZF)
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