Bone tissue engineering may be hindered by underlying osteoporosis because of a decreased osteogenic ability of autologous seed cells and an unfavorably changed microenvironment in these patients. Epigenetic regulatio...Bone tissue engineering may be hindered by underlying osteoporosis because of a decreased osteogenic ability of autologous seed cells and an unfavorably changed microenvironment in these patients. Epigenetic regulation plays an important role in the developmental origins of osteoporosis; however, few studies have investigated the potential of epigenetic therapy to improve or rescue the osteogenic ability of bone marrow mesenchymal stem cells(BMMSCs) under osteoporotic conditions. Here, we investigated pargyline, an inhibitor of lysine-specific demethylase 1(LSD1), which mainly catalyzes the demethylation of the di- and mono-methylation of H3K4. We demonstrated that 1.5 mmol·Lpargyline was the optimal concentration for the osteogenic differentiation of human BMMSCs. Pargyline rescued the osteogenic differentiation ability of mouse BMMSCs under osteoporotic conditions by enhancing the dimethylation level of H3K4 at the promoter regions of osteogenesis-related genes. Moreover, pargyline partially rescued or prevented the osteoporotic conditions in aged or ovariectomized mouse models, respectively. By introducing the concept of epigenetic therapy into the field of osteoporosis, this study demonstrated that LSD1 inhibitors could improve the clinical practice of MSC-based bone tissue engineering and proposes their novel use to treat osteoporosis.展开更多
Objective To investigate the role of lysine-specific demethylase 1 (LSD1) in the process of THP-1 monocyte-to-macrophage differentiation. Methods Quantitative reverse transcription-polymerase chain reaction (qRT-...Objective To investigate the role of lysine-specific demethylase 1 (LSD1) in the process of THP-1 monocyte-to-macrophage differentiation. Methods Quantitative reverse transcription-polymerase chain reaction (qRT-PCR) and Western blotting were performed to analyze the expression of LSD1 and interleukin-6 (IL-6) in THP-1 monocytes and THP-l-derived macrophages. Chromatin immunoprecipitation (ChiP) assay was applied to detect the occupancy of LSD1 and H3K4 methylation at IL-6 promoter during THP-1 monocyte-to-macrophage differentiation. IL-6 mRNA level and H3K4 methylation at IL-6 promoter were analyzed using qRT-PCR and ChiP assay in LSD 1 -knockdown THP- 1 cells treated with 12-O-tetradecanoylphorbol- 13-acetate (TPA) for 0 4, 8, 12, and 24 hours. Fluorescence activated flow cytometry was performed to reveal the percentage of macrophages differentiated from THP- 1 monocytes. Results The expression of LSD1 reduced during THP-1 monocyte-to-macrophage differentiation (P〈0.01). LSD1 occupancy decreased and H3K4 methylation increased at IL-6 promoter during the differentiation. With knockdown of LSD1, H3K4 methylation at IL-6 promoter was found increased after TPA treatment at different times points (all P〈0.05, except 24 hours). The percentage of macrophages increased significantly in theTHP-I cells with LSD1 knockdown (P〈0.05). Conclusions LSD1 is repressed during the monocyte-to-macrophage differentiation of THP-1 cells. Suppression of LSD 1-mediated H3K4 demethylation may be required for THP-1 monocyte-to-macrophage differentiation.展开更多
Lysine-specific demethylase 1 (Lsdl) is associated with transcriptional coregulation via the modulation of histone methylation. The expression pattern and function of zebrafish Lsdl has not, however, been studied. H...Lysine-specific demethylase 1 (Lsdl) is associated with transcriptional coregulation via the modulation of histone methylation. The expression pattern and function of zebrafish Lsdl has not, however, been studied. Here, we describe the pattern of zebrafish Lsdl expression during different development stages. In the zebrafish embryo, Isdl mRNA was present during the early cleavage stage, indicating that maternally derived Lsdl protein is involved in embryonic patterning. During embryogenesis from 0 to 48 hours post-fertilization (hpf), the expression of Isdl mRNA in the embryo was ubiquitous before 12 hpf and then became restricted to the antedor of the embryo (particularly in the brain) from 24 hpf to 72 hpf. Inhibition of Lsdl activity (by exposure to tranylcypromine) or knockdown of Isdl expression (by morpholino antisense oligonucleotide injection) led to the loss of cells in the brain and to a dramatic downregulatJon of neural genes, including gad65, gad75, and reelin, but not hey1. These findings indicate an important role of Lsdl during nervous system development in zebrafish.展开更多
LSD1 (KDM1 under the new nomenclature) was the first identified lysine-specific histone demethylase belonging to the flavin-dependent amine oxidase family. Here, we report that AOF1 (KDM1B under the new nomenclatur...LSD1 (KDM1 under the new nomenclature) was the first identified lysine-specific histone demethylase belonging to the flavin-dependent amine oxidase family. Here, we report that AOF1 (KDM1B under the new nomenclature), a mammalian protein related to LSD1, also possesses histone demethylase activity with specificity for H3K4mel and H3K4me2. Like LSD1, the highly conserved SWIRM domain is required for its enzymatic activity. However, AOF1 differs from LSD1 in several aspects. First, AOF1 does not appear to form stable protein complexes containing histone deacetylases. Second, AOF1 is found to localize to chromosomes during the mitotic phase of the cell cycle, whereas LSD1 does not. Third, AOF1 represses transcription when tethered to DNA and this repression activity is independent of its demethylase activity. Structural and functional analyses identified its unique N-terminal Zf-CW domain as essential for the demethylase activity-independent repression function. Collectively, our study identifies AOF1 as the second histone demethylase in the family of flavin-dependent amine oxidases and reveals a demethylase-independent repression function of AOF1.展开更多
BACKGROUND Esophageal cancer is a malignant tumor of the digestive tract that is difficult to diagnose early.CPI-455 has been reported to inhibit various cancers,but its role in esophageal squamous cell carcinoma(ESCC...BACKGROUND Esophageal cancer is a malignant tumor of the digestive tract that is difficult to diagnose early.CPI-455 has been reported to inhibit various cancers,but its role in esophageal squamous cell carcinoma(ESCC)is unknown.AIM To investigate the effects and mechanism of the lysine demethylase 5C inhibitor,CPI-455,on ESCC cells.METHODS A methyl tetrazolium assay was used to detect the inhibitory effect of CPI-455 on the proliferation of Eca-109 cells.Apoptosis,reactive oxygen species(ROS),and mitochondrial membrane potential were assessed by flow cytometry.Laser confocal scanning and transmission electron microscopy were used to observe changes in Eca-109 cell morphology.The protein expression of P53,Bax,lysinespecific demethylase 5C(KDM5C),cleaved Caspase-9,and cleaved Caspase-3 were assayed by western blotting.RESULTS Compared with the control group,CPI-455 significantly inhibited Eca-109 cell proliferation.Gemcitabine inhibited Eca-109 cell proliferation in a concentrationand time-dependent manner.CPI-455 caused extensive alteration of the mitochondria,which appeared to have become atrophied.The cell membrane was weakly stained and the cytoplasmic structures were indistinct and disorganized,with serious cavitation when viewed by transmission electron microscopy.The flow cytometry and western blot results showed that,compared with the control group,the mitochondrial membrane potential was decreased and depolarized in Eca-109 cells treated with CPI-455.CPI-455 significantly upregulated the ROS content,P53,Bax,Caspase-9,and Caspase-3 protein expression in Eca-109 cells,whereas KDM5C expression was downregulated.CONCLUSION CPI-455 inhibited Eca-109 cell proliferation via mitochondrial apoptosis by regulating the expression of related genes.展开更多
ALKBH1 was recently discovered as a demethylase for DNA N6-methyladenine (N6-mA), a new epigenetic modification, and interacts with the core transcriptional pluripotency network of embryonic stem cells. However, the...ALKBH1 was recently discovered as a demethylase for DNA N6-methyladenine (N6-mA), a new epigenetic modification, and interacts with the core transcriptional pluripotency network of embryonic stem cells. However, the role of ALKBH1 and DNA N6-mA in regulating osteogenic differentiation is largely unknown. In this study, we demonstrated that the expression of ALKBH1 in human mesenchymal stem cells (MSCs) was upregulated during osteogenic induction. Knockdown of ALKBH1 increased the genomic DNA N6-mA levels and significantly reduced the expression of osteogenic-related genes, alkaline phosphatase activity, and mineralization. ALKBHl-depleted MSCs also exhibited a restricted capacity for bone formation in vivo. By contrast, the ectopic overexpression of ALKBH1 enhanced osteoblastic differentiation. Mechanically, we found that the depletion of ALKBH1 resulted in the accumulation of N6-mA on the promoter region of ATF4, which subsequently silenced ATF4 transcription. In addition, restoring the expression of ATP by adenovirus-mediated transduction successfully rescued osteogenic differentiation. Taken together, our results demonstrate that ALKBH1 is indispensable for the osteogenic differentiation of MSCs and indicate that DNA N6-mA modifications area new mechanism for the epigenetic regulation of stem cell differentiation.展开更多
Osteoarthritis(OA)is a prevalent joint disease with no effective treatment strategies.Aberrant mechanical stimuli was demonstrated to be an essential factor for OA pathogenesis.Although multiple studies have detected ...Osteoarthritis(OA)is a prevalent joint disease with no effective treatment strategies.Aberrant mechanical stimuli was demonstrated to be an essential factor for OA pathogenesis.Although multiple studies have detected potential regulatory mechanisms underlying OA and have concentrated on developing novel treatment strategies,the epigenetic control of OA remains unclear.Histone demethylase JMJD3 has been reported to mediate multiple physiological and pathological processes,including cell differentiation,proliferation,autophagy,and apoptosis.However,the regulation of JMJD3 in aberrant force-related OA and its mediatory effect on disease progression are still unknown.In this work,we confirmed the upregulation of JMJD3 in aberrant forceinduced cartilage injury in vitro and in vivo.Functionally,inhibition of JMJD3 by its inhibitor,GSK-J4,or downregulation of JMJD3 by adenovirus infection of sh-JMJD3 could alleviate the aberrant force-induced chondrocyte injury.Mechanistic investigation illustrated that aberrant force induces JMJD3 expression and then demethylates H3K27me3 at the NR4A1 promoter to promote its expression.Further experiments indicated that NR4A1 can regulate chondrocyte apoptosis,cartilage degeneration,extracellular matrix degradation,and inflammatory responses.In vivo,anterior cruciate ligament transection(ACLT)was performed to construct an OA model,and the therapeutic effect of GSK-J4 was validated.More importantly,we adopted a peptide-si RNA nanoplatform to deliver si-JMJD3 into articular cartilage,and the severity of joint degeneration was remarkably mitigated.Taken together,our findings demonstrated that JMJD3 is flow-responsive and epigenetically regulates OA progression.Our work provides evidences for JMJD3 inhibition as an innovative epigenetic therapy approach for joint diseases by utilizing p5RHH-si RNA nanocomplexes.展开更多
The dynamic RNA modifications have been viewed as new posttranscriptional regulator in modulating gene expression as well as in a broad range of physiological processes.N^(1)-methyladenosine(m^(1)A)is one of the most ...The dynamic RNA modifications have been viewed as new posttranscriptional regulator in modulating gene expression as well as in a broad range of physiological processes.N^(1)-methyladenosine(m^(1)A)is one of the most prevalent modifications existing in multiple types of RNAs.In-depth investigation of the functions of m^(1)A requires the site-specific assessment of m^(1)A stoichiometry in RNA.Herein,we established a demethylase-assisted method(DA-m^(1)A)for the site-specific detection and quantification of m^(1)A in RNA.N^(1)-methyl group in m^(1)A could result in the stalling of reverse transcription at m^(1)A site,thus producing the truncated cDNA.E.coli AlkB is a demethylase that can demethylate m^(1)A to produce adenine in RNA,thus generating full-length cDNA from AlkB-treated RNA.Evaluation of the produced amounts of full-length cDNA by quantitative real-time PCR can achieve the site-specific detection and quantification of m^(1)A in RNA.With the DA-m^(1)A method,we examined and successfully confirmed the previously well-characterized m^(1)A sites in various types of RNAs with low false positive rate.In addition,we found that the level of m^(1)A was significantly decreased at the bromodomain containing 2(BRD2)mRNA position 1674 and CST telomere replication complex component 1(CTC1)mRNA position 5643 in human hepatocellular carcinoma tissues.The results suggest that these two m^(1)A sites in mRNA may be involved in liver tumorigenesis.Taken together,the DA-m^(1)A method is simple and enables the rapid,cost-effective,and site-specific detection and quantification of m^(1)A in RNA,which provides a valuable tool to decipher the functions of m^(1)A in human diseases.展开更多
Cancer stem cells (CSCs) are tumor initiating cells within the tumor mass;that play a critical role in cancer pathogenesis. CSCs regulate cancer cell survival, metastatic potential, resistance to conventional radio-ch...Cancer stem cells (CSCs) are tumor initiating cells within the tumor mass;that play a critical role in cancer pathogenesis. CSCs regulate cancer cell survival, metastatic potential, resistance to conventional radio-chemotherapy, disease relapse and poor prognosis. Recent studies have established that the drug resistant cancers and cancer cell lines possess high stem cell like traits compared to their drug sensitive counterparts. Histone demethylases are recently been linked to drug induced reversible tolerant state in cancers. Lysine histone demethylases are enzymes those demethylate lysines in histones and can act as transcriptional repressors or activators. Apart from histones other cellular proteins like E2F1, Rb, STAT3 and p53 are also regulated by methylation and demethylation cycles. In cancer cells these enzymes regulate cell survival, migration, invasion, and proliferation. This review summarizes the current progress of research on the role of histone demethylases in supporting drug tolerant cancer stem cell state and their potential as a drug target.展开更多
组蛋白赖氨酸特异性去甲基化酶1(histone lysine specific demethylase 1,LSD1)是一个黄素腺嘌呤二核苷酸(FAD)依赖的氨基氧化酶,能够特异性去除组蛋白H3K4和H3K9的单、双甲基化。利用RNA干扰技术和小分子LSD1抑制剂调节LSD1的表达量和...组蛋白赖氨酸特异性去甲基化酶1(histone lysine specific demethylase 1,LSD1)是一个黄素腺嘌呤二核苷酸(FAD)依赖的氨基氧化酶,能够特异性去除组蛋白H3K4和H3K9的单、双甲基化。利用RNA干扰技术和小分子LSD1抑制剂调节LSD1的表达量和活性,能够控制肿瘤细胞的增殖、转移和侵袭。同时,由于LSD1在多种肿瘤中高表达,靶向LSD1的抗肿瘤治疗方案表现出较高的选择性和较低的毒副作用。因此,LSD1可能成为表观遗传学抗肿瘤药物的新靶点。本文对近年来LSD1的结构、功能研究及最新的LSD1抑制剂研究进展做一综述和分析。展开更多
本研究探讨组蛋白去甲基化酶赖氨酸特异性去甲基化酶1(lysine specific demethylase 1,LSD1)在急性白血病的表达及其临床意义。采用Western blot方法半定量检测LSD1在HL-60和SHI-1白血病细胞株、不同病情(初诊、完全缓解、复发)急性白血...本研究探讨组蛋白去甲基化酶赖氨酸特异性去甲基化酶1(lysine specific demethylase 1,LSD1)在急性白血病的表达及其临床意义。采用Western blot方法半定量检测LSD1在HL-60和SHI-1白血病细胞株、不同病情(初诊、完全缓解、复发)急性白血病(acute leukemia,AL)患者及非恶性血液病对照者骨髓单个核细胞的表达水平。随访收集AL患者的临床资料,分析LSD1表达与临床预后的关系。结果表明,HL-60细胞和SHI-1细胞LSD1均呈阳性高表达,LSD1相对含量(LSD1/β-actin灰度比)分别为4.647±3.840和1.628±0.185(n=4);72例AL患者LSD1表达程度差异较大,阳性率为56.9%(41/72),LSD1相对含量平均为1.053±1.976;17例非恶性血液病对照组LSD1阳性率为0%,LSD1相对含量为0.004±0.012。LSD1阳性率在急性髓系白血病(AML)或急性淋巴细胞白血病(ALL)患者初诊组(90.4%,77.8%)与难治/复发组(100%,100%)均高于完全缓解(CR)组(4.7%,0%)(p=0.000);LSD1相对含量在AML与ALL患者初诊组之间(1.177±1.646,1.275±1.845)、难治/复发组之间(2.050±2.470,4.107±3.676)或CR组之间(0.029±0.033,0.019±0.024)差异无统计学意义(p>0.05);AL患者LSD1阳性率在初诊组(84.6%)与难治/复发组(100%)均高于CR组(3.8%),LSD1相对含量在初诊组(1.274±1.760)、难治/复发组(3.359±3.319)及CR组(0.027±0.031)均高于对照组(p<0.01),其中难治/复发组高于初诊组与CR组(p<0.01),初诊组高于CR组(p<0.01)。结论:LSD1过高表达与AL难治/复发有关,其表达水平能反映AL患者的病情,可成为对AL预后有提示作用的生物学标志。展开更多
Epithelial-mesenchymal transition (EMT) is a plastic and reversible process, essential for development and tissue homeostasis. Under pathological conditions, EMT causes induction of tumor growth, angiogenesis and meta...Epithelial-mesenchymal transition (EMT) is a plastic and reversible process, essential for development and tissue homeostasis. Under pathological conditions, EMT causes induction of tumor growth, angiogenesis and metastasis. According to its reversible nature, the EMT program is associated with vast epigenetic changes. Targeting the epigenetic network that controls the EMT pathway in disease progression is a novel promising strategy to fight cancer metastasis. The impact of alterations in histone methylation in cancer has led to the identification of histone methyltransferases and demethylases as promising novel targets for therapy. Specifically, the lysine specific demethylase 1 (LSD1, also known as KDM1A) plays a pivotal role in the regulation of EMT. Here we present an overview of the causative role of LSD1 in the EMT process, summarizing recent findings on its emerging functions in cell migration and invasion in breast cancer.展开更多
目的检测赖氨酸特异性去甲基化酶1(Lysine specific demethylase 1,LSD1)在食管鳞癌以及正常食管组织中的表达,并探讨LSD1与食管鳞癌临床特征、肿瘤增殖及凋亡等的关系。方法免疫组化S-P染色法检测86例食管鳞癌组织及29例正常食管组织中...目的检测赖氨酸特异性去甲基化酶1(Lysine specific demethylase 1,LSD1)在食管鳞癌以及正常食管组织中的表达,并探讨LSD1与食管鳞癌临床特征、肿瘤增殖及凋亡等的关系。方法免疫组化S-P染色法检测86例食管鳞癌组织及29例正常食管组织中LSD1、增殖相关抗原Ki67的表达情况,TUNEL检测食管鳞癌组织凋亡情况,并分析LSD1表达与患者临床资料、预后以及增殖和凋亡的关系。结果 LSD1在食管鳞癌组织中阳性率(89.5%)明显高于正常组织(51.7%),且与患者淋巴结转移相关(P<0.05),并能明显影响患者的预后(P<0.05),LSD1的表达与肿瘤增殖有关,但与凋亡无关。结论 LSD1在食管鳞癌中高表达且与患者预后相关,可能成为食管鳞癌中值得研究的治疗靶标。展开更多
基金supported by grants from the National Natural Science Foundation of China(81200763 to WG and 81070809 to YZ)the Program for New Century Excellent Talents(NCET)at the University from Ministry of Education of China(NCET-11-0026)+1 种基金the PKU School of Stomatology for Talented Young Investigators(PKUSS20150107)the Construction Program for the National Key Clinical Specialty from the National Health and Family Planning Commission of China(2011)
文摘Bone tissue engineering may be hindered by underlying osteoporosis because of a decreased osteogenic ability of autologous seed cells and an unfavorably changed microenvironment in these patients. Epigenetic regulation plays an important role in the developmental origins of osteoporosis; however, few studies have investigated the potential of epigenetic therapy to improve or rescue the osteogenic ability of bone marrow mesenchymal stem cells(BMMSCs) under osteoporotic conditions. Here, we investigated pargyline, an inhibitor of lysine-specific demethylase 1(LSD1), which mainly catalyzes the demethylation of the di- and mono-methylation of H3K4. We demonstrated that 1.5 mmol·Lpargyline was the optimal concentration for the osteogenic differentiation of human BMMSCs. Pargyline rescued the osteogenic differentiation ability of mouse BMMSCs under osteoporotic conditions by enhancing the dimethylation level of H3K4 at the promoter regions of osteogenesis-related genes. Moreover, pargyline partially rescued or prevented the osteoporotic conditions in aged or ovariectomized mouse models, respectively. By introducing the concept of epigenetic therapy into the field of osteoporosis, this study demonstrated that LSD1 inhibitors could improve the clinical practice of MSC-based bone tissue engineering and proposes their novel use to treat osteoporosis.
基金Supported by National Natural Science Foundation of China(31271227,30721063,81161120551)National Basic Research Program of China(973 Program,2011CB503902,2011CB965203)
文摘Objective To investigate the role of lysine-specific demethylase 1 (LSD1) in the process of THP-1 monocyte-to-macrophage differentiation. Methods Quantitative reverse transcription-polymerase chain reaction (qRT-PCR) and Western blotting were performed to analyze the expression of LSD1 and interleukin-6 (IL-6) in THP-1 monocytes and THP-l-derived macrophages. Chromatin immunoprecipitation (ChiP) assay was applied to detect the occupancy of LSD1 and H3K4 methylation at IL-6 promoter during THP-1 monocyte-to-macrophage differentiation. IL-6 mRNA level and H3K4 methylation at IL-6 promoter were analyzed using qRT-PCR and ChiP assay in LSD 1 -knockdown THP- 1 cells treated with 12-O-tetradecanoylphorbol- 13-acetate (TPA) for 0 4, 8, 12, and 24 hours. Fluorescence activated flow cytometry was performed to reveal the percentage of macrophages differentiated from THP- 1 monocytes. Results The expression of LSD1 reduced during THP-1 monocyte-to-macrophage differentiation (P〈0.01). LSD1 occupancy decreased and H3K4 methylation increased at IL-6 promoter during the differentiation. With knockdown of LSD1, H3K4 methylation at IL-6 promoter was found increased after TPA treatment at different times points (all P〈0.05, except 24 hours). The percentage of macrophages increased significantly in theTHP-I cells with LSD1 knockdown (P〈0.05). Conclusions LSD1 is repressed during the monocyte-to-macrophage differentiation of THP-1 cells. Suppression of LSD 1-mediated H3K4 demethylation may be required for THP-1 monocyte-to-macrophage differentiation.
基金the National Natural Science Foundation of China, No.81102643the Natural Science Foundation of the Higher Education Institutions of Jiangsu Province, No.10KJB310010+1 种基金the Science Foundationof Zhejiang Province, No.Y2100917the Science Foundation of Anhui Province, No.1208085MB26
文摘Lysine-specific demethylase 1 (Lsdl) is associated with transcriptional coregulation via the modulation of histone methylation. The expression pattern and function of zebrafish Lsdl has not, however, been studied. Here, we describe the pattern of zebrafish Lsdl expression during different development stages. In the zebrafish embryo, Isdl mRNA was present during the early cleavage stage, indicating that maternally derived Lsdl protein is involved in embryonic patterning. During embryogenesis from 0 to 48 hours post-fertilization (hpf), the expression of Isdl mRNA in the embryo was ubiquitous before 12 hpf and then became restricted to the antedor of the embryo (particularly in the brain) from 24 hpf to 72 hpf. Inhibition of Lsdl activity (by exposure to tranylcypromine) or knockdown of Isdl expression (by morpholino antisense oligonucleotide injection) led to the loss of cells in the brain and to a dramatic downregulatJon of neural genes, including gad65, gad75, and reelin, but not hey1. These findings indicate an important role of Lsdl during nervous system development in zebrafish.
基金We thank Dr Ramin Shiekhattar (Wistar Institute, USA) for the baculoviruses expressing Flag-LSD1 and Drs Jianguo Song and Degui Chen (Shanghai Institute of Biochemistry and Cell Biol- ogy, China) for anti-HDAC1 antibody and H3K36me2 antibody, respectively. This study was partially supported by grants from the National Natural Science Foundation of China (90919025, 30871381), the Ministry of Science and Technology of China (2009CB918402, 2009CB825601) and the Research Platform for Cell Signaling Networks from the Science and Technology Com- mission of Shanghai Municipality (06DZ22923).
文摘LSD1 (KDM1 under the new nomenclature) was the first identified lysine-specific histone demethylase belonging to the flavin-dependent amine oxidase family. Here, we report that AOF1 (KDM1B under the new nomenclature), a mammalian protein related to LSD1, also possesses histone demethylase activity with specificity for H3K4mel and H3K4me2. Like LSD1, the highly conserved SWIRM domain is required for its enzymatic activity. However, AOF1 differs from LSD1 in several aspects. First, AOF1 does not appear to form stable protein complexes containing histone deacetylases. Second, AOF1 is found to localize to chromosomes during the mitotic phase of the cell cycle, whereas LSD1 does not. Third, AOF1 represses transcription when tethered to DNA and this repression activity is independent of its demethylase activity. Structural and functional analyses identified its unique N-terminal Zf-CW domain as essential for the demethylase activity-independent repression function. Collectively, our study identifies AOF1 as the second histone demethylase in the family of flavin-dependent amine oxidases and reveals a demethylase-independent repression function of AOF1.
基金Young Talents Project of Hubei Provincial Health Commission,No.WJ2019H449.
文摘BACKGROUND Esophageal cancer is a malignant tumor of the digestive tract that is difficult to diagnose early.CPI-455 has been reported to inhibit various cancers,but its role in esophageal squamous cell carcinoma(ESCC)is unknown.AIM To investigate the effects and mechanism of the lysine demethylase 5C inhibitor,CPI-455,on ESCC cells.METHODS A methyl tetrazolium assay was used to detect the inhibitory effect of CPI-455 on the proliferation of Eca-109 cells.Apoptosis,reactive oxygen species(ROS),and mitochondrial membrane potential were assessed by flow cytometry.Laser confocal scanning and transmission electron microscopy were used to observe changes in Eca-109 cell morphology.The protein expression of P53,Bax,lysinespecific demethylase 5C(KDM5C),cleaved Caspase-9,and cleaved Caspase-3 were assayed by western blotting.RESULTS Compared with the control group,CPI-455 significantly inhibited Eca-109 cell proliferation.Gemcitabine inhibited Eca-109 cell proliferation in a concentrationand time-dependent manner.CPI-455 caused extensive alteration of the mitochondria,which appeared to have become atrophied.The cell membrane was weakly stained and the cytoplasmic structures were indistinct and disorganized,with serious cavitation when viewed by transmission electron microscopy.The flow cytometry and western blot results showed that,compared with the control group,the mitochondrial membrane potential was decreased and depolarized in Eca-109 cells treated with CPI-455.CPI-455 significantly upregulated the ROS content,P53,Bax,Caspase-9,and Caspase-3 protein expression in Eca-109 cells,whereas KDM5C expression was downregulated.CONCLUSION CPI-455 inhibited Eca-109 cell proliferation via mitochondrial apoptosis by regulating the expression of related genes.
基金supported by grants from the National Natural Science Foundation of China (No.81271178 and 81470777)
文摘ALKBH1 was recently discovered as a demethylase for DNA N6-methyladenine (N6-mA), a new epigenetic modification, and interacts with the core transcriptional pluripotency network of embryonic stem cells. However, the role of ALKBH1 and DNA N6-mA in regulating osteogenic differentiation is largely unknown. In this study, we demonstrated that the expression of ALKBH1 in human mesenchymal stem cells (MSCs) was upregulated during osteogenic induction. Knockdown of ALKBH1 increased the genomic DNA N6-mA levels and significantly reduced the expression of osteogenic-related genes, alkaline phosphatase activity, and mineralization. ALKBHl-depleted MSCs also exhibited a restricted capacity for bone formation in vivo. By contrast, the ectopic overexpression of ALKBH1 enhanced osteoblastic differentiation. Mechanically, we found that the depletion of ALKBH1 resulted in the accumulation of N6-mA on the promoter region of ATF4, which subsequently silenced ATF4 transcription. In addition, restoring the expression of ATP by adenovirus-mediated transduction successfully rescued osteogenic differentiation. Taken together, our results demonstrate that ALKBH1 is indispensable for the osteogenic differentiation of MSCs and indicate that DNA N6-mA modifications area new mechanism for the epigenetic regulation of stem cell differentiation.
基金supported by National Natural Science Foundation of China(11932012,81870790 and 31801233)Science and Technology Commission of Shanghai Municipality(18441903600)+1 种基金Clinical Research Plan of SHDC(No.SHDC2020CR3009A)Innovative Research Team of High-level Local Universities in Shanghai(SSMU-ZDCX20180902)。
文摘Osteoarthritis(OA)is a prevalent joint disease with no effective treatment strategies.Aberrant mechanical stimuli was demonstrated to be an essential factor for OA pathogenesis.Although multiple studies have detected potential regulatory mechanisms underlying OA and have concentrated on developing novel treatment strategies,the epigenetic control of OA remains unclear.Histone demethylase JMJD3 has been reported to mediate multiple physiological and pathological processes,including cell differentiation,proliferation,autophagy,and apoptosis.However,the regulation of JMJD3 in aberrant force-related OA and its mediatory effect on disease progression are still unknown.In this work,we confirmed the upregulation of JMJD3 in aberrant forceinduced cartilage injury in vitro and in vivo.Functionally,inhibition of JMJD3 by its inhibitor,GSK-J4,or downregulation of JMJD3 by adenovirus infection of sh-JMJD3 could alleviate the aberrant force-induced chondrocyte injury.Mechanistic investigation illustrated that aberrant force induces JMJD3 expression and then demethylates H3K27me3 at the NR4A1 promoter to promote its expression.Further experiments indicated that NR4A1 can regulate chondrocyte apoptosis,cartilage degeneration,extracellular matrix degradation,and inflammatory responses.In vivo,anterior cruciate ligament transection(ACLT)was performed to construct an OA model,and the therapeutic effect of GSK-J4 was validated.More importantly,we adopted a peptide-si RNA nanoplatform to deliver si-JMJD3 into articular cartilage,and the severity of joint degeneration was remarkably mitigated.Taken together,our findings demonstrated that JMJD3 is flow-responsive and epigenetically regulates OA progression.Our work provides evidences for JMJD3 inhibition as an innovative epigenetic therapy approach for joint diseases by utilizing p5RHH-si RNA nanocomplexes.
基金supported by the National Key R&D Program of China(Nos.2022YFC3400700 and 2022YFA0806600)the National Natural Science Foundation of China(Nos.22277093,22074110,21721005 and 22207090)+1 种基金the Interdisciplinary Innovative Talents Foundation from Renmin Hospital of Wuhan University(No.JCRCGW-2022-008)the Translational Medicine and Interdisciplinary Research Joint Fund of Zhongnan Hospital of Wuhan University(No.ZNJC202208)。
文摘The dynamic RNA modifications have been viewed as new posttranscriptional regulator in modulating gene expression as well as in a broad range of physiological processes.N^(1)-methyladenosine(m^(1)A)is one of the most prevalent modifications existing in multiple types of RNAs.In-depth investigation of the functions of m^(1)A requires the site-specific assessment of m^(1)A stoichiometry in RNA.Herein,we established a demethylase-assisted method(DA-m^(1)A)for the site-specific detection and quantification of m^(1)A in RNA.N^(1)-methyl group in m^(1)A could result in the stalling of reverse transcription at m^(1)A site,thus producing the truncated cDNA.E.coli AlkB is a demethylase that can demethylate m^(1)A to produce adenine in RNA,thus generating full-length cDNA from AlkB-treated RNA.Evaluation of the produced amounts of full-length cDNA by quantitative real-time PCR can achieve the site-specific detection and quantification of m^(1)A in RNA.With the DA-m^(1)A method,we examined and successfully confirmed the previously well-characterized m^(1)A sites in various types of RNAs with low false positive rate.In addition,we found that the level of m^(1)A was significantly decreased at the bromodomain containing 2(BRD2)mRNA position 1674 and CST telomere replication complex component 1(CTC1)mRNA position 5643 in human hepatocellular carcinoma tissues.The results suggest that these two m^(1)A sites in mRNA may be involved in liver tumorigenesis.Taken together,the DA-m^(1)A method is simple and enables the rapid,cost-effective,and site-specific detection and quantification of m^(1)A in RNA,which provides a valuable tool to decipher the functions of m^(1)A in human diseases.
文摘Cancer stem cells (CSCs) are tumor initiating cells within the tumor mass;that play a critical role in cancer pathogenesis. CSCs regulate cancer cell survival, metastatic potential, resistance to conventional radio-chemotherapy, disease relapse and poor prognosis. Recent studies have established that the drug resistant cancers and cancer cell lines possess high stem cell like traits compared to their drug sensitive counterparts. Histone demethylases are recently been linked to drug induced reversible tolerant state in cancers. Lysine histone demethylases are enzymes those demethylate lysines in histones and can act as transcriptional repressors or activators. Apart from histones other cellular proteins like E2F1, Rb, STAT3 and p53 are also regulated by methylation and demethylation cycles. In cancer cells these enzymes regulate cell survival, migration, invasion, and proliferation. This review summarizes the current progress of research on the role of histone demethylases in supporting drug tolerant cancer stem cell state and their potential as a drug target.
文摘组蛋白赖氨酸特异性去甲基化酶1(histone lysine specific demethylase 1,LSD1)是一个黄素腺嘌呤二核苷酸(FAD)依赖的氨基氧化酶,能够特异性去除组蛋白H3K4和H3K9的单、双甲基化。利用RNA干扰技术和小分子LSD1抑制剂调节LSD1的表达量和活性,能够控制肿瘤细胞的增殖、转移和侵袭。同时,由于LSD1在多种肿瘤中高表达,靶向LSD1的抗肿瘤治疗方案表现出较高的选择性和较低的毒副作用。因此,LSD1可能成为表观遗传学抗肿瘤药物的新靶点。本文对近年来LSD1的结构、功能研究及最新的LSD1抑制剂研究进展做一综述和分析。
文摘Epithelial-mesenchymal transition (EMT) is a plastic and reversible process, essential for development and tissue homeostasis. Under pathological conditions, EMT causes induction of tumor growth, angiogenesis and metastasis. According to its reversible nature, the EMT program is associated with vast epigenetic changes. Targeting the epigenetic network that controls the EMT pathway in disease progression is a novel promising strategy to fight cancer metastasis. The impact of alterations in histone methylation in cancer has led to the identification of histone methyltransferases and demethylases as promising novel targets for therapy. Specifically, the lysine specific demethylase 1 (LSD1, also known as KDM1A) plays a pivotal role in the regulation of EMT. Here we present an overview of the causative role of LSD1 in the EMT process, summarizing recent findings on its emerging functions in cell migration and invasion in breast cancer.