Omega-3 polyunsaturated fatty acids(n-3 PUFAs),particularly docosahexaenoic acid(22:6n-3,DHA),play crucial roles in the reproductive health of vertebrates,including humans.Nevertheless,the underlying mechanism related...Omega-3 polyunsaturated fatty acids(n-3 PUFAs),particularly docosahexaenoic acid(22:6n-3,DHA),play crucial roles in the reproductive health of vertebrates,including humans.Nevertheless,the underlying mechanism related to this phenomenon remains largely unknown.In this study,we employed two zebrafish genetic models,i.e.,elovl2^(-/-)mutant as an endogenous DHAdeficient model and fat1(omega-3 desaturase encoding gene)transgenic zebrafish as an endogenous DHA-rich model,to investigate the effects of DHA on oocyte maturation and quality.Results show that the elovl2^(-/-)mutants had much lower fecundity and poorer oocyte quality than the wild-type controls,while the fat1 zebrafish had higher fecundity and better oocyte quality than wildtype controls.DHA deficiency in elovl2^(-/-)embryos led to defects in egg activation,poor microtubule stability,and reduced pregnenolone levels.Further study revealed that DHA promoted pregnenolone synthesis by enhancing transcription of cyp11a1,which encodes the cholesterol side-chain cleavage enzyme,thereby stabilizing microtubule assembly during oogenesis.In turn,the hypothalamic-pituitary-gonadal axis was enhanced by DHA.In conclusion,using two unique genetic models,our findings demonstrate that endogenously synthesized DHA promotes oocyte maturation and quality by promoting pregnenolone production via transcriptional regulation of cyp11a1.展开更多
Members of the family Scenedesmaceae are some of the most common algal taxa in inland ecosystems,and they are widely distributed in freshwaters,aerial,and sub-aerial habitats.With the continuous updating of methods,th...Members of the family Scenedesmaceae are some of the most common algal taxa in inland ecosystems,and they are widely distributed in freshwaters,aerial,and sub-aerial habitats.With the continuous updating of methods,the classic morphological taxonomy of this family needs to be revised.In recent years,many genera of Scenedesmaceae have been established via the use of molecular methods.The phylogenetic relationships within Scenedesmaceae were analyzed using different molecular markers and morphological data,and the new freshwater genus Coccoidesmus Wang,Hou et Liu gen.nov.was described.Two new species in this genus were also described.Phylogenetic analysis based on tufA genes revealed that the new genus formed an independent clade closely related to Comasiella.However,these two genera are characterized by significant morphological differences in colony arrangement and cell shape.The chloroplast genome of the type species was assembled and annotated,and analyses of genome structure and sequences were conducted.More genome data could help clarify the phylogenetic relationships within this family.展开更多
Environmental DNA(eDNA)has been used as an important tool for fish diversity analysis,which can greatly solve the problems in traditional survey methodology.However,little work has been done on the actual monitoring a...Environmental DNA(eDNA)has been used as an important tool for fish diversity analysis,which can greatly solve the problems in traditional survey methodology.However,little work has been done on the actual monitoring accuracy of eDNA.In this study,we analyzed the current status of fish resources in Erhai Lake in Yunnan,SW China,by dividing the lake into three sectors according to habitat differences,and compared the results of eDNA and traditional capture methods to investigate the shortcomings of the current analysis of eDNA results.A total of 27 fish species were detected by eDNA and traditional capture methods,including 20 and 19 fish species,respectively,and additional differences in fish composition between the two methods.The alpha diversity showed higher fish abundance and lower fish diversity by eDNA method compared to the traditional capture method,demonstrating that eDNA was not superior for use in fish diversity analysis.Fish community similarity analysis showed that community differences were generally significant for eDNA(P<0.05).RDA analysis indicated that environmental factors did not significantly affect fish communities monitored by the eDNA method.However,water temperature,aquatic plants,and water depth had significant(P<0.05)effects on fish communities in the traditional capture method,suggesting that eDNA results are insensitive to the effects of environmental factors.Our results illustrate the effectiveness of eDNA in fish identification and the issues in quantification compared to traditional capture methods.Therefore,combining eDNA with traditional methods is a more effective method for analyzing eDNA metabarcoding,following which the protocols of both quantitative methods can be designed to explore the regularity of eDNA quantification.展开更多
During our investigation of diatom biodiversity in Xizang,two species exhibited unique morphological features discriminative from all previously known genera.Herein we describe these two species and describe as new th...During our investigation of diatom biodiversity in Xizang,two species exhibited unique morphological features discriminative from all previously known genera.Herein we describe these two species and describe as new the genus,Spargeria gen.nov.The new genus features narrow to wide rectangular valves,narrow valve mantles,filiform raphe branches that occur on the valve face only,terminal raphe fissures straight or slightly deflected to same side,bow-tie shaped central areas,chambered striae present on the valve face only,being absent from the mantle,wider striae near the axial area and very narrow near the margin,multiseriate striae with small and round areolae that are occluded externally.Comparatively,Spargeria zhuii sp.nov.has larger and robust valves,radiate striae,with one divergent stria near the apices,while Spargeria chenia sp.nov.is smaller,with narrow valves,striae slightly radiate in the middle,becoming convergent or parallel near apices.This new genus belongs to the family Pinnulariaceae,and it was compared and contrasted with other genera of this family.Our work suggests the need for continued studies to document the biodiversity of diatoms in Xizang.展开更多
Macrophyte habitats exhibit remarkable heterogeneity,encompassing the spatial variation of abiotic and biotic components such as changes in water conditions and weather as well as anthropogenic stressors.Environmental...Macrophyte habitats exhibit remarkable heterogeneity,encompassing the spatial variation of abiotic and biotic components such as changes in water conditions and weather as well as anthropogenic stressors.Environmental factors are thought to be important drivers shaping the genetic and epigenetic variation of aquatic plants.However,the links among genetic diversity,epigenetic variation,and environmental variables remain largely unclear,especially for clonal aquatic plants.Here,we performed population genetic and epigenetic analyses in conjunction with habitat discrimination to elucidate the environmental factors driving intraspecies genetic and epigenetic variation in hornwort(Ceratophyllum demersum)in a subtropical lake.Environmental factors were highly correlated with the genetic and epigenetic variation of C.demersum,with temperature being a key driver of the genetic variation.Lower temperature was detected to be correlated with greater genetic and epigenetic variation.Genetic and epigenetic variation were positively driven by water temperature,but were negatively affected by ambient air temperature.These findings indicate that the genetic and epigenetic variation of this clonal aquatic herb is not related to the geographic feature but is instead driven by environmental conditions,and demonstrate the effects of temperature on local genetic and epigenetic variation in aquatic systems.展开更多
Zebrafish serve as a valuable model organism for studying germ cell biology and reproductive processes.The AB strain of zebrafish is proposed to exhibit a polygenic sex determination system,where most males initially ...Zebrafish serve as a valuable model organism for studying germ cell biology and reproductive processes.The AB strain of zebrafish is proposed to exhibit a polygenic sex determination system,where most males initially develop juvenile ovaries before committing to male fate.In species with chromosomal sex determination,gonadal somatic cells are recognized as key determinants of germ cell fate.Notably,the loss of germ cells in zebrafish leads to masculinization,implying that germ cells harbor an intrinsic feminization signal.However,the specific signal triggering oogenesis in zebrafish remains unclear.In the present study,we identified foxl2l as an oocyte progenitor-specific gene essential for initiating oogenesis in germ cells.Results showed that foxl2l-knockout zebrafish bypassed the juvenile ovary stage and exclusively developed into fertile males.Further analysis revealed that loss of foxl2l hindered the initiation of oocyte-specific meiosis and prevented entry into oogenesis,leading to premature spermatogenesis during early gonadal development.Furthermore,while mutation of the pro-male gene dmrt1 led to fertile female differentiation,simultaneous disruption of foxl2l in dmrt1 mutants completely blocked oogenesis,with a large proportion of germ cells arrested as germline stem cells,highlighting the crucial role of foxl2l in oogenesis.Overall,this study highlights the unique function of foxl2l as a germ cell-intrinsic gatekeeper of oogenesis in zebrafish.展开更多
Dormancy represents a fascinating adaptive strategy for organisms to survive in unforgiving environments.After a period of dormancy,organisms often exhibit exceptional resilience.This period is typically divided into ...Dormancy represents a fascinating adaptive strategy for organisms to survive in unforgiving environments.After a period of dormancy,organisms often exhibit exceptional resilience.This period is typically divided into hibernation and aestivation based on seasonal patterns.However,the mechanisms by which organisms adapt to their environments during dormancy,as well as the potential relationships between different states of dormancy,deserve further exploration.Here,we selected Perccottus glenii and Protopterus annectens as the primary subjects to study hibernation and aestivation,respectively.Based on histological and transcriptomic analysis of multiple organs,we discovered that dormancy involved a coordinated functional response across organs.Enrichment analyses revealed noteworthy disparities between the two dormant species in their responses to extreme temperatures.Notably,similarities in gene expression patterns pertaining to energy metabolism,neural activity,and biosynthesis were noted during hibernation,suggesting a potential correlation between hibernation and aestivation.To further explore the relationship between these two phenomena,we analyzed other dormancy-capable species using data from publicly available databases.This comparative analysis revealed that most orthologous genes involved in metabolism,cell proliferation,and neural function exhibited consistent expression patterns during dormancy,indicating that the observed similarity between hibernation and aestivation may be attributable to convergent evolution.In conclusion,this study enhances our comprehension of the dormancy phenomenon and offers new insights into the molecular mechanisms underpinning vertebrate dormancy.展开更多
Glass catfish(Kryptopterus vitreolus)are notable in the aquarium trade for their highly transparent body pattern.This transparency is due to the loss of most reflective iridophores and light-absorbing melanophores in ...Glass catfish(Kryptopterus vitreolus)are notable in the aquarium trade for their highly transparent body pattern.This transparency is due to the loss of most reflective iridophores and light-absorbing melanophores in the main body,although certain black and silver pigments remain in the face and head.To date,however,the molecular mechanisms underlying this transparent phenotype remain largely unknown.To explore the genetic basis of this transparency,we constructed a chromosome-level haplotypic genome assembly for the glass catfish,encompassing 32 chromosomes and 23344 protein-coding genes,using PacBio and Hi-C sequencing technologies and standard assembly and annotation pipelines.Analysis revealed a premature stop codon in the putative albinism-related tyrp1b gene,encoding tyrosinase-related protein 1,rendering it a nonfunctional pseudogene.Notably,a synteny comparison with over 30 other fish species identified the loss of the endothelin-3(edn3b)gene in the glass catfish genome.To investigate the role of edn3b,we generated edn3b^(−/−)mutant zebrafish,which exhibited a remarkable reduction in black pigments in body surface stripes compared to wild-type zebrafish.These findings indicate that edn3b loss contributes to the transparent phenotype of the glass catfish.Our high-quality chromosome-scale genome assembly and identification of key genes provide important molecular insights into the transparent phenotype of glass catfish.These findings not only enhance our understanding of the molecular mechanisms underlying transparency in glass catfish,but also offer a valuable genetic resource for further research on pigmentation in various animal species.展开更多
Stearyl coenzyme A desaturase(SCD), also known as delta-9 desaturase, catalyzes the rate-limiting step in the formation of monounsaturated fatty acids.In mammals, depletion or inhibition of SCD activity generally lead...Stearyl coenzyme A desaturase(SCD), also known as delta-9 desaturase, catalyzes the rate-limiting step in the formation of monounsaturated fatty acids.In mammals, depletion or inhibition of SCD activity generally leads to a decrease in triglycerides and cholesteryl esters. However, the endogenous role of scd in teleost fish remains unknown. Here, we generated a zebrafish scd mutant(scd-/-) to elucidate the role of scd in lipid metabolism and sexual development. Gas chromatography-mass spectrometry(GC-MS) showed that the scd-/- mutants had increased levels of saturated fatty acids C16:0 and C18:0, and decreased levels of monounsaturated fatty acids C16:1 and C18:1. The mutant fish displayed a short stature and an enlarged abdomen during development. Unlike Scd-/ -mammals, the scd-/- zebrafish showed significantly increased fat accumulation in the whole body,especially in the liver, leading to hepatic mitochondrial dysfunction and severe cell apoptosis.Mechanistically, srebf1, a gene encoding a transcriptional activator related to adipogenesis,acc1 and acaca, genes involved in fatty acid synthesis, and dgat2, a key gene involved in triglyceride synthesis, were significantly upregulated in mutant livers to activate fatty acid biosynthesis and adipogenesis. The scd-/- males exhibited defective natural mating behavior due to defective genital papillae but possessed functional mature sperm. All defects in the scd-/- mutants could be rescued by ubiquitous transgenic overexpression of scd. In conclusion, our study demonstrates that scd is indispensable for maintaining lipid homeostasis and development of secondary sexual characteristics in zebrafish.展开更多
Reproductive strategies and spawning habits play key roles in the evolution of endemic East Asian cyprinids.However,the molecular mechanisms underlying the regulation of spawning habits are not well understood.We rece...Reproductive strategies and spawning habits play key roles in the evolution of endemic East Asian cyprinids.However,the molecular mechanisms underlying the regulation of spawning habits are not well understood.We recently identified zona pellucida(Zp) as the top differentially expressed protein between East Asian cyprinids that produce adhesive and semi-buoyant eggs,suggesting that Zp protein may play important roles in the regulation of egg type.In this work,we generated transgenic zebrafish in which oocyte-specific expression of zp genes from rare minnow(Gobiocypris rarus),an East Asian cyprinid laying adhesive eggs,was driven by a zebrafish zp3.2 gene promoter.We found that the transgenic eggs obtained partial adhesiveness and exhibited alteration in hydration and buoyancy.Abnormal metabolism of vitellogenin(VTG) may contribute to enhanced hydration and/or buoyancy.Our work shows that expression of the exogenous zp3a gene from an adhesiveegg producing fish is sufficient to induce changes in both egg adhesiveness and buoyancy in zebrafish,emphasizing the important role of zp genes in the regulation of spawning habits.Our results thus provide new insights into how endemic East Asian cyprinids may have adapted to the Yangtze river-lake system via changes in spawning habits.展开更多
Makinoella Okada is a genus of coccoid green algae belonging to the family Oocystaceae with typical morphological characteristics.Reports to date included only one type species.Since the genus is rarely reported,there...Makinoella Okada is a genus of coccoid green algae belonging to the family Oocystaceae with typical morphological characteristics.Reports to date included only one type species.Since the genus is rarely reported,there is a lack of taxonomic research.In this study,17 strains of this genus were collected from several different places in China,and their taxonomic studies were conducted based on morphological and molecular phylogenetic analysis.The phylogenetic results based on the analysis of ITS,chloroplast genes rbc L and tuf A showed that the genus was divided into two branches.One of the branches comprised newly collected algae.Compensatory base changes(CBCs)and hemi-compensatory base changes(hemi-CBCs)within the secondary structure of the ITS-2 confirmed the branches as two species.Compared with the type species of Makinoella tosaensis,the cell size of this new branch was only about 50%,and included 2-4 colonial cells.Therefore,based on the smaller cell size,simpler colony composition,independent phylogenetic position and CBCs and hemi-CBCs,we suggest that the new clade should be designated as a new taxon of Makinoella,namely Makinoella parva.Among the four molecular markers using in this study,the rbc L and newly introduced ITS are recommended for species separation,which can help further studies to revise the species and generic concepts of the family.展开更多
Under increasing anthropogenic pressure,species with a previously contiguous distribution across their ranges have been reduced to small fragmented populations.The critically endangered Yangtze finless porpoise(Neopho...Under increasing anthropogenic pressure,species with a previously contiguous distribution across their ranges have been reduced to small fragmented populations.The critically endangered Yangtze finless porpoise(Neophocaena asiaeorientalis asiaeorientalis),once commonly observed in the Yangtze River-Poyang Lake junction,is now rarely seen in the river-lake corridor.In this study,static passive acoustic monitoring techniques were used to detect the biosonar activities of the Yangtze finless porpoise in this unique corridor.Generalized linear models were used to examine the correlation between these activities and anthropogenic impacts from the COVID-19 pandemic lockdown and boat navigation,as well as environmental variables,including hydrological conditions and light levels.Over approximately three consecutive years of monitoring(2020–2022),porpoise biosonar was detected during 93%of logged days,indicating the key role of the corridor for finless porpoise conservation.In addition,porpoise clicks were recorded in 3.80%of minutes,while feeding correlated buzzes were detected in 1.23%of minutes,suggesting the potential existence of localized,small-scale migration.Furthermore,both anthropogenic and environmental variables were significantly correlated with the diel,lunar,monthly,seasonal,and annual variations in porpoise biosonar activities.During the pandemic lockdown period,porpoise sonar detection showed a significant increase.Furthermore,a significant negative correlation was identified between the detection of porpoise click trains and buzzes and boat traffic intensity.In addition to water level and flux,daylight and moonlight exhibited significant correlations with porpoise biosonar activities,with markedly higher detections at night and quarter moon periods.Ensuring the spatiotemporal reduction of anthropogenic activities,implementing vessel speed restrictions(e.g.,during porpoise migration and feeding),and maintaining local natural hydrological regimes are critical factors for sustaining porpoise population viability.展开更多
Single-species management ignores the interactions between species,and ecosystem-based fisheries management(EBFM)has become a main method to fisheries management.Understanding food web structures and species interacti...Single-species management ignores the interactions between species,and ecosystem-based fisheries management(EBFM)has become a main method to fisheries management.Understanding food web structures and species interactions is essential for the implementation of EBFM and maintenance of ecosystem functions.Overfishing is one of the main reasons behind the depletion,which could even lead to the depletion of some target species in local areas.So understanding the impacts of species depletion on food web structures is important for the implementation of EBFM.The impacts of species depletion can be transmitted through the food web and cause the local extinction of both target and non-target species.In this study,topological network analysis was applied to examine the impacts of species depletion on the food web structure of Haizhou Bay.Results showed that fine crayfish Leptochela gracilis,squid Loligo sp.,and Japanese snapping shrimp Alpheus japonicus have the highest numbers of outgoing links(48,32 and 31 respectively);thus,these species may be considered key prey species.Whitespotted conger Conger myriaster,fat greenling Hexagrammos otakii,and bluefin gurnard Chelidonichthys kumu were key predators with the highest number of incoming links(37,36 and 35 respectively).The competition graphs derived from the Haizhou Bay food web were highly connected(more than 40%predators sharing over 10 common prey species),and showed close trophic interaction between high trophic level fishes.Simulation analysis showed that the food web structure has small changes to the depletion of species in a highly complex food web.The most-connected target species did not necessarily indicate high structural importance;however,some species with low connectivity may demonstrate stronger trophic interactions and play important ecological roles in the food web.But most species were more sensitive to the depletion of the most-connected target species than other target species(for instance,for zooplankton,closeness centrality 13.876 in D6,but closeness centrality 82.143 in original food web).Therefore,EBFM should focus on the most-connected target species,but also on those species with few but strong links and feeding relationships in the food web.展开更多
The response of phytoplankton and its satellite bacteria to various concentrations(0.01%-10%v/v)of ethanol is studied.To elucidate the effect of ethanol,single-strains of phytoplankton(SSP)culture,pure strains of sate...The response of phytoplankton and its satellite bacteria to various concentrations(0.01%-10%v/v)of ethanol is studied.To elucidate the effect of ethanol,single-strains of phytoplankton(SSP)culture,pure strains of satellite bacteria isolated from nonaxenic SSP cultures,and Escherichia coli were screened.Results indicate that ethanol could promote the growth and photo synthetic efficiency(F_(v)/F_(m))of S SP at 0.01%and the growth of satellite bacteria at 0.01%-1%.Nevertheless,ethanol inhibited the growth and F_(v)/F_(m)of SSP at 0.1%-1%,and killed bacteria and SSP at 10% concentration.Further investigation on a satellite bacterium(Mameliella alba)revealed that ethanol promotes growth by serving as a growth stimulant rather than a metabolic carbon source.The 16 S rRNA gene amplicon indicated that all nonaxenic S SP cultures harbor distinct satellite bacteria communities where the SSP culture of Skeletonema costatum,Phaeodactylum tricornutum,and Dunaliella bardawil were dominated by bacteria genera of Marivita(~80%),Dinoroseobacter(~47%),and Halomonas(~87%),respectively,indicating that every SSP cultures have their own distinct satellite bacterial community.The bacteria family Rhodobacteraceae was dominant in the two marine diatoms,whereas Halomonadaceae was dominant in the saline green microalga.Compared to their respective controls,the supply of 0.5% ethanol to SSP cultures promoted the growth of the satellite bacteria but did not cause a significant difference in species composition of satellite bacteria.Therefore,a low concentration of ethanol can promote the growth of bacteria in a non-selective way.This study enriched our knowledge about the effect of ethanol on aquatic microbes and provided a baseline for basic and applied biotechnological re search in the aquatic environment in the future.展开更多
After the publication of Bo et al.(2022),we realized that the assembly of the opah genome was somewhat inappropriate.We have corrected the issue and apologize for any confusion this may have caused.We have resampled,r...After the publication of Bo et al.(2022),we realized that the assembly of the opah genome was somewhat inappropriate.We have corrected the issue and apologize for any confusion this may have caused.We have resampled,resequenced,and reanalyzed the genome to optimize its assembly level.Results showed that many candidate genes were involved in skeletal muscle development and skeletal muscle heat production and both thermal insulation strategies were valid,however the candidate genes needed to be corrected.For details,please refer to the modified Supplementary Materials.展开更多
We prove the existence of an analogy between spatial long-range interactions,which are of the convolution-type introduced in non-relativistic quantum mechanics,and the generalized uncertainty principle predicted from ...We prove the existence of an analogy between spatial long-range interactions,which are of the convolution-type introduced in non-relativistic quantum mechanics,and the generalized uncertainty principle predicted from quantum gravity theories.As an illustration,black hole temperature effects are discussed.It is observed that for specific choices of the moment's kernels,cold black holes may emerge in the theory.展开更多
We conducted experiments in an artificial stream tank with wild juvenile Chinese sturgeon Acipenser sinensis captured in the Yangtze Estuary to test the null hypothesis that their feeding efficiency on Barcheek goby R...We conducted experiments in an artificial stream tank with wild juvenile Chinese sturgeon Acipenser sinensis captured in the Yangtze Estuary to test the null hypothesis that their feeding efficiency on Barcheek goby Rhinogobius giurinus was not affected by sand vs. smooth glass substrate. Gobies are among the most common prey eaten by wild juvenile A. sinensis in the estuary. Test results found neither substrate type significantly affected feeding efficiency by juveniles. Previous research found a strong innate habitat preference of A. sinensis for sand substrate. The present results indicate that the preference for sand is not related to efficiently capturing R. giurinus on sand, but is an adaptation predisposing juvenile A. sinensis to seek sandy substrate where R. giurinus and other benthic forage are the most abundant in the Yangtze Estuary.展开更多
Based on a combination of morphology and molecular data of ribosomal DNA genes,a new diatom genus Lineaperpetua gen.nov.Yu,You,Kociolek&Wang is described.The features that help define Lineaperpetua at the level of...Based on a combination of morphology and molecular data of ribosomal DNA genes,a new diatom genus Lineaperpetua gen.nov.Yu,You,Kociolek&Wang is described.The features that help define Lineaperpetua at the level of genus include:a tangentially undulated valve face;continuous cribra areolae on the valve interior consisting of pores arranged as strips;single rimoportula located inside the ring of marginal fultoportulae.Additionally,phylogenetic analysis based on nuclear small subunit(SSU)rDNA sequences and nuclear large subunit(LSU)rDNA gene placed the three strains of L.lacustris in a single,monophyletic clade at a considerable sequence distance from the other genera(Thalassiosira,Conticribra,Planktoniella,Shinodiscus,and other genera)belonging to Thalassiosirales.Despite the similarities with some species of Thalassiosira,Conticribra,and Spicaticribra,the suite of features found in Lineaperpetua differentiate it from these other genera.These molecular data and morphological characters suggest an affinity of the new genus to the Thalassiosiraceae.展开更多
A new filamentous cyanobacterial strain(CHAB 4127)was successfully isolated from the algal mat during the field investigation of the open channel from Luanhe River to Tianjin,China.The polyphasic approach combining mo...A new filamentous cyanobacterial strain(CHAB 4127)was successfully isolated from the algal mat during the field investigation of the open channel from Luanhe River to Tianjin,China.The polyphasic approach combining morphological,ultrastructural,ecological,and molecular features was used to characterize this studied strain.The strain is morphologically similar to the Microcoleus-like cyanobacterial taxa under light microscopy,and the radial arrangement of thylakoids is also consistent with that of Microcoleus-like groups.The phylogenetic position of CHAB 4127 based on 16S rRNA gene sequences,is shown to be clearly clustered into an independent clade with the newly established genus Microcoleusiopsis.The maximum similarity of 16S r RNA gene of the studied strain with other existing related cyanobacterial taxa is 93.97%,and the ITS secondary structures is also obviously different from other members of Microcoleaceae.Based on all the above evidence,we proposed the establishment of this novel cyanobacterial genus as Neomicrocoleus,with its type species,Neomicrocoleus tianjinensis.展开更多
Earth’s near space,located in the region between 20 and 100 km above sea level,is characterized by extreme conditions,such as low temperature,low atmospheric pressure,harsh radiation,and extreme dryness.These conditi...Earth’s near space,located in the region between 20 and 100 km above sea level,is characterized by extreme conditions,such as low temperature,low atmospheric pressure,harsh radiation,and extreme dryness.These conditions are analogous to those found on the surface of Mars and in the atmosphere of Venus,making Earth’s near space a unique natural laboratory for astrobiological research.To address essential astrobiological questions,teams from the Chinese Academy of Sciences(CAS)have developed a scientific balloon platform,the CAS Balloon-Borne Astrobiology Platform(CAS-BAP),to study the effects of near space environmental conditions on the biology and survival strategies of representative organisms in this terrestrial analog.Here,we describe the versatile Biological Samples Exposure Payload(BIOSEP)loaded on the CAS-BAP with respect to its structure and function.The primary function of BIOSEP is to expose appropriate biological specimens to the harsh conditions of near space and subsequently return the exposed samples to laboratories for further analysis.Four successful flight missions in near space from 2019 to 2021 have demonstrated the high reliability and efficiency of the payload in communicating between hardware and software units,recording environmental data,exposing sample containers,protecting samples from external contamination,and recovering samples.Understanding the effects of Earth’s near space conditions on biological specimens will provide valuable insights into the survival strategies of organisms in extreme environments and the search for life beyond Earth.The development of BIOSEP and associated biological exposure experiments will enhance our understanding of the potential for life on Mars and the habitability of the atmospheric regions of other planets in the solar system and beyond.展开更多
基金supported by the Strategic Priority Research Program of the Chinese Academy of Sciences(Precision Seed Design and Breeding,XDA24010108)National Natural Science Foundation of China(31972780&31721005)+1 种基金National Key R&D Program of China(2018YFA0801000)State Key Laboratory of Freshwater Ecology and Biotechnology(2019FBZ05)。
文摘Omega-3 polyunsaturated fatty acids(n-3 PUFAs),particularly docosahexaenoic acid(22:6n-3,DHA),play crucial roles in the reproductive health of vertebrates,including humans.Nevertheless,the underlying mechanism related to this phenomenon remains largely unknown.In this study,we employed two zebrafish genetic models,i.e.,elovl2^(-/-)mutant as an endogenous DHAdeficient model and fat1(omega-3 desaturase encoding gene)transgenic zebrafish as an endogenous DHA-rich model,to investigate the effects of DHA on oocyte maturation and quality.Results show that the elovl2^(-/-)mutants had much lower fecundity and poorer oocyte quality than the wild-type controls,while the fat1 zebrafish had higher fecundity and better oocyte quality than wildtype controls.DHA deficiency in elovl2^(-/-)embryos led to defects in egg activation,poor microtubule stability,and reduced pregnenolone levels.Further study revealed that DHA promoted pregnenolone synthesis by enhancing transcription of cyp11a1,which encodes the cholesterol side-chain cleavage enzyme,thereby stabilizing microtubule assembly during oogenesis.In turn,the hypothalamic-pituitary-gonadal axis was enhanced by DHA.In conclusion,using two unique genetic models,our findings demonstrate that endogenously synthesized DHA promotes oocyte maturation and quality by promoting pregnenolone production via transcriptional regulation of cyp11a1.
基金Supported by the National Natural Science Foundation of China(Nos.32000167,32370219)the Scientific and Technological Innovation Programs of Higher Education Institutions in Shanxi(No.2020L0524)+1 种基金the Fundamental Research Program of Shanxi Province(No.20210302124302)the Shanxi Key Laboratory of Earth Surface Processes and Resource Ecological Security in Fenhe River Basin,Taiyuan Normal University。
文摘Members of the family Scenedesmaceae are some of the most common algal taxa in inland ecosystems,and they are widely distributed in freshwaters,aerial,and sub-aerial habitats.With the continuous updating of methods,the classic morphological taxonomy of this family needs to be revised.In recent years,many genera of Scenedesmaceae have been established via the use of molecular methods.The phylogenetic relationships within Scenedesmaceae were analyzed using different molecular markers and morphological data,and the new freshwater genus Coccoidesmus Wang,Hou et Liu gen.nov.was described.Two new species in this genus were also described.Phylogenetic analysis based on tufA genes revealed that the new genus formed an independent clade closely related to Comasiella.However,these two genera are characterized by significant morphological differences in colony arrangement and cell shape.The chloroplast genome of the type species was assembled and annotated,and analyses of genome structure and sequences were conducted.More genome data could help clarify the phylogenetic relationships within this family.
基金Supported by the Project of Basic Investigation on Ecological Environment Quality of Erhai Lake(No.TPDL-2021-C 265)the Ecological Effects,Population Regulation and Management Strategies of Invasion of Japanese Smelt(Hypomesus nipponensis)in Erhai Lake funded by the government of Dali City,Yunnan Province,China(No.[2018]447)。
文摘Environmental DNA(eDNA)has been used as an important tool for fish diversity analysis,which can greatly solve the problems in traditional survey methodology.However,little work has been done on the actual monitoring accuracy of eDNA.In this study,we analyzed the current status of fish resources in Erhai Lake in Yunnan,SW China,by dividing the lake into three sectors according to habitat differences,and compared the results of eDNA and traditional capture methods to investigate the shortcomings of the current analysis of eDNA results.A total of 27 fish species were detected by eDNA and traditional capture methods,including 20 and 19 fish species,respectively,and additional differences in fish composition between the two methods.The alpha diversity showed higher fish abundance and lower fish diversity by eDNA method compared to the traditional capture method,demonstrating that eDNA was not superior for use in fish diversity analysis.Fish community similarity analysis showed that community differences were generally significant for eDNA(P<0.05).RDA analysis indicated that environmental factors did not significantly affect fish communities monitored by the eDNA method.However,water temperature,aquatic plants,and water depth had significant(P<0.05)effects on fish communities in the traditional capture method,suggesting that eDNA results are insensitive to the effects of environmental factors.Our results illustrate the effectiveness of eDNA in fish identification and the issues in quantification compared to traditional capture methods.Therefore,combining eDNA with traditional methods is a more effective method for analyzing eDNA metabarcoding,following which the protocols of both quantitative methods can be designed to explore the regularity of eDNA quantification.
基金the National Natural Science Foundation of China(Nos.31970213,31870187)the Natural Science Foundation of Heilongjiang Province for Excellent Young Scholars(No.YQ2020C032)the Second Tibetan Plateau Scientific Expedition and Research Program(No.2019QZKK0304)。
文摘During our investigation of diatom biodiversity in Xizang,two species exhibited unique morphological features discriminative from all previously known genera.Herein we describe these two species and describe as new the genus,Spargeria gen.nov.The new genus features narrow to wide rectangular valves,narrow valve mantles,filiform raphe branches that occur on the valve face only,terminal raphe fissures straight or slightly deflected to same side,bow-tie shaped central areas,chambered striae present on the valve face only,being absent from the mantle,wider striae near the axial area and very narrow near the margin,multiseriate striae with small and round areolae that are occluded externally.Comparatively,Spargeria zhuii sp.nov.has larger and robust valves,radiate striae,with one divergent stria near the apices,while Spargeria chenia sp.nov.is smaller,with narrow valves,striae slightly radiate in the middle,becoming convergent or parallel near apices.This new genus belongs to the family Pinnulariaceae,and it was compared and contrasted with other genera of this family.Our work suggests the need for continued studies to document the biodiversity of diatoms in Xizang.
基金supported by Liangzi Lake reservesupported by the International Partnership Program of Chinese Academy of Sciences [Grant number, 152342KYSB20200021]+1 种基金the National Key R and D Program of China [Grant numbers, 2020YFD0900305, 2018YFD0900801]National Natural Science Foundation of China [Grant numbers, 32001107, 32201285, 32101254]
文摘Macrophyte habitats exhibit remarkable heterogeneity,encompassing the spatial variation of abiotic and biotic components such as changes in water conditions and weather as well as anthropogenic stressors.Environmental factors are thought to be important drivers shaping the genetic and epigenetic variation of aquatic plants.However,the links among genetic diversity,epigenetic variation,and environmental variables remain largely unclear,especially for clonal aquatic plants.Here,we performed population genetic and epigenetic analyses in conjunction with habitat discrimination to elucidate the environmental factors driving intraspecies genetic and epigenetic variation in hornwort(Ceratophyllum demersum)in a subtropical lake.Environmental factors were highly correlated with the genetic and epigenetic variation of C.demersum,with temperature being a key driver of the genetic variation.Lower temperature was detected to be correlated with greater genetic and epigenetic variation.Genetic and epigenetic variation were positively driven by water temperature,but were negatively affected by ambient air temperature.These findings indicate that the genetic and epigenetic variation of this clonal aquatic herb is not related to the geographic feature but is instead driven by environmental conditions,and demonstrate the effects of temperature on local genetic and epigenetic variation in aquatic systems.
基金supported by the National Natural Science Foundation of China(32025037)Ministry of Science and Technology of China(2023YFD2401603)+2 种基金Ministry of Agriculture and Rural Affairs of China(NK2022010207)Science and Technology Special Fund of Hainan Province(ZDYF2024XDNY256)Natural Science Foundation of Wuhan。
文摘Zebrafish serve as a valuable model organism for studying germ cell biology and reproductive processes.The AB strain of zebrafish is proposed to exhibit a polygenic sex determination system,where most males initially develop juvenile ovaries before committing to male fate.In species with chromosomal sex determination,gonadal somatic cells are recognized as key determinants of germ cell fate.Notably,the loss of germ cells in zebrafish leads to masculinization,implying that germ cells harbor an intrinsic feminization signal.However,the specific signal triggering oogenesis in zebrafish remains unclear.In the present study,we identified foxl2l as an oocyte progenitor-specific gene essential for initiating oogenesis in germ cells.Results showed that foxl2l-knockout zebrafish bypassed the juvenile ovary stage and exclusively developed into fertile males.Further analysis revealed that loss of foxl2l hindered the initiation of oocyte-specific meiosis and prevented entry into oogenesis,leading to premature spermatogenesis during early gonadal development.Furthermore,while mutation of the pro-male gene dmrt1 led to fertile female differentiation,simultaneous disruption of foxl2l in dmrt1 mutants completely blocked oogenesis,with a large proportion of germ cells arrested as germline stem cells,highlighting the crucial role of foxl2l in oogenesis.Overall,this study highlights the unique function of foxl2l as a germ cell-intrinsic gatekeeper of oogenesis in zebrafish.
基金supported by the National Natural Science Foundation of China (32170480,31972866)Youth Innovation Promotion Association,Chinese Academy of Sciences (http://www.yicas.cn)+1 种基金Young Top-notch Talent Cultivation Program of Hubei ProvinceWuhan Branch,Supercomputing Center,Chinese Academy of Sciences,China。
文摘Dormancy represents a fascinating adaptive strategy for organisms to survive in unforgiving environments.After a period of dormancy,organisms often exhibit exceptional resilience.This period is typically divided into hibernation and aestivation based on seasonal patterns.However,the mechanisms by which organisms adapt to their environments during dormancy,as well as the potential relationships between different states of dormancy,deserve further exploration.Here,we selected Perccottus glenii and Protopterus annectens as the primary subjects to study hibernation and aestivation,respectively.Based on histological and transcriptomic analysis of multiple organs,we discovered that dormancy involved a coordinated functional response across organs.Enrichment analyses revealed noteworthy disparities between the two dormant species in their responses to extreme temperatures.Notably,similarities in gene expression patterns pertaining to energy metabolism,neural activity,and biosynthesis were noted during hibernation,suggesting a potential correlation between hibernation and aestivation.To further explore the relationship between these two phenomena,we analyzed other dormancy-capable species using data from publicly available databases.This comparative analysis revealed that most orthologous genes involved in metabolism,cell proliferation,and neural function exhibited consistent expression patterns during dormancy,indicating that the observed similarity between hibernation and aestivation may be attributable to convergent evolution.In conclusion,this study enhances our comprehension of the dormancy phenomenon and offers new insights into the molecular mechanisms underpinning vertebrate dormancy.
基金supported by the National Key Research and Development Program of China(2022YFE0139700,2023YFE0205100)Key Laboratory of Tropical and Subtropical Fishery Resources Application and Cultivation,Ministry of Agriculture and Rural Affairs,Pearl River Fisheries Research Institute,Chinese Academy of Fishery Sciences(20220202)+3 种基金Guangdong Provincial Special Fund for Modern Agriculture Industry Technology Innovation Team(2023KJ150)China-ASEAN Maritime Cooperation Fund(CAMC-2018F)National Freshwater Genetic Resource Center(FGRC18537)Guangdong Rural Revitalization Strategy Special Provincial Organization and Implementation Project Funds(2022-SBH-00-001)。
文摘Glass catfish(Kryptopterus vitreolus)are notable in the aquarium trade for their highly transparent body pattern.This transparency is due to the loss of most reflective iridophores and light-absorbing melanophores in the main body,although certain black and silver pigments remain in the face and head.To date,however,the molecular mechanisms underlying this transparent phenotype remain largely unknown.To explore the genetic basis of this transparency,we constructed a chromosome-level haplotypic genome assembly for the glass catfish,encompassing 32 chromosomes and 23344 protein-coding genes,using PacBio and Hi-C sequencing technologies and standard assembly and annotation pipelines.Analysis revealed a premature stop codon in the putative albinism-related tyrp1b gene,encoding tyrosinase-related protein 1,rendering it a nonfunctional pseudogene.Notably,a synteny comparison with over 30 other fish species identified the loss of the endothelin-3(edn3b)gene in the glass catfish genome.To investigate the role of edn3b,we generated edn3b^(−/−)mutant zebrafish,which exhibited a remarkable reduction in black pigments in body surface stripes compared to wild-type zebrafish.These findings indicate that edn3b loss contributes to the transparent phenotype of the glass catfish.Our high-quality chromosome-scale genome assembly and identification of key genes provide important molecular insights into the transparent phenotype of glass catfish.These findings not only enhance our understanding of the molecular mechanisms underlying transparency in glass catfish,but also offer a valuable genetic resource for further research on pigmentation in various animal species.
基金supported by the Strategic Priority Research Program of the Chinese Academy of Sciences(XDA24010108)National Natural Science Foundation of China(31872554,32172952)Project from the State Key Laboratory of Freshwater Ecology and Biotechnology(2019FBZ05)。
文摘Stearyl coenzyme A desaturase(SCD), also known as delta-9 desaturase, catalyzes the rate-limiting step in the formation of monounsaturated fatty acids.In mammals, depletion or inhibition of SCD activity generally leads to a decrease in triglycerides and cholesteryl esters. However, the endogenous role of scd in teleost fish remains unknown. Here, we generated a zebrafish scd mutant(scd-/-) to elucidate the role of scd in lipid metabolism and sexual development. Gas chromatography-mass spectrometry(GC-MS) showed that the scd-/- mutants had increased levels of saturated fatty acids C16:0 and C18:0, and decreased levels of monounsaturated fatty acids C16:1 and C18:1. The mutant fish displayed a short stature and an enlarged abdomen during development. Unlike Scd-/ -mammals, the scd-/- zebrafish showed significantly increased fat accumulation in the whole body,especially in the liver, leading to hepatic mitochondrial dysfunction and severe cell apoptosis.Mechanistically, srebf1, a gene encoding a transcriptional activator related to adipogenesis,acc1 and acaca, genes involved in fatty acid synthesis, and dgat2, a key gene involved in triglyceride synthesis, were significantly upregulated in mutant livers to activate fatty acid biosynthesis and adipogenesis. The scd-/- males exhibited defective natural mating behavior due to defective genital papillae but possessed functional mature sperm. All defects in the scd-/- mutants could be rescued by ubiquitous transgenic overexpression of scd. In conclusion, our study demonstrates that scd is indispensable for maintaining lipid homeostasis and development of secondary sexual characteristics in zebrafish.
基金supported by the Strategic Priority Research Program of the Chinese Academy of Sciences (XDB31000000)。
文摘Reproductive strategies and spawning habits play key roles in the evolution of endemic East Asian cyprinids.However,the molecular mechanisms underlying the regulation of spawning habits are not well understood.We recently identified zona pellucida(Zp) as the top differentially expressed protein between East Asian cyprinids that produce adhesive and semi-buoyant eggs,suggesting that Zp protein may play important roles in the regulation of egg type.In this work,we generated transgenic zebrafish in which oocyte-specific expression of zp genes from rare minnow(Gobiocypris rarus),an East Asian cyprinid laying adhesive eggs,was driven by a zebrafish zp3.2 gene promoter.We found that the transgenic eggs obtained partial adhesiveness and exhibited alteration in hydration and buoyancy.Abnormal metabolism of vitellogenin(VTG) may contribute to enhanced hydration and/or buoyancy.Our work shows that expression of the exogenous zp3a gene from an adhesiveegg producing fish is sufficient to induce changes in both egg adhesiveness and buoyancy in zebrafish,emphasizing the important role of zp genes in the regulation of spawning habits.Our results thus provide new insights into how endemic East Asian cyprinids may have adapted to the Yangtze river-lake system via changes in spawning habits.
基金Supported by the National Natural Science Foundation of China(Nos.32370219,31900187,32000167)the Shanxi Province Science Foundation for Youths(Nos.201901D211132,201901D211421)+4 种基金the Scientific and Technological Innovation Programs of Higher Education Institutions in Shanxi(Nos.2019L0073,2020L0524)the Key Laboratory of Algal BiologyInstitute of HydrobiologyChinese Academy of Sciences(No.2018-002)the Shanxi“1331 Project”。
文摘Makinoella Okada is a genus of coccoid green algae belonging to the family Oocystaceae with typical morphological characteristics.Reports to date included only one type species.Since the genus is rarely reported,there is a lack of taxonomic research.In this study,17 strains of this genus were collected from several different places in China,and their taxonomic studies were conducted based on morphological and molecular phylogenetic analysis.The phylogenetic results based on the analysis of ITS,chloroplast genes rbc L and tuf A showed that the genus was divided into two branches.One of the branches comprised newly collected algae.Compensatory base changes(CBCs)and hemi-compensatory base changes(hemi-CBCs)within the secondary structure of the ITS-2 confirmed the branches as two species.Compared with the type species of Makinoella tosaensis,the cell size of this new branch was only about 50%,and included 2-4 colonial cells.Therefore,based on the smaller cell size,simpler colony composition,independent phylogenetic position and CBCs and hemi-CBCs,we suggest that the new clade should be designated as a new taxon of Makinoella,namely Makinoella parva.Among the four molecular markers using in this study,the rbc L and newly introduced ITS are recommended for species separation,which can help further studies to revise the species and generic concepts of the family.
基金supported by Science and Technology Service Network Initiative Program of the Chinese Academy of Sciencesthe National Natural Science Foundation of China (41806197)the Exploratory Program of the Natural Science Foundation of Zhejiang Province (ZX2023000154)。
文摘Under increasing anthropogenic pressure,species with a previously contiguous distribution across their ranges have been reduced to small fragmented populations.The critically endangered Yangtze finless porpoise(Neophocaena asiaeorientalis asiaeorientalis),once commonly observed in the Yangtze River-Poyang Lake junction,is now rarely seen in the river-lake corridor.In this study,static passive acoustic monitoring techniques were used to detect the biosonar activities of the Yangtze finless porpoise in this unique corridor.Generalized linear models were used to examine the correlation between these activities and anthropogenic impacts from the COVID-19 pandemic lockdown and boat navigation,as well as environmental variables,including hydrological conditions and light levels.Over approximately three consecutive years of monitoring(2020–2022),porpoise biosonar was detected during 93%of logged days,indicating the key role of the corridor for finless porpoise conservation.In addition,porpoise clicks were recorded in 3.80%of minutes,while feeding correlated buzzes were detected in 1.23%of minutes,suggesting the potential existence of localized,small-scale migration.Furthermore,both anthropogenic and environmental variables were significantly correlated with the diel,lunar,monthly,seasonal,and annual variations in porpoise biosonar activities.During the pandemic lockdown period,porpoise sonar detection showed a significant increase.Furthermore,a significant negative correlation was identified between the detection of porpoise click trains and buzzes and boat traffic intensity.In addition to water level and flux,daylight and moonlight exhibited significant correlations with porpoise biosonar activities,with markedly higher detections at night and quarter moon periods.Ensuring the spatiotemporal reduction of anthropogenic activities,implementing vessel speed restrictions(e.g.,during porpoise migration and feeding),and maintaining local natural hydrological regimes are critical factors for sustaining porpoise population viability.
基金The National Key R&D Program of China under contract No.2018YFD0900904the National Natural Science Foundation of China under contract Nos 31772852 and 31802301。
文摘Single-species management ignores the interactions between species,and ecosystem-based fisheries management(EBFM)has become a main method to fisheries management.Understanding food web structures and species interactions is essential for the implementation of EBFM and maintenance of ecosystem functions.Overfishing is one of the main reasons behind the depletion,which could even lead to the depletion of some target species in local areas.So understanding the impacts of species depletion on food web structures is important for the implementation of EBFM.The impacts of species depletion can be transmitted through the food web and cause the local extinction of both target and non-target species.In this study,topological network analysis was applied to examine the impacts of species depletion on the food web structure of Haizhou Bay.Results showed that fine crayfish Leptochela gracilis,squid Loligo sp.,and Japanese snapping shrimp Alpheus japonicus have the highest numbers of outgoing links(48,32 and 31 respectively);thus,these species may be considered key prey species.Whitespotted conger Conger myriaster,fat greenling Hexagrammos otakii,and bluefin gurnard Chelidonichthys kumu were key predators with the highest number of incoming links(37,36 and 35 respectively).The competition graphs derived from the Haizhou Bay food web were highly connected(more than 40%predators sharing over 10 common prey species),and showed close trophic interaction between high trophic level fishes.Simulation analysis showed that the food web structure has small changes to the depletion of species in a highly complex food web.The most-connected target species did not necessarily indicate high structural importance;however,some species with low connectivity may demonstrate stronger trophic interactions and play important ecological roles in the food web.But most species were more sensitive to the depletion of the most-connected target species than other target species(for instance,for zooplankton,closeness centrality 13.876 in D6,but closeness centrality 82.143 in original food web).Therefore,EBFM should focus on the most-connected target species,but also on those species with few but strong links and feeding relationships in the food web.
基金Supported by the National Natural Science Foundation of China(Nos.42076114,41876146)the China Postdoctoral Science Foundation Grant(No.2018M632580)the Special Investigation Project of Scientific and Technological Fundamental Resources(No.2018FY100202)。
文摘The response of phytoplankton and its satellite bacteria to various concentrations(0.01%-10%v/v)of ethanol is studied.To elucidate the effect of ethanol,single-strains of phytoplankton(SSP)culture,pure strains of satellite bacteria isolated from nonaxenic SSP cultures,and Escherichia coli were screened.Results indicate that ethanol could promote the growth and photo synthetic efficiency(F_(v)/F_(m))of S SP at 0.01%and the growth of satellite bacteria at 0.01%-1%.Nevertheless,ethanol inhibited the growth and F_(v)/F_(m)of SSP at 0.1%-1%,and killed bacteria and SSP at 10% concentration.Further investigation on a satellite bacterium(Mameliella alba)revealed that ethanol promotes growth by serving as a growth stimulant rather than a metabolic carbon source.The 16 S rRNA gene amplicon indicated that all nonaxenic S SP cultures harbor distinct satellite bacteria communities where the SSP culture of Skeletonema costatum,Phaeodactylum tricornutum,and Dunaliella bardawil were dominated by bacteria genera of Marivita(~80%),Dinoroseobacter(~47%),and Halomonas(~87%),respectively,indicating that every SSP cultures have their own distinct satellite bacterial community.The bacteria family Rhodobacteraceae was dominant in the two marine diatoms,whereas Halomonadaceae was dominant in the saline green microalga.Compared to their respective controls,the supply of 0.5% ethanol to SSP cultures promoted the growth of the satellite bacteria but did not cause a significant difference in species composition of satellite bacteria.Therefore,a low concentration of ethanol can promote the growth of bacteria in a non-selective way.This study enriched our knowledge about the effect of ethanol on aquatic microbes and provided a baseline for basic and applied biotechnological re search in the aquatic environment in the future.
文摘After the publication of Bo et al.(2022),we realized that the assembly of the opah genome was somewhat inappropriate.We have corrected the issue and apologize for any confusion this may have caused.We have resampled,resequenced,and reanalyzed the genome to optimize its assembly level.Results showed that many candidate genes were involved in skeletal muscle development and skeletal muscle heat production and both thermal insulation strategies were valid,however the candidate genes needed to be corrected.For details,please refer to the modified Supplementary Materials.
文摘We prove the existence of an analogy between spatial long-range interactions,which are of the convolution-type introduced in non-relativistic quantum mechanics,and the generalized uncertainty principle predicted from quantum gravity theories.As an illustration,black hole temperature effects are discussed.It is observed that for specific choices of the moment's kernels,cold black holes may emerge in the theory.
文摘We conducted experiments in an artificial stream tank with wild juvenile Chinese sturgeon Acipenser sinensis captured in the Yangtze Estuary to test the null hypothesis that their feeding efficiency on Barcheek goby Rhinogobius giurinus was not affected by sand vs. smooth glass substrate. Gobies are among the most common prey eaten by wild juvenile A. sinensis in the estuary. Test results found neither substrate type significantly affected feeding efficiency by juveniles. Previous research found a strong innate habitat preference of A. sinensis for sand substrate. The present results indicate that the preference for sand is not related to efficiently capturing R. giurinus on sand, but is an adaptation predisposing juvenile A. sinensis to seek sandy substrate where R. giurinus and other benthic forage are the most abundant in the Yangtze Estuary.
基金the Postdoctoral Science Foundation of China(No.2021 M 703434)the National Natural Science Foundation of China(Nos.32100165,32170205)the Natural Science Foundation of Shanghai(No.21 ZR 144730)。
文摘Based on a combination of morphology and molecular data of ribosomal DNA genes,a new diatom genus Lineaperpetua gen.nov.Yu,You,Kociolek&Wang is described.The features that help define Lineaperpetua at the level of genus include:a tangentially undulated valve face;continuous cribra areolae on the valve interior consisting of pores arranged as strips;single rimoportula located inside the ring of marginal fultoportulae.Additionally,phylogenetic analysis based on nuclear small subunit(SSU)rDNA sequences and nuclear large subunit(LSU)rDNA gene placed the three strains of L.lacustris in a single,monophyletic clade at a considerable sequence distance from the other genera(Thalassiosira,Conticribra,Planktoniella,Shinodiscus,and other genera)belonging to Thalassiosirales.Despite the similarities with some species of Thalassiosira,Conticribra,and Spicaticribra,the suite of features found in Lineaperpetua differentiate it from these other genera.These molecular data and morphological characters suggest an affinity of the new genus to the Thalassiosiraceae.
基金the Zhejiang Provincial Natural Science Foundation of China(No.LD21C030001)the National Natural Science Foundation of China(No.31970219)。
文摘A new filamentous cyanobacterial strain(CHAB 4127)was successfully isolated from the algal mat during the field investigation of the open channel from Luanhe River to Tianjin,China.The polyphasic approach combining morphological,ultrastructural,ecological,and molecular features was used to characterize this studied strain.The strain is morphologically similar to the Microcoleus-like cyanobacterial taxa under light microscopy,and the radial arrangement of thylakoids is also consistent with that of Microcoleus-like groups.The phylogenetic position of CHAB 4127 based on 16S rRNA gene sequences,is shown to be clearly clustered into an independent clade with the newly established genus Microcoleusiopsis.The maximum similarity of 16S r RNA gene of the studied strain with other existing related cyanobacterial taxa is 93.97%,and the ITS secondary structures is also obviously different from other members of Microcoleaceae.Based on all the above evidence,we proposed the establishment of this novel cyanobacterial genus as Neomicrocoleus,with its type species,Neomicrocoleus tianjinensis.
基金supported by the Strategic Priority Research Program of the Chinese Academy of Sciences (Grant No. XDA17010505)
文摘Earth’s near space,located in the region between 20 and 100 km above sea level,is characterized by extreme conditions,such as low temperature,low atmospheric pressure,harsh radiation,and extreme dryness.These conditions are analogous to those found on the surface of Mars and in the atmosphere of Venus,making Earth’s near space a unique natural laboratory for astrobiological research.To address essential astrobiological questions,teams from the Chinese Academy of Sciences(CAS)have developed a scientific balloon platform,the CAS Balloon-Borne Astrobiology Platform(CAS-BAP),to study the effects of near space environmental conditions on the biology and survival strategies of representative organisms in this terrestrial analog.Here,we describe the versatile Biological Samples Exposure Payload(BIOSEP)loaded on the CAS-BAP with respect to its structure and function.The primary function of BIOSEP is to expose appropriate biological specimens to the harsh conditions of near space and subsequently return the exposed samples to laboratories for further analysis.Four successful flight missions in near space from 2019 to 2021 have demonstrated the high reliability and efficiency of the payload in communicating between hardware and software units,recording environmental data,exposing sample containers,protecting samples from external contamination,and recovering samples.Understanding the effects of Earth’s near space conditions on biological specimens will provide valuable insights into the survival strategies of organisms in extreme environments and the search for life beyond Earth.The development of BIOSEP and associated biological exposure experiments will enhance our understanding of the potential for life on Mars and the habitability of the atmospheric regions of other planets in the solar system and beyond.