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Physiological and transcriptome analyses of Chinese cabbage in response to drought stress
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作者 Lin Chen Chao Li +7 位作者 Jiahao Zhang Zongrui Li Qi Zeng Qingguo Sun Xiaowu Wang Limin Zhao Lugang Zhang Baohua Li 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2024年第7期2255-2269,共15页
Chinese cabbage is an important leafy vegetable crop with high water demand and susceptibility to drought stress.To explore the molecular mechanisms underlying the response to drought,we performed a transcriptome anal... Chinese cabbage is an important leafy vegetable crop with high water demand and susceptibility to drought stress.To explore the molecular mechanisms underlying the response to drought,we performed a transcriptome analysis of drought-tolerant and-sensitive Chinese cabbage genotypes under drought stress,and uncovered core drought-responsive genes and key signaling pathways.A co-expression network was constructed by a weighted gene coexpression network analysis(WGCNA)and candidate hub genes involved in drought tolerance were identified.Furthermore,abscisic acid(ABA)biosynthesis and signaling pathways and their drought responses in Chinese cabbage leaves were systemically explored.We also found that drought treatment increased the antioxidant enzyme activities and glucosinolate contents significantly.These results substantially enhance our understanding of the molecular mechanisms underlying drought responses in Chinese cabbage. 展开更多
关键词 Chinese cabbage drought stress abscisic acid weighted gene co-expression network analysis GLUCOSINOLATE
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Application and Popularization of New Green Prevention and Control Technology for Greenhouse Vegetables in Shouguang City,Shandong Province
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作者 Zengwen LIANG Jinfeng WU +3 位作者 Jinling LI Zhaoxia YANG Junming LI Jinbo LI 《Asian Agricultural Research》 2019年第12期78-81,共4页
In recent years,through financial subsidies,Shouguang City has promoted the application of electrostatic sprayer,dual-purpose fog and mist sprinkler machine,Bacillus cereus,flame disinfection service based on fine rot... In recent years,through financial subsidies,Shouguang City has promoted the application of electrostatic sprayer,dual-purpose fog and mist sprinkler machine,Bacillus cereus,flame disinfection service based on fine rotary tillage and multi-functional plant protection machine and other new green prevention and control products and technologies for the greenhouse vegetable in the city. As a result,the utilization rate of pesticides was increased by more than 5%,and the application rate was reduced by more than 10%. 展开更多
关键词 GREENHOUSE VEGETABLES Green PREVENTION and CONTROL Shouguang CITY
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Effect of Low Light on the Characteristics of Photosynthesis and Chlorophyll a Fluorescence During Leaf Development of Sweet Pepper 被引量:23
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作者 SUI Xiao-lei MAO Sheng-li +2 位作者 WANG Li-hao ZHANG Bao-xi ZHANG Zhen-xian 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2012年第10期1633-1643,共11页
Low light stress is one of the main limiting factors which influence the production of sweet pepper under protected cultivation in China. In this experiment, two genotypes of sweet pepper, ShY (low light-tolerant gen... Low light stress is one of the main limiting factors which influence the production of sweet pepper under protected cultivation in China. In this experiment, two genotypes of sweet pepper, ShY (low light-tolerant genotype) and 20078 (low light-sensitive genotype), were used to study the effects of low light (photosynthetic photon flux density, PPFD was 75- 100 umol m-2 s-1, control 450-500 umol m-2 s-1) on photosynthesis during leaf development. The result indicated that under low light chlorophyll content, net photosynthetic rate (PN), photosynthetic apparent quantum efficiency (Фi) and carboxylation efficiency (CE) of sweet pepper leaves increased gradually and decreased after reaching the maximum levels. The time to reach the peak values for all the above parameters was delayed, whereas the light compensation point (LCP) decreased gradually along with leaf expansion. The decrease in maximum quantum yield of PS II (Fv/Fm) was not observed at any stages of the leaf development under low light condition, but the actual PS II efficiency under irradiance (ФPS II) was lower accompanied by an increased non-photochemical quenching (NPQ) in young and/or old leaves compared with mature leaves. The antenna thermal dissipation (D) was a main way of heat dissipation when young leaves received excessive light energy, while the decline in photosynthetic function in senescence leaf was mostly owing to the decrease in carbon assimilation capacity, followed by a significantly increased allocation of excessive energy (Ex). Compared with 20078, ShY could maintain higher PN, ФPS II and lower QA reduction state for a longer time during leaf development. Thus, in ShY photosynthetic efficiency and the activity of electron transport of PS II were not significantly affected due to low light stress. 展开更多
关键词 sweet pepper low light photosynthetic efficiency chlorophyll fluorescence leaf development
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Genetic diversity and population structure analysis of Capsicum germplasm accessions 被引量:13
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作者 GU Xiao-zhen CAO Ya-cong +6 位作者 ZHANG Zheng-hai ZHANG Bao-xi ZHAO Hong ZHANG Xiao-min WANG Hai-ping LI Xi-xiang WANG Li-hao 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2019年第6期1312-1320,共9页
Genetic diversity plays an essential role in plant breeding and utilization.Pepper is an important vegetable and spice crop worldwide.The genetic diversity of 1 904 accessions of pepper conserved at the National Mid-t... Genetic diversity plays an essential role in plant breeding and utilization.Pepper is an important vegetable and spice crop worldwide.The genetic diversity of 1 904 accessions of pepper conserved at the National Mid-term Genebank for Vegetables,Beijing,China was analyzed based on 29 simple sequence repeat(SSR)markers,which were evenly distributed over 12 pepper chromosomes.The pepper accessions were divided into two groups in a genetic structure analysis,and the two groups showed obvious differences in fruit type and geographical distribution.We finally selected 248 accessions capturing 75.6%of the SSR alleles as the core collection for further research.Insights into the genetic structure of pepper provide the basis for population-level gene mining and genetic improvement. 展开更多
关键词 CAPSICUM GERMPLASM SSR GENETIC diversity core COLLECTION
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Effect of exogenous GA3 on flowering quality, endogenous hormones, and hormone-and flowering-associated gene expression in forcing-cultured tree peony(Paeonia suffruticosa) 被引量:8
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作者 GUAN Yan-ren XUE Jing-qi +3 位作者 XUE Yu-qian YANG Ruo-wen WANG Shun-li ZHANG Xiu-xin 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2019年第6期1295-1311,共17页
Gibberellins(GAs)promote flowering in the forcing-cultured tree peony(Paeonia suffruticosa),however,the mechanism of regulating flowering is not fully understood.In this study,exogenous GA3 was applied to five-year-ol... Gibberellins(GAs)promote flowering in the forcing-cultured tree peony(Paeonia suffruticosa),however,the mechanism of regulating flowering is not fully understood.In this study,exogenous GA3 was applied to five-year-old Luoyang Hong plants to explore responses in terms of endogenous hormones,flowering quality,and the hormone-and flowering-associated gene expression.Exogenous GA3 application significantly promoted flower bud development and new branch growth,as well as improved flowering quality.Exogenous GA3 application also stimulated the synthesis of endogenous GA3 and indole-3-acetic acid(IAA)but reduced abscisic acid(ABA)levels.To further elucidate the regulatory mechanism,eight genes for GA biosynthesis and signaling,including PsCPS,PsKS,PsGA3ox,PsGA2ox,PsGID1b,PsGID1c,PsDELLA,and PsGID2 were cloned for the first time,and sequence analysis was also performed.The results suggested that all the cloned genes have conserved structure as each homologous gene reported in the other species.Phylogenetic trees constructed by the each cloned gene showed that the phylogenetic evolutionary relationship of P.suffruticosa was closely related to Vitis vinifera.The expression patterns of the above genes,and genes for ABA and IAA biosynthetic and signaling,and the flowering time were also investigated.Most of the above genes showed higher expression in the control buds than those in the GA3 treated buds at six developmental stages,whereas the expression levels of PsSOC1 and PsSPL9 were up-regulated by GA3 treatment.The results also showed that the GA-biosynthetic and signaling pathways are conserved in tree peony,and the PsCPS,PsGA3ox,PsGA2ox,PsGID1,PsDELLA,and PsGID2 genes are necessary for feedback regulation of GAs.Furthermore,hormone changes promoted PsSOC1 and PsSPL9 expression,and repressed PsSVP expression,which contributed to the improvement flowering quality in tree peony of forcing culture. 展开更多
关键词 tree PEONY FORCING culture HORMONES gibberellic acid GA biosynthesis and signaling FLOWERING QUALITY
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Inheritance of Powdery Mildew Resistance in Cucumber (Cucumis sativus L.) and Development of an AFLP Marker for Resistance Detection 被引量:8
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作者 ZHANG Su-qin GU Xing-fang +1 位作者 ZHANG Sheng-ping ZOU Zhi-rong 《Agricultural Sciences in China》 CAS CSCD 2007年第11期1336-1342,共7页
Cucumber powdery mildew is one of the most destructive diseases of cucumber throughout the world. In the present study, inheritance of powdery mildew resistance in three crosses, and linkage of resistance with amplifi... Cucumber powdery mildew is one of the most destructive diseases of cucumber throughout the world. In the present study, inheritance of powdery mildew resistance in three crosses, and linkage of resistance with amplified fragment length polymorphism (AFLP) markers are studied to formulate efficient strategies for breeding cultivars resistant to powdery mildew. The joint analysis of multiple generations and AFLP technique has been applied in this study. The best model is the one with two major genes, additive, dominant, and epistatic effects, plus polygenes with additive, dominant, and epistatic effects (E-l-0 model). The heritabilities of the major genes varied from 64.26% to 97.82%, and susceptibility was incompletely dominant for the two major genes in the three crosses studied. The additive effects of the two major genes and the dominant effect of the second major gene were high, and the epistatic effect of the additive-dominant between the two major genes was the highest in cross I . In cross II, the absolute value of the additive effect, dominant effect, and potential ratio of the first major gene were far higher than those of the second major gene, and the epistatic effect of the additive-additive was the highest. The genetic parameters of the two major genes in cross III were similar to those in cross II. Correlation and regression analyses showed that marker E25/M63-103 was linked to a susceptible gene controlling powdery mildew resistance. The marker could account for 19.98% of the phenotypic variation. When the marker was tested on a diverse set of 29 cucumber lines, the correlation between phenotype and genotype was not significant, which suggested cultivar specialty of gene expression or different methods of resistance to powdery mildew. The target DNA fragment was 103 bp in length, and only a small part was found to be homologous to DNA in the other species evaluated, which indicated that it was unique to the cucumber genome. 展开更多
关键词 cucumber (Cucumis sativus L.) powdery mildew resistance INHERITANCE amplified fragment lengthpolymorphism (AFLP) molecular marker
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Utilization of Ogura CMS germplasm with the clubroot resistance gene by fertility restoration and cytoplasm replacement in Brassica oleracea L 被引量:12
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作者 Wenjing Ren Zhiyuan Li +10 位作者 Fengqing Han Bin Zhang Xing Li Zhiyuan Fang Limei Yang Mu Zhuang Honghao Lv Yumei Liu Yong Wang Hailong Yu Yangyong Zhang 《Horticulture Research》 SCIE 2020年第1期1971-1980,共10页
Clubroot disease,a major plant root disease caused by Plasmodiophora brassicae,has become one of the most destructive diseases among cultivated cruciferous vegetables.However,clubroot-resistant Brassica oleracea mater... Clubroot disease,a major plant root disease caused by Plasmodiophora brassicae,has become one of the most destructive diseases among cultivated cruciferous vegetables.However,clubroot-resistant Brassica oleracea materials are rare.A few clubroot-resistant cabbage varieties are available on the market,but all are Ogura cytoplasmic male sterile(CMS)types.Therefore,in this study,to reutilize the clubroot-resistant Ogura CMS germplasm of cabbage,a new fertility-restored Ogura CMS material,16Q2-11,was used as a bridge to transfer the clubroot resistance(CR)gene from the Ogura CMS cytoplasm to the normal cytoplasm by a two-step method(a fertility restoration and cytoplasm replacement method).In the first cross for fertility restoration of Ogura CMS clubroot-resistant cabbage(FRCRC),16Q2-11 was used as a restorer to cross with Ogura CMS materials containing the CR gene CRb2.Eleven Rfo-positive progenies were generated,of which four contained CRb2:F8-514,F8-620,F8-732 and F8-839.After inoculation with race 4 of P.brassicae,these four CRb2-positive individuals showed resistance.Furthermore,F8-514 and F8-839 were then used as male parents in the second cross of FRCRC to cross with cabbage inbred lines,resulting in the successful introgression of the CRb2 gene into the inbred lines.All offspring produced from this step of cross,which had a normal cytoplasm,showed a high resistance to race 4 of P.brassicae and could be utilized for the breeding of clubrootresistant cabbage varieties in the future.This is the first time that the Ogura CMS restorer has been used to restore the fertility of Ogura CMS clubroot-resistant cabbages,which could improve germplasm diversity in cabbage and provide a reference method for using CMS germplasm in Brassica crops. 展开更多
关键词 FERTILITY GERMPLASM BREEDING
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Genome-wide analysis of expansins and their role in fruit spine development in cucumber(Cucumis sativus L.) 被引量:5
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作者 Xiaoping Liu Shaoyun Dong +5 位作者 Han Miao Kailiang Bo Caixia Li Yingying Yang Xingfang Gu Shengping Zhang 《Horticultural Plant Journal》 SCIE CAS CSCD 2022年第6期757-768,共12页
Cucumber is one of the most widely consumed vegetables worldwide,and the fruit spine is an important fruit quality trait.Expansins play critical roles in fruit development;however,the regulation of expansins in cucumb... Cucumber is one of the most widely consumed vegetables worldwide,and the fruit spine is an important fruit quality trait.Expansins play critical roles in fruit development;however,the regulation of expansins in cucumber fruit spine development has not been reported.In this study,33 expansin genes were identified in the cucumber genome V3;additionally,expansin genes in Citrullus lanatus,Cucumis melo,Cucurbita maxima,Lagenaria siceraria,and Benincasa hispida were also identified.Phylogenetic analysis of expansin proteins in Cucurbitaceae and Arabidopsis showed that they evolved separately in each plant species.Phylogenetic analysis showed that C.maxima was derived earlier than the other five Cucurbitaceae species.The expression of CsEXPA2,CsEXPA14,and CsEXLA3 varied in cucumber lines with different fruit spine densities.A yeast two-hybrid assay showed that a putative auxin transporter encoded by numerous spine gene(ns)interacts with CsEXLA2,which may be involved in the development of the numerous spines in cucumber.These results provide novel insights into the expansins related to plant development and fruit spine development in cucumber. 展开更多
关键词 CUCUMBER EXPANSINS Phylogenetic analysis COLLINEARITY Gene expression Fruit spine
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Synthesis,Crystal Structure,DFT Studies and Biological Activity of a Novel Schiff Base Containing Triazolo[4,3-a]pyridine Moiety 被引量:5
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作者 沈钟华 石延霞 +6 位作者 杨明艳 孙召慧 翁建全 谭成侠 刘幸海 李宝聚 赵卫光 《Chinese Journal of Structural Chemistry》 SCIE CAS CSCD 2016年第3期457-464,共8页
The novel Schiff base(E)-8-chloro-NA-(4-(dimethylamino)benzylidene)-[1,2,4]triazolo[4,3-a]pyridine-3-carbohydrazide was synthesized and characterized by ^1H NMR,MS,elemental analysis and X-ray diffraction.The co... The novel Schiff base(E)-8-chloro-NA-(4-(dimethylamino)benzylidene)-[1,2,4]triazolo[4,3-a]pyridine-3-carbohydrazide was synthesized and characterized by ^1H NMR,MS,elemental analysis and X-ray diffraction.The compound crystallizes in the monoclinic space group P2_1/c with a = 7.091(2),b = 10.750(3),c = 21.380(6) A,β = 96.299(6)°,V = 1619.7(8) A^3,Z = 4 and R = 0.0351.Theoretical calculation of the title compound was carried out with the B3LYP/6-31 G basis set.The frontier orbital energy and atomic net charges were discussed.It is found that the experimental data show good agreement with the calculated values.And the compound exhibits good antifungal activity against Stemphylium lycopersici(Enjoji) Yamamoto. 展开更多
关键词 1 2 4-triazolo[4 3-a]pyridine hydrazine synthesis crystal structure theoretical calculation antifungal activity
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Cloning and characterization of CaGID1s and CaGAI in Capsicum annuum L. 被引量:4
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作者 CAO Ya-cong ZHANG Zheng-hai +3 位作者 WANG Li-hao SUI Xiao-lei ZHANG Zhen-xian ZHANG Bao-xi 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2016年第4期775-784,共10页
Fruit set and development are affected by many phytohormones, including gibberellin. Little is known regarding molecular mechanism underlying gibberellin mediated fruit set and development especially in Capsicum. Thre... Fruit set and development are affected by many phytohormones, including gibberellin. Little is known regarding molecular mechanism underlying gibberellin mediated fruit set and development especially in Capsicum. Three gibberellin recep- tors, CaGIDlb.1, CaGIDlb.2 and CaGIDlc, and a DELLA protein, CaGAI, have been identified in Capsicum annuum L. During the fruit development, the expression level of CaGIDlc was low, and the expression fold change is mild. However, CaGIDlb. 1 and CaGIDlb.2 were relatively higher and more acute, which indicates that CaGIDlb. 1 and CaGID1b.2 may play an important role in fruit pericarp, placenta and seed. Ectopic expressions of CaGIDlb. 1, CaGIDlb.2 and CaGIDlc in Arabidopsis double mutant gidla gidlc increased plant height, among which CaGIDlb.2 had the most significant effect; CaGAI reduced plant height in double mutant rga-24/gai-t6, having a similar function to AtGID1 and AtGAI in stem elon- gation. Yeast two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays indicated that CaGIDlb.1 and CaGID1 b.2 interact with CaGAI in a GA-dependent manner, while CaGIDlc interacts with CaGAI in a GA-independent manner. Our study reveals the key elements during gibberellin signaling in Capsicum and supports the critical importance of gibberellin for Capsicum fruit set and development. 展开更多
关键词 Capsicum annuum L. FRUIT GID1 DELLA
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Over-Expression of Tomato GDP-Mannose Pyrophosphorylase (GMPase) in Potato Increases Ascorbate Content and Delays Plant Senescence 被引量:5
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作者 LIN Ling-ling SHI Qing-hua +2 位作者 WANG Hua-sen QIN Ai-guo YU Xian-chang 《Agricultural Sciences in China》 CAS CSCD 2011年第4期534-543,共10页
GDP-D-mannose pyrophosphorylase (GMPase) catalyses the synthesis of GDP-D-mannose and represents the first committed step in the synthesis of ascorbate. In the present study, the GMPase gene of tomato was introduced... GDP-D-mannose pyrophosphorylase (GMPase) catalyses the synthesis of GDP-D-mannose and represents the first committed step in the synthesis of ascorbate. In the present study, the GMPase gene of tomato was introduced into potato by Agrobacterium-mediated transformation. Two transgenic lines with higher GMPase expression were selected using qPCR and protein blot analyses. The results showed that the content of L-ascorbic acid (AsA) and the ratio of AsA/ DHA (dehydroascorbate) significantly increased in both leaves and tubers of transgenic potato plants. Both pigment content and photosynthetic rate were much higher in transgenic plants than in wild-type plants. Transgenic plants showed a distinguishable change in phenotype from the wild-type plants. Furthermore, transgenic plants showed delayed senescence. 展开更多
关键词 POTATO GDP-mannose pyrophosphorylase ASCORBATE SENESCENCE
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Comparison of DUS testing and SNP fingerprinting for variety identification in cucumber 被引量:5
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作者 Jian Zhang Jingjing Yang +6 位作者 Shenzao Fu Jun Ren XiaoFei Zhang Changxuan Xia Hong Zhao Kun Yang Changlong Wen 《Horticultural Plant Journal》 SCIE CAS CSCD 2022年第5期575-582,共8页
Variety identification plays an important role in protecting the intellectual property of varieties,ensuring seed quality,and encouraging breeding innovation.Currently,morphological evaluation in the field,such as dis... Variety identification plays an important role in protecting the intellectual property of varieties,ensuring seed quality,and encouraging breeding innovation.Currently,morphological evaluation in the field,such as distinctness,uniformity,and stability(DUS)testing,and DNA fingerprinting in the laboratory using molecular markers are two dominant methods used for variety identification.Few studies have compared the results of these approaches,and the relationship between the two methods is obscure.In this study,134 dominant cucumber varieties were evaluated using 50 DUS testing traits and genotyped by 40 single nucleotide polymorphisms(SNPs).The 40 SNPs were developed in our previous study and arewell suited for variety identification.In the DUS testing,significant positive or negative correlations among 50 DUS traits were observed,and 20 core traits,including 15 fruit traits,were further selected to increase field inspection efficiency.This suggested that fruit shape plays an important role in variety identification.The ratio of fruit length/diameter was themost important trait,explaining 9.2%of the phenotypic variation.In the DNA fingerprinting test,the 40 SNPs were highly polymorphic and could distinguish all of the 134 cucumber varieties,and 14 core SNPs were selected to improve the identification rate.Interestingly,the population structure analysis of 134 cucumber varieties by phenotypic data in the DUS test was in accordance with the genotypic data from the DNA fingerprinting,indicating that all varieties could be divided into the same four subgroups:European type,North China type,South China type,and hybrids of the North China and South China types.Moreover,linear correlativity of distinguishment for each pair of varieties was observed between the DUS test and the DNA fingerprinting.These results indicated that these two methods have good application in future research,especially for the scaled-up analysis of hundreds of varieties. 展开更多
关键词 CUCUMBER DUS test SNP fingerprinting Variety identification
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Genetic diversity and population structure analysis of 161 broccoli cultivars based on SNP markers 被引量:4
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作者 Jingjing Huang Yumei Liu +8 位作者 Fengqing Han Zhiyuan Fang Limei Yang Mu Zhuang Yangyong Zhang Honghao Lv Yong Wang Jialei Ji Zhansheng Li 《Horticultural Plant Journal》 SCIE CSCD 2021年第5期423-433,共11页
To better understand the genetic diversity and population structure of broccoli cultivars planted in China,a total of 161 representative broccoli cultivars in the past 25 years were collected and analysed based on sin... To better understand the genetic diversity and population structure of broccoli cultivars planted in China,a total of 161 representative broccoli cultivars in the past 25 years were collected and analysed based on single nucleotide polymorphism(SNP)markers.Ten pairs of primers with good polymorphism and high resolution were screened from 315 pairs of SNP primers by 3 broccoli accessions(inbred lines)with different phenotypes and maturity.The 10 pairs of SNP primers were selected,producing 78 alleles.The diversity analysis indicated that the polymorphism information content(PIC)of SNP primer ranged from 0.64 to 0.90.The observed number of alleles(Na)was 2.00,the effective number of alleles(Ne)was 1.11–2.00,the Nei’s gene diversity(H)was 0.10–0.50,and Shannon information index(I)was 0.20–0.70 using PopGene32 software.The clustering results showed that the 161 broccoli cultivars could be divided into 4 major subgroups(A,B,C and D),foreign cultivars were all assigned to subgroup A,and domestic cultivars were assigned to 3 subgroups of B,C,and D.This study indicated that some domestic cultivars and foreign cultivars were similar in genetic background,but most domestic cultivars were still different from the Japanese cultivars.When K=2,the population structure result presented that 161 broccoli cultivars could be divided into 1 simple group(2 groups)and 1 mixed group.When Q≥0.6,143(88.82%)broccoli cultivars belonged to the simple groups.In simple groups 68(42.24%)broccoli cultivars of group 1 were derived from Japan,the United States,Switzerland,the Netherlands,China-Taiwan,and China-Mainland;75(46.58%)broccoli cultivars belonged to group 2;when Q<0.6,18(11.18%)broccoli cultivars belonged to the mixed groups.This study is helpful to understand the diversity and resolution of broccoli cultivars from worldwide,which is beneficial to plant breeding and materials innovation.And meanwhile,this result is also used for construction of broccoli fingerprint serving for cultivar identification. 展开更多
关键词 BROCCOLI Genetic diversity Population structure analysis FINGERPRINT SNP
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Comparative Analysis of Population Genetic Structure in Bemisia tabaci(Gennadius) Biotypes B and Q Based on ISSR Marker 被引量:4
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作者 CHU Dong WAN Fang-hao +2 位作者 XU Bao-yun WU Qing-jun ZHANG You-jun 《Agricultural Sciences in China》 CAS CSCD 2008年第11期1348-1354,共7页
Bemisia tabaci (Gennadius) biotypes B and Q are two invasive biotypes in the species complex. The comparison of the population genetic structure of the two biotypes is of significance to show their invasive mechanis... Bemisia tabaci (Gennadius) biotypes B and Q are two invasive biotypes in the species complex. The comparison of the population genetic structure of the two biotypes is of significance to show their invasive mechanism and to their control. The intersimple sequence repeats (ISSR) marker was used to analyze the 16 B-biotype populations and 4 Q-biotype populations worldwide with a Trialeurodes vaporariorum population in Shanxi Province, China, and a B. tabaci non-B/Qbiotype population in Zhejiang Province, China, was used as control populations. The analysis of genetic diversity showed that the diversity indexes of biotype Q including Nei's gene diversity index, Shannon informative index, and the percentage of polymorphic loci were higher than those of biotype B. The high genetic diversity of biotype Q might provide the genetic basis for the excellent ecological adaptation. Cluster analysis suggested that the ISSR could not be used in the phylogenetic analysis though it could easily distinguish the biotypes of B. tabaci. The difference of the population genetic structure between the biotype B and the biotype Q exists based on the ISSR marker. Meanwhile, the results suggested that the molecular marker has its limitation in the phylogenetic analysis among the biotypes of B. tabaci. 展开更多
关键词 invasive mechanism Bemisia tabaci biotype B Bemisia tabaci biotype Q genetic structure ISSR
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Molecular cloning and functional analysis of the pepper resistance gene Me3 to root-knot nematode 被引量:3
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作者 Yang Liu Hongyi Cao +5 位作者 Jian Ling Yuhong Yang Yan Li Bingyan Xie Jianlong Zhao Zhenchuan Mao 《Horticultural Plant Journal》 SCIE CAS CSCD 2023年第1期133-144,共12页
Root-knot nematodes(RKNs)cause severe diseases in peppers annually around the world.In pepper,the Me3 gene provides a heat-stable and broad-spectrum resistance to RKNs.In this study,several simple sequence repeat(SSR)... Root-knot nematodes(RKNs)cause severe diseases in peppers annually around the world.In pepper,the Me3 gene provides a heat-stable and broad-spectrum resistance to RKNs.In this study,several simple sequence repeat(SSR)markers and insertion/deletion(In Del)markers were developed to fine map the Me3 gene.Analysis of 2272 individuals(F2progenies)revealed that Me3 was located in a 45-kb DNA region between markers SSR784 and SSR339,in which there were three candidate genes.Among them,as a novel nucleotide binding site and leucine rich repeat(NBS-LRR)family gene,the DNA sequence of Capana09g000163 of pepper line‘HDA149’was 6348 bp in length,with a 2802-bp open reading frame encoding 933 amino acids,including NB-ARC and LRR domains.Tobacco transient expression assays demonstrated that expression of Capana09g000163 triggered a hypersensitive response(HR)in Nicotiana benthamiana leaves.Subcellular localization results showed that the Capana09g000163 protein was localized in the cell nucleus.Ectopic expression of Capana09g000163 in Arabidopsis significantly increased resistance against Meloidogyne incognita compared with the wild-type(WT)Arabidopsis.Furthermore,M.incognita was almost unable to develop in transgenic Arabidopsis expressing Capana09g000163.Taken together,we cloned the Me3 gene and verified that it induced resistance against M.incognita with the methods of map-based cloning and transgenic technology,which may be of great significance to pepper breeding for resistance against RKNs. 展开更多
关键词 Capsicum annuum L Meloidogyne incognita Nematode-resistant gene Fine mapping Transgenic technology
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Cloning of Proteinase Inhibitor Gene StPI in Diploid Potato and Its Expression Analysis 被引量:3
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作者 LI Guang-cun JINLi-ping +2 位作者 XIE Kai-yun LI Ying QU Dong-yu 《Agricultural Sciences in China》 CAS CSCD 2007年第11期1315-1321,共7页
A full-length cDNA of proteinase inhibitor gene with completed open reading frame of 116 amino acids was cloned from Ralstonia solanacearum (Rs) resistant potato leaves using the rapid amplification of cDNA ends (R... A full-length cDNA of proteinase inhibitor gene with completed open reading frame of 116 amino acids was cloned from Ralstonia solanacearum (Rs) resistant potato leaves using the rapid amplification of cDNA ends (RACE) method and designated as StPI. BLAST search against NCBI showed that the StPI gene shared 89% identity with potato proteinase inhibitor I precursor in nucleotide and 74% in amino acid. Analysis of semi-quantitative RT-PCR indicated that this gene was induced by Rs as well as up-regulated by jasmonic acid (JA). The StPI gene expression reached the highest level during 6-12 h post Rs-inoculation or JA-treatment, and then leveled off. Moreover, this gene was strongly induced by JA and its mRNA accumulation increased more quickly than that of Rs-inoculation. The StPI gene may play a role in potato resistance against Rs. The induction of StPI by Rs invasion may have a similar signal transduction pathway with JA treatment. 展开更多
关键词 potato bacterial wilt RACE StPI gene full-length cDNA gene expression
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Development and Evaluation of a Loop-mediated Isothermal Amplification Assay for the Rapid Detection and Identification of Pectobacterium carotovorum on Celery in the Field 被引量:3
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作者 Yanxia Shi Zhiwen Jin +4 位作者 Xianglong Meng Lixue Wang Xuewen Xie Ali Chai Baoju Li 《Horticultural Plant Journal》 SCIE 2020年第5期313-320,共8页
Pectobacterium carotovorum is the causal agent of bacterial soft rot in a wide range of vegetable host species.Once P.carotovorum infects the plant,the spread of the disease is difficult to control.In this study,a rap... Pectobacterium carotovorum is the causal agent of bacterial soft rot in a wide range of vegetable host species.Once P.carotovorum infects the plant,the spread of the disease is difficult to control.In this study,a rapid and sensitive method based on loop-mediated isothermal amplification(LAMP)was developed for detecting P.carotovorum in celery with soft rot using a primer set designed from the pmrA conserved sequence of P.carotovorum.The specificity of the LAMP primer set for P.carotovorum was extensively validated on both P.carotovorum strains and nontarget strains.The sensitivity was 1 pg of P.carotovorum genomic DNA,which demonstrated 10 times more sensitive than the conventional PCR assay.LAMP was also used to detect P.carotovorum in bacterial suspension.The lowest detection concentration was 104 CFU·mL^−1.In addition,a LAMP assay,in conjunction with a crude DNA extraction method,was successfully performed on P.carotovorum-infected samples derived from both artificially and naturally infected plants.In summary,the LAMP assay established in this study constitutes a simple,sensitive,and rapid method for the detection of P.carotovorum,and has potential application in the control of celery soft rot disease through early detection. 展开更多
关键词 Bacterial soft rot P.carotovorum Loop-mediated isothermal amplification(LAMP) CELERY pmrA gene field detection
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Whole-genome sequencing provides insights into the genetic diversity and domestication of bitter gourd(Momordica spp.) 被引量:8
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作者 Junjie Cui Yan Yang +21 位作者 Shaobo Luo Le Wang Rukui Huang Qingfang Wen Xiaoxia Han Nansheng Miao Jiaowen Cheng Ziji Liu Changyuan Zhang Chengcheng Feng Haisheng Zhu Jianwen Su Xinjian Wan Fang Hu Yu Niu Xiaoming Zheng Yulan Yang Dai Shan Zhensheng Dong Weiming He Narinder P.S.Dhillon Kailin Hu 《Horticulture Research》 SCIE 2020年第1期1758-1768,共11页
Bitter gourd(Momordica charantia)is a popular cultivated vegetable in Asian and African countries.To reveal the characteristics of the genomic structure,evolutionary trajectory,and genetic basis underlying the domesti... Bitter gourd(Momordica charantia)is a popular cultivated vegetable in Asian and African countries.To reveal the characteristics of the genomic structure,evolutionary trajectory,and genetic basis underlying the domestication of bitter gourd,we performed whole-genome sequencing of the cultivar Dali-11 and the wild small-fruited line TR and resequencing of 187 bitter gourd germplasms from 16 countries.The major gene clusters(Bi clusters)for the biosynthesis of cucurbitane triterpenoids,which confer a bitter taste,are highly conserved in cucumber,melon,and watermelon.Comparative analysis among cucurbit genomes revealed that the Bi cluster involved in cucurbitane triterpenoid biosynthesis is absent in bitter gourd.Phylogenetic analysis revealed that the TR group,including 21 bitter gourd germplasms,may belong to a new species or subspecies independent from M.charantia.Furthermore,we found that the remaining 166 M.charantia germplasms are geographically differentiated,and we identified 710,412,and 290 candidate domestication genes in the South Asia,Southeast Asia,and China populations,respectively.This study provides new insights into bitter gourd genetic diversity and domestication and will facilitate the future genomics-enabled improvement of bitter gourd. 展开更多
关键词 INSIGHT cluster WHOLE
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Molecular basis of heterosis and related breeding strategies reveal its importance in vegetable breeding 被引量:4
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作者 Daoliang Yu Xingfang Gu +4 位作者 Shengping Zhang Shaoyun Dong Han Miao Kiros Gebretsadik Kailiang Bo 《Horticulture Research》 SCIE 2021年第1期1834-1850,共17页
Heterosis has historically been exploited in plants;however,its underlying genetic mechanisms and molecular basis remain elusive.In recent years,due to advances in molecular biotechnology at the genome,transcriptome,p... Heterosis has historically been exploited in plants;however,its underlying genetic mechanisms and molecular basis remain elusive.In recent years,due to advances in molecular biotechnology at the genome,transcriptome,proteome,and epigenome levels,the study of heterosis in vegetables has made significant progress.Here,we present an extensive literature review on the genetic and epigenetic regulation of heterosis in vegetables.We summarize six hypotheses to explain the mechanism by which genes regulate heterosis,improve upon a possible model of heterosis that is triggered by epigenetics,and analyze previous studies on quantitative trait locus effects and gene actions related to heterosis based on analyses of differential gene expression in vegetables.We also discuss the contributions of yield-related traits,including flower,fruit,and plant architecture traits,during heterosis development in vegetables(e.g.,cabbage,cucumber,and tomato).More importantly,we propose a comprehensive breeding strategy based on heterosis studies in vegetables and crop plants.The description of the strategy details how to obtain F_(1) hybrids that exhibit heterosis based on heterosis prediction,how to obtain elite lines based on molecular biotechnology,and how to maintain heterosis by diploid seed breeding and the selection of hybrid simulation lines that are suitable for heterosis research and utilization in vegetables.Finally,we briefly provide suggestions and perspectives on the role of heterosis in the future of vegetable breeding. 展开更多
关键词 BREEDING ELITE HETEROSIS
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Synthesis,Crystal Structure,DFT Studies and Antifungal Activity of 5-(4-Cyclopropyl-5-((3-fluorobenzyl)sulfonyl)-4H-1,2,4-triazol-3-yl)-4-methyl-1,2,3-thiadiazole 被引量:3
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作者 翟志文 石延霞 +6 位作者 杨明艳 孙召慧 翁建全 谭成侠 刘幸海 李宝聚 张永刚 《Chinese Journal of Structural Chemistry》 SCIE CAS CSCD 2016年第1期25-33,共9页
5-(4-Cyclopropyl-5-((3-fluorobenzyl)sulfonyl)-4H-1,2,4-triazol-3-yl)-4-methyl-1,2,3-thiadiazole was synthesized and recrystallized from Et OH. The compound was characterized by ^1H NMR,MS,elemental analysis and ... 5-(4-Cyclopropyl-5-((3-fluorobenzyl)sulfonyl)-4H-1,2,4-triazol-3-yl)-4-methyl-1,2,3-thiadiazole was synthesized and recrystallized from Et OH. The compound was characterized by ^1H NMR,MS,elemental analysis and X-ray diffraction. The structure-active relationship and the antifungal activity based on density functional theory calculation(DFT) and antifungal activities were investigated. The compound crystallizes in the monoclinic space group P121/n1 with a = 8.929(3),b=12.715(4),c=15.161(5) A°,β = 106.142(3)o,V = 1653.3(9) A°3,Z = 4 and R = 0.0393 for 3930 observed reflections with I 〉 2σ(I). Theoretical calculation of the title compound was carried out with B3LYP/6-31G(d,p). The full geometry optimization was carried out using the 6-31G(d,p) basis set.The frontier orbital energy and atomic net charges were discussed. The observed results of the compound have been compared with theoretical results and the experimental data show good agreement with the calculated values. The compound exhibits good antifungal activity. 展开更多
关键词 1 2 3-thiadiazole 1 2 4-triazole synthesis crystal structure theoretical calculation antifungal activity
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