A three-dimensional （3D） reconstruction of icosahedral virus is carried out by the icosahedral symmetry-adapted function （ISAF） method in spherical coordinates. In order to reduce the influence of noise, it is bet...A three-dimensional （3D） reconstruction of icosahedral virus is carried out by the icosahedral symmetry-adapted function （ISAF） method in spherical coordinates. In order to reduce the influence of noise, it is better to use the basis functions that have identical symmetry with the object reconstructed. It is verified that the ISAF method has stronger ability to reduce the influence of noise to grain the resolution better than that of the conventional method by the simulation of 3D reconstruction.展开更多
Three-dimensional(3 D)reconstruction of icosahedral viruses has played a crucial role in the development of cryoelectron microscopy single-particle reconstruction,with many cryo-electron microscopy techniques first es...Three-dimensional(3 D)reconstruction of icosahedral viruses has played a crucial role in the development of cryoelectron microscopy single-particle reconstruction,with many cryo-electron microscopy techniques first established for structural studies of icosahedral viruses,owing to their high symmetry and large mass.This review summarizes the computational methods for icosahedral and symmetry-mismatch reconstruction of viruses,as well as the likely challenges and bottlenecks in virus reconstruction,such as symmetry mismatch reconstruction,contrast transformation function(CTF)correction,and particle distortion.展开更多
文摘A three-dimensional （3D） reconstruction of icosahedral virus is carried out by the icosahedral symmetry-adapted function （ISAF） method in spherical coordinates. In order to reduce the influence of noise, it is better to use the basis functions that have identical symmetry with the object reconstructed. It is verified that the ISAF method has stronger ability to reduce the influence of noise to grain the resolution better than that of the conventional method by the simulation of 3D reconstruction.
基金Project supported by the National Key R&D Program of China(Grant No.2016YFA0501100)the National Natural Science Foundation of China(Grant Nos.91530321,31570742,and 31570727)Science and Technology Planning Project of Hunan Province,China(Grant No.2017RS3033)
文摘Three-dimensional(3 D)reconstruction of icosahedral viruses has played a crucial role in the development of cryoelectron microscopy single-particle reconstruction,with many cryo-electron microscopy techniques first established for structural studies of icosahedral viruses,owing to their high symmetry and large mass.This review summarizes the computational methods for icosahedral and symmetry-mismatch reconstruction of viruses,as well as the likely challenges and bottlenecks in virus reconstruction,such as symmetry mismatch reconstruction,contrast transformation function(CTF)correction,and particle distortion.
