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Catch-bond behavior of DNA condensate under tension 被引量:1
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作者 李伟 Wong Wei-Juan +4 位作者 Lim Ci-Ji 车海鹏 李明 严洁 《Chinese Physics B》 SCIE EI CAS CSCD 2015年第12期105-108,共4页
Toroid formation is an important mechanism underlying DNA condensation, which has been investigated extensively by single-molecule experiments in vitro. Here, the de-condensation dynamics of DNA condensates were studi... Toroid formation is an important mechanism underlying DNA condensation, which has been investigated extensively by single-molecule experiments in vitro. Here, the de-condensation dynamics of DNA condensates were studied using magnetic tweezers combined with Brownian dynamics simulations. The experimental results revealed a surprising nonmonotonic dependence of the unfolding rate on the force applied under strong adhesion conditions, resembling the catchbond behavior reported in the field of ligand-receptor interactions. Simulation results showed that the different unfolding pathways of DNA condensate under large forces derive from the force-dependent deformation of the DNA toroid, which explains the catch-bond behavior of DNA condensate in the magnetic tweezers experiments. These results challenge the universality of the regular toroidal DNA unwrapping mechanism and provide the most complete description to date of multivalent cation-dependent DNA unwrapping under tension. 展开更多
关键词 DNA toroid magnetic tweezers catch bond
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Interaction between human telomeric G-quadruplexes characterized by single molecule magnetic tweezers
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作者 王一舟 侯锡苗 +5 位作者 车海鹏 肖雪 奚绪光 窦硕星 李伟 《Chinese Physics B》 SCIE EI CAS CSCD 2018年第6期543-553,共11页
Human telomeric G-quadruplex plays a crucial role in regulating the genome stability. Despite extensive studies on structures and kinetics of monomeric G-quadruplex, the interaction between G-quadruplexes is still in ... Human telomeric G-quadruplex plays a crucial role in regulating the genome stability. Despite extensive studies on structures and kinetics of monomeric G-quadruplex, the interaction between G-quadruplexes is still in debate. In this work,we employ magnetic tweezers to investigate the folding and unfolding kinetics of two contiguous G-quadruplexes in 100-mM K~+buffer. The interaction between G-quadruplexes and the consequent effect on the kinetics of G-quadruplex are revealed. The linker sequence between G-quadruplexes is further found to play an important role in the interaction between two G-quadruplexes. Our results provide a high-resolution insight into kinetics of multimeric G-quadruplexes and genome stability. 展开更多
关键词 BIOPHYSICS G-QUADRUPLEXES single-molecule studies DNA structures
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